Miyakogusa Predicted Gene
- Lj4g3v0258610.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0258610.1 tr|A9RPM8|A9RPM8_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,44.83,0.000000000000003,HYPOTHETICAL MEMBRANE PROTEIN,NULL;
FAMILY NOT NAMED,NULL; Cytochrom_B561,Cytochrome b561,
eukaryote,CUFF.46755.1
(184 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g08990.1 280 5e-76
Glyma05g26030.1 256 9e-69
Glyma08g42090.1 168 2e-42
Glyma18g13200.1 156 1e-38
Glyma02g45440.1 143 1e-34
Glyma14g03370.1 70 2e-12
Glyma15g12240.1 64 1e-10
Glyma09g01390.1 64 1e-10
Glyma10g11800.1 62 4e-10
Glyma18g30900.1 60 2e-09
Glyma17g01170.1 58 4e-09
Glyma07g39630.1 56 2e-08
Glyma14g00960.1 54 1e-07
Glyma02g47700.1 52 3e-07
Glyma08g13720.1 51 7e-07
Glyma05g30560.1 50 1e-06
Glyma05g30570.1 50 2e-06
Glyma18g08860.1 50 2e-06
Glyma08g43970.1 49 4e-06
>Glyma08g08990.1
Length = 266
Score = 280 bits (717), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 140/187 (74%), Positives = 150/187 (80%), Gaps = 3/187 (1%)
Query: 1 MHLSCRRVYFVMVSFYISVLPFTECTAFEE---VXXXXXXXXXXXXXXHQKTSDIAVHGL 57
MH+ C+ +Y V+ SFY SVL F+ C A+EE QKTSDIAVHGL
Sbjct: 1 MHILCKPIYIVVASFYASVLLFSHCMAYEEEHHSSSHKSTNNKIYKVNQQKTSDIAVHGL 60
Query: 58 LLWASMGFLMPLGILTIRGSNKAEPGSRRGRVLFYLHVVFQMLSVLLATVGAAMSLKKFE 117
LLWAS GFLMPLGIL IRGS KAEPGSRR VLFYLHV FQMLSVLLATVGAAMSLKKFE
Sbjct: 61 LLWASTGFLMPLGILIIRGSIKAEPGSRRSIVLFYLHVGFQMLSVLLATVGAAMSLKKFE 120
Query: 118 NSFDNNHQRLGLALYAAILAQAFIGFFRPHRGKKERSYWYLIHWILGTIVSLVGIINIYT 177
NSFDN+HQ+LGLALY AIL Q IGFFRPHRGKKERSYWYL+HWILGTIVSLVGIINIYT
Sbjct: 121 NSFDNSHQKLGLALYGAILVQGLIGFFRPHRGKKERSYWYLLHWILGTIVSLVGIINIYT 180
Query: 178 GLKAYHQ 184
GLKAYH+
Sbjct: 181 GLKAYHK 187
>Glyma05g26030.1
Length = 227
Score = 256 bits (654), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 123/139 (88%), Positives = 129/139 (92%)
Query: 46 HQKTSDIAVHGLLLWASMGFLMPLGILTIRGSNKAEPGSRRGRVLFYLHVVFQMLSVLLA 105
QKTSDIAVHGLLLWAS GFLMPLGIL I+GS KAEPGSRR +VLFYLHV FQMLSVLLA
Sbjct: 10 QQKTSDIAVHGLLLWASTGFLMPLGILIIKGSIKAEPGSRRSKVLFYLHVGFQMLSVLLA 69
Query: 106 TVGAAMSLKKFENSFDNNHQRLGLALYAAILAQAFIGFFRPHRGKKERSYWYLIHWILGT 165
TVGAAMSLKKFENSFDN+HQ+LGLALY AIL Q IGFFRPHRGKKERSYWYL+HWILGT
Sbjct: 70 TVGAAMSLKKFENSFDNSHQKLGLALYGAILVQGLIGFFRPHRGKKERSYWYLLHWILGT 129
