Miyakogusa Predicted Gene

Lj4g3v0258600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0258600.1 Non Chatacterized Hit- tr|I3SUQ0|I3SUQ0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98,0,RIBOSOMAL_S11,Ribosomal S11, conserved site; 40S RIBOSOMAL
PROTEIN S14,NULL; 40S RIBOSOMAL PROTEIN S,CUFF.46802.1
         (150 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g10210.1                                                       247   4e-66
Glyma19g42720.1                                                       246   7e-66
Glyma19g42700.1                                                       246   7e-66
Glyma13g28840.1                                                       246   7e-66
Glyma03g40130.1                                                       246   7e-66
Glyma03g40110.1                                                       246   7e-66
Glyma13g28840.2                                                       223   6e-59
Glyma03g40130.2                                                       193   5e-50
Glyma03g40130.3                                                       129   8e-31

>Glyma15g10210.1 
          Length = 150

 Score =  247 bits (630), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 123/139 (88%), Positives = 126/139 (90%)

Query: 1   MSKRKVREPKEDNVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK 60
           MS+RKVREPKE+NVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK
Sbjct: 1   MSRRKVREPKEENVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK 60

Query: 61  VKADRDESSPYAAMLAAQDVATRCKELGITALHIRLRAXXXXXXXXXXXXAQAALRALAR 120
           VKADRDESSPYAAMLAAQDVA RCKELGITALHIRLRA            AQ+ALRALAR
Sbjct: 61  VKADRDESSPYAAMLAAQDVAARCKELGITALHIRLRATGGNKTKTPGPGAQSALRALAR 120

Query: 121 SGMKIGRIEDVTPIPSDST 139
           SGMKIGRIEDVTPIPSDST
Sbjct: 121 SGMKIGRIEDVTPIPSDST 139


>Glyma19g42720.1 
          Length = 150

 Score =  246 bits (627), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 122/139 (87%), Positives = 126/139 (90%)

Query: 1   MSKRKVREPKEDNVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK 60
           MS+RKVREPKE+NVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK
Sbjct: 1   MSRRKVREPKEENVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK 60

Query: 61  VKADRDESSPYAAMLAAQDVATRCKELGITALHIRLRAXXXXXXXXXXXXAQAALRALAR 120
           VKADRDESSPYAAMLAAQDVA RCKELGITALHI+LRA            AQ+ALRALAR
Sbjct: 61  VKADRDESSPYAAMLAAQDVAARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120

Query: 121 SGMKIGRIEDVTPIPSDST 139
           SGMKIGRIEDVTPIPSDST
Sbjct: 121 SGMKIGRIEDVTPIPSDST 139


>Glyma19g42700.1 
          Length = 150

 Score =  246 bits (627), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 122/139 (87%), Positives = 126/139 (90%)

Query: 1   MSKRKVREPKEDNVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK 60
           MS+RKVREPKE+NVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK
Sbjct: 1   MSRRKVREPKEENVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK 60

Query: 61  VKADRDESSPYAAMLAAQDVATRCKELGITALHIRLRAXXXXXXXXXXXXAQAALRALAR 120
           VKADRDESSPYAAMLAAQDVA RCKELGITALHI+LRA            AQ+ALRALAR
Sbjct: 61  VKADRDESSPYAAMLAAQDVAARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120

Query: 121 SGMKIGRIEDVTPIPSDST 139
           SGMKIGRIEDVTPIPSDST
Sbjct: 121 SGMKIGRIEDVTPIPSDST 139


>Glyma13g28840.1 
          Length = 150

 Score =  246 bits (627), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 122/139 (87%), Positives = 126/139 (90%)

Query: 1   MSKRKVREPKEDNVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK 60
           MS+RKVREPKE+NVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK
Sbjct: 1   MSRRKVREPKEENVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK 60

Query: 61  VKADRDESSPYAAMLAAQDVATRCKELGITALHIRLRAXXXXXXXXXXXXAQAALRALAR 120
           VKADRDESSPYAAMLAAQDVA RCKELGITALHI+LRA            AQ+ALRALAR
Sbjct: 61  VKADRDESSPYAAMLAAQDVAARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120