Query: 166 IVSLVGIINIYTGLKAYHQ 184
IVSLVGIINIYTGLKAYH+
Sbjct: 130 IVSLVGIINIYTGLKAYHK 148
>Glyma08g42090.1
Length = 252
Score = 168 bits (426), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 80/134 (59%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
Query: 51 DIAVHGLLLWASMGFLMPLGILTIRGSNKAEPGSRRGRVLFYLHVVFQMLSVLLATVGAA 110
I +HG LLWASMGFLMP+GIL IR SN+ E +R R+LFY+H + QM++VLLAT GA
Sbjct: 55 QITLHGFLLWASMGFLMPVGILAIRLSNR-EKNPKRHRILFYVHSILQMIAVLLATAGAI 113
Query: 111 MSLKKFENSFDNNHQRLGLALYAAILAQAFIGFFRPHRGKKERSYWYLIHWILGTIVSLV 170
MS+K F N F+N+HQRLG+ALY I Q +G FRP RG K RS W+ HWILGT V+ +
Sbjct: 114 MSIKNFNNLFNNSHQRLGVALYGVIWLQVLLGIFRPQRGSK-RSVWFFAHWILGTAVTFL 172
Query: 171 GIINIYTGLKAYHQ 184
G++N+Y GL AYHQ
Sbjct: 173 GVLNVYLGLGAYHQ 186
>Glyma18g13200.1
Length = 191
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/133 (59%), Positives = 96/133 (72%), Gaps = 8/133 (6%)
Query: 52 IAVHGLLLWASMGFLMPLGILTIRGSNKAEPGSRRGRVLFYLHVVFQMLSVLLATVGAAM 111
I +HG LLWASMGFLMP+GIL IR SN+ E +R RVLFY M++VLLAT GA M
Sbjct: 1 ITLHGFLLWASMGFLMPVGILAIRLSNREE-SPKRHRVLFY------MIAVLLATAGAIM 53
Query: 112 SLKKFENSFDNNHQRLGLALYAAILAQAFIGFFRPHRGKKERSYWYLIHWILGTIVSLVG 171
S+K F N F+N+HQRLG+ALY I Q +G FRP RG K RS W+ HWILGT V+ +G
Sbjct: 54 SIKNFNNLFNNSHQRLGVALYGVIWLQVLLGIFRPQRGSK-RSVWFFAHWILGTAVTFLG 112
Query: 172 IINIYTGLKAYHQ 184
++N+Y GL AYHQ
Sbjct: 113 VLNVYLGLGAYHQ 125
>Glyma02g45440.1
Length = 201
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/134 (57%), Positives = 97/134 (72%), Gaps = 7/134 (5%)
Query: 51 DIAVHGLLLWASMGFLMPLGILTIRGSNKAEPGSRRGRVLFYLHVVFQMLSVLLATVGAA 110
+I +HG LLWASM FLMP+GIL IR SN+ E RR R++FY L+VLLAT GA
Sbjct: 38 EITLHGFLLWASMAFLMPVGILVIRLSNRDE-NRRRLRIIFY------KLAVLLATAGAI 90
Query: 111 MSLKKFENSFDNNHQRLGLALYAAILAQAFIGFFRPHRGKKERSYWYLIHWILGTIVSLV 170
MS+K F NSF+NNHQRLG+ALY I Q +G FRP RG K RS W+ HWI+GT VSL+
Sbjct: 91 MSIKNFNNSFNNNHQRLGVALYGIIWLQVLVGIFRPQRGSKRRSLWFFAHWIMGTAVSLL 150
Query: 171 GIINIYTGLKAYHQ 184
G++N++ GL+AY +
Sbjct: 151 GVLNVFIGLQAYQE 164
>Glyma14g03370.1
Length = 203
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 37/51 (72%)
Query: 98 QMLSVLLATVGAAMSLKKFENSFDNNHQRLGLALYAAILAQAFIGFFRPHR 148
+ L+VLLAT GA MS+K F NSF NNHQRLG+ALY I Q +G FRP R
Sbjct: 42 KKLAVLLATAGAIMSIKSFNNSFSNNHQRLGVALYCIIWLQVLVGIFRPQR 92
>Glyma15g12240.1
Length = 406
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 54 VHGLLLWASMGFLMPLGILTIRGSN---KAEPGSRRGRVLFYLHVVFQMLSVLLATVGAA 110
VHG+L S G LMP+G + R A+P FYLHV Q + ++ G
Sbjct: 214 VHGVLNALSWGILMPVGAIIARYLKVFKSADP------AWFYLHVTCQTSAYIVGVAGWG 267
Query: 111 MSLKKFENSFD---NNHQRLGLALYAAILAQAFIGFFRPHRGKKERSYWYLIHWILGTIV 167
LK +S N H+ LG+ L+ Q F RP++ K R YW + H+ +G
Sbjct: 268 TGLKLGSDSVGIKYNTHRALGITLFCLGTLQVFALLLRPNKDHKIRIYWNIYHYAVGYST 327
Query: 168 SLVGIINIYTGLKA 181
++ IIN++ G A
Sbjct: 328 IIISIINVFKGFDA 341
>Glyma09g01390.1
Length = 404
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 54 VHGLLLWASMGFLMPLGILTIR---GSNKAEPGSRRGRVLFYLHVVFQMLSVLLATVGAA 110
VHG+L S G LMP+G + R A+P FYLHV Q + ++ G
Sbjct: 212 VHGVLNALSWGILMPVGAIIARYLKVFKSADP------AWFYLHVTCQTSAYIVGVAGWG 265
Query: 111 MSLKKFENSFD---NNHQRLGLALYAAILAQAFIGFFRPHRGKKERSYWYLIHWILGTIV 167
LK +S N H+ LG+ L+ Q F RP++ K R YW + H+ +G
Sbjct: 266 TGLKLGSDSVGIKYNTHRALGITLFCLGTLQVFALLLRPNKDHKIRIYWNIYHYAVGYST 325
Query: 168 SLVGIINIYTGLKA 181
++ IIN++ G A
Sbjct: 326 IIISIINVFKGFDA 339
>Glyma10g11800.1
Length = 86
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%)
Query: 93 LHVVFQMLSVLLATVGAAMSLKKFENSFDNNHQRLGLALYAAILAQAFIGFFRPHR 148
L +VF + +AT GA MS+K F N F+N+HQRLG+ALY I Q +G FRP R
Sbjct: 31 LKLVFSIRYNYIATAGAIMSIKNFNNLFNNSHQRLGVALYGVIWLQVLLGIFRPQR 86
>Glyma18g30900.1
Length = 394
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 54 VHGLLLWASMGFLMPLGILT---IRGSNKAEPGSRRGRVLFYLHVVFQMLSVLLATVGAA 110
VHG+L S G L PLG++ +R A+P FYLHV Q+ + + G
Sbjct: 207 VHGILNAVSWGVLFPLGVIVARYMRTFPSADP------AWFYLHVGCQVSAYAIGVAGWG 260
Query: 111 MSLKKFENSFD---NNHQRLGLALYAAILAQAFIGFFRPHRGKKERSYWYLIHWILGTIV 167
+K S +H+ +G+AL+ Q F F RP + K R W + H +G +
Sbjct: 261 TGMKLGSESVGIQYRSHRYIGIALFCFATLQVFALFLRPVKDHKYRYIWNIYHHSVGYSI 320
Query: 168 SLVGIINIYTGLKAYH 183
++GIINI+ G H
Sbjct: 321 VILGIINIFRGFSILH 336
>Glyma17g01170.1
Length = 400
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 12/137 (8%)
Query: 54 VHGLLLWASMGFLMPLGILTIR---GSNKAEPGSRRGRVLFYLHVVFQMLSVLLATVGAA 110
HG+L S G LMP G + R A+P FYLH+ Q + ++ G
Sbjct: 208 THGVLNAVSWGILMPTGAIIARYLKVFKSADP------TWFYLHITCQASAYIVGVSGLG 261
Query: 111 MSLKKFENSFD---NNHQRLGLALYAAILAQAFIGFFRPHRGKKERSYWYLIHWILGTIV 167
LK +S + H+ LG+ L Q F F RP++ K R YW + H ++G
Sbjct: 262 TGLKLGSDSEGVDYDTHRALGIVLVCLGTLQVFALFLRPNKDHKYRVYWNVYHHLVGYAT 321
Query: 168 SLVGIINIYTGLKAYHQ 184
++ ++NI+ G + +
Sbjct: 322 IIISVVNIFEGFETIEK 338
>Glyma07g39630.1
Length = 402
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 54 VHGLLLWASMGFLMPLGILTIR---GSNKAEPGSRRGRVLFYLHVVFQMLSVLLATVGAA 110
HG+L S G LMP G + R A+P FYLH+ Q + ++ G
Sbjct: 210 THGVLNAVSWGILMPTGAIIARYLKVFKSADP------AWFYLHITCQASAYIVGVSGFG 263
Query: 111 MSLKKFENSFD---NNHQRLGLALYAAILAQAFIGFFRPHRGKKERSYWYLIHWILGTIV 167
LK +S + H+ LG+ L Q F F RP++ + R YW + H ++G
Sbjct: 264 TGLKLGSDSEGVEYDTHRALGIVLVCLGTLQVFALFLRPNKDHRYRVYWNVYHHLVGYAT 323
Query: 168 SLVGIINIYTGLK 180
++ ++N++ G
Sbjct: 324 IIISVVNVFKGFD 336
>Glyma14g00960.1
Length = 392
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 54 VHGLLLWASMGFLMPLGILTIRGSNKAEPGSRRGRVLFYLHVVFQMLSVLLATVGAAMSL 113
+HG + S G L+P+G +T R + G FY H Q+ +L TVG + +
Sbjct: 212 IHGTVNAISWGILLPMGAITARYLRHIQ---ALGPAWFYAHAGIQLFGFVLGTVGFVIGI 268
Query: 114 KKFENSFDNN---HQRLGLALYAAILAQAFIGFFRPHRGKKERSYWYLIHWILGTIVSLV 170
+ + S H++LG+A++ Q FRP+ K R YW H +G ++
Sbjct: 269 RLGQLSPGVEYRLHRKLGMAVFCLGALQTLALLFRPNTRNKFRKYWKSYHHFVGYSCVVL 328
Query: 171 GIINIYTGLK 180
G +N++ G +
Sbjct: 329 GFVNVFQGFE 338
>Glyma02g47700.1
Length = 397
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 54 VHGLLLWASMGFLMPLGILTIRGSNKAEPGSRRGRVLFYLHVVFQMLSVLLATVGAAMSL 113
+HG + S G L+P+G +T R + G FY H Q+ +L TVG + +
Sbjct: 212 IHGTVNAISWGILLPMGAITARYLRHIQ---ALGPAWFYAHAGMQVFGFVLGTVGFVIGI 268
Query: 114 KKFENSFDNN---HQRLGLALYAAILAQAFIGFFRPHRGKKERSYWYLIHWILGTIVSLV 170
+ + S H++LG+A++ Q FRP+ K R YW H +G ++
Sbjct: 269 RLGQLSPGVEYRLHRKLGMAVFCLGGLQTLALLFRPNTRNKFRKYWKSYHHFVGYSCVVL 328
Query: 171 GIINIYTGLK 180
G +N++ G +
Sbjct: 329 GFVNVFQGFE 338
>Glyma08g13720.1
Length = 608
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 52 IAVHGLLLWASMGFLMPLGILTIRGSNKAEPGSRRGRVLFYLHVVFQ---MLSVLLATVG 108
+AVHG +++ + G L+P GIL R +G + +HV Q ++ VLLA +
Sbjct: 427 LAVHGFMMFIAWGILLPGGILAARYLKHL-----KGDGWYRIHVYLQYSGLVIVLLALLF 481
Query: 109 AAMSLKKFENSFDNNHQRLGLALYAAILAQAFIGFFRPHR------GKKERSYWYLIHWI 162
A L+ F F + H + G A Q F RP + +R W H I
Sbjct: 482 AVAELRGF--YFSSAHVKCGFATILLACIQPVNAFLRPQKPANGEQASSKRVIWEYFHGI 539
Query: 163 LGTIVSLVGIINIYTGLK 180
+G +VGI ++TG+K
Sbjct: 540 VGRCAVVVGIAALFTGMK 557
>Glyma05g30560.1
Length = 878
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 16/138 (11%)
Query: 52 IAVHGLLLWASMGFLMPLGILTIRGSNKAEPGSRRGRVLFYLHVVFQ---MLSVLLATVG 108
+AVHG +++ + G L P GIL R +G + +HV Q ++ VLLA +
Sbjct: 658 LAVHGFMMFVAWGILFPGGILAARYLKHL-----KGDGWYRIHVYLQYSGLVIVLLALLF 712
Query: 109 AAMSLKKFENSFDNNHQRLGLA--LYAAIL-AQAFIGFFRPHRGKK---ERSYWYLIHWI 162
A L+ F F + H + G A L A I A AF+ +P G++ +R W H I
Sbjct: 713 AVAELRGF--YFSSTHVKFGFATILLACIQPANAFLRPPKPANGEQASSKRVIWECFHTI 770
Query: 163 LGTIVSLVGIINIYTGLK 180
+G +VGI ++TG+K
Sbjct: 771 VGRCAIVVGIAALFTGMK 788
>Glyma05g30570.1
Length = 267
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 16/138 (11%)
Query: 52 IAVHGLLLWASMGFLMPLGILTIRGSNKAEPGSRRGRVLFYLHVVFQ---MLSVLLATVG 108
+AVHG +++ + G L P GIL R +G + +HV Q ++ VLLA +
Sbjct: 94 LAVHGFMMFVAWGILFPGGILAARYLKHL-----KGDGWYRIHVYLQYSGLVIVLLALLF 148
Query: 109 AAMSLKKFENSFDNNHQRLGLA--LYAAIL-AQAFIGFFRPHRGKK---ERSYWYLIHWI 162
A L+ F F + H + G A L A I A AF+ +P G++ +R W H I
Sbjct: 149 AVAELRGF--YFSSTHVKFGFATILLACIQPANAFLRPPKPANGEQASSKRVIWECFHTI 206
Query: 163 LGTIVSLVGIINIYTGLK 180
+G +VGI ++TG+K
Sbjct: 207 VGRCAIVVGIAALFTGMK 224
>Glyma18g08860.1
Length = 356
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 54 VHGLLLWASMGFLMPLGILTIRGSNKAEPGSRRGRVLFYLHVVFQMLSVLL--ATVGAAM 111
VHG+L S G LMP+G++ R KA G G F LH Q L+ L+ A G +
Sbjct: 191 VHGVLNTISWGVLMPIGVILAR-YLKAFDG--LGPTWFQLHRACQSLAFLMGIAGFGTGL 247
Query: 112 SLKKFENSFDNNHQRLGLALYAAILAQAFIG-FFRPHRGKKERSYWYLIHWILGTIVSLV 170
+ + H+ +G+ L + Q + F RP + K R +W + H+I+G + +
Sbjct: 248 YIGNHYGIHNAPHRCVGITLLCLAITQVCLAVFLRPKKDHKYRMFWNIFHYIVGYSIIAL 307
Query: 171 GIINIYTGLK 180
+ N++ G
Sbjct: 308 AVWNVFKGFD 317
>Glyma08g43970.1
Length = 372
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 54 VHGLLLWASMGFLMPLGILTIRGSNKAEPGSRRGRVLFYLHVVFQMLS--VLLATVGAAM 111
VHG+L S G LMP+G++ R + G F+LH Q L+ + +A G +
Sbjct: 213 VHGILNTISWGILMPIGVILAR---YLKVFDGLGPTWFHLHRACQSLAFFIGIAGFGTGL 269
Query: 112 SLKKFENSFDNNHQRLGLALYAAILAQAFIG-FFRPHRGKKERSYWYLIHWILGTIVSLV 170
+ + H+ +G+ L + Q + F RP + K R +W + H+++G + +
Sbjct: 270 YIGNHYGVHNAPHRCVGITLLCLAIIQVCVAVFLRPKKDHKYRMFWNIFHYLVGYSIIAL 329
Query: 171 GIINIYTGLK 180
I N++ G +
Sbjct: 330 AIWNVWKGFE 339