Query: 121 SGMKIGRIEDVTPIPSDST 139
           SGMKIGRIEDVTPIPSDST
Sbjct: 121 SGMKIGRIEDVTPIPSDST 139


>Glyma03g40130.1 
          Length = 150

 Score =  246 bits (627), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 122/139 (87%), Positives = 126/139 (90%)

Query: 1   MSKRKVREPKEDNVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK 60
           MS+RKVREPKE+NVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK
Sbjct: 1   MSRRKVREPKEENVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK 60

Query: 61  VKADRDESSPYAAMLAAQDVATRCKELGITALHIRLRAXXXXXXXXXXXXAQAALRALAR 120
           VKADRDESSPYAAMLAAQDVA RCKELGITALHI+LRA            AQ+ALRALAR
Sbjct: 61  VKADRDESSPYAAMLAAQDVAARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120

Query: 121 SGMKIGRIEDVTPIPSDST 139
           SGMKIGRIEDVTPIPSDST
Sbjct: 121 SGMKIGRIEDVTPIPSDST 139


>Glyma03g40110.1 
          Length = 150

 Score =  246 bits (627), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 122/139 (87%), Positives = 126/139 (90%)

Query: 1   MSKRKVREPKEDNVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK 60
           MS+RKVREPKE+NVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK
Sbjct: 1   MSRRKVREPKEENVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK 60

Query: 61  VKADRDESSPYAAMLAAQDVATRCKELGITALHIRLRAXXXXXXXXXXXXAQAALRALAR 120
           VKADRDESSPYAAMLAAQDVA RCKELGITALHI+LRA            AQ+ALRALAR
Sbjct: 61  VKADRDESSPYAAMLAAQDVAARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120

Query: 121 SGMKIGRIEDVTPIPSDST 139
           SGMKIGRIEDVTPIPSDST
Sbjct: 121 SGMKIGRIEDVTPIPSDST 139


>Glyma13g28840.2 
          Length = 133

 Score =  223 bits (568), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 111/130 (85%), Positives = 116/130 (89%)

Query: 1   MSKRKVREPKEDNVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK 60
           MS+RKVREPKE+NVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK
Sbjct: 1   MSRRKVREPKEENVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK 60

Query: 61  VKADRDESSPYAAMLAAQDVATRCKELGITALHIRLRAXXXXXXXXXXXXAQAALRALAR 120
           VKADRDESSPYAAMLAAQDVA RCKELGITALHI+LRA            AQ+ALRALAR
Sbjct: 61  VKADRDESSPYAAMLAAQDVAARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 120

Query: 121 SGMKIGRIED 130
           SGMKIGRI +
Sbjct: 121 SGMKIGRIGN 130


>Glyma03g40130.2 
          Length = 130

 Score =  193 bits (491), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 102/139 (73%), Positives = 106/139 (76%), Gaps = 20/139 (14%)

Query: 1   MSKRKVREPKEDNVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMK 60
           MS+RKVREPKE+NVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRIT    
Sbjct: 1   MSRRKVREPKEENVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRIT---- 56

Query: 61  VKADRDESSPYAAMLAAQDVATRCKELGITALHIRLRAXXXXXXXXXXXXAQAALRALAR 120
                           AQDVA RCKELGITALHI+LRA            AQ+ALRALAR
Sbjct: 57  ----------------AQDVAARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALAR 100

Query: 121 SGMKIGRIEDVTPIPSDST 139
           SGMKIGRIEDVTPIPSDST
Sbjct: 101 SGMKIGRIEDVTPIPSDST 119


>Glyma03g40130.3 
          Length = 92

 Score =  129 bits (325), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 66/81 (81%), Positives = 68/81 (83%)

Query: 59  MKVKADRDESSPYAAMLAAQDVATRCKELGITALHIRLRAXXXXXXXXXXXXAQAALRAL 118
           MKVKADRDESSPYAAMLAAQDVA RCKELGITALHI+LRA            AQ+ALRAL
Sbjct: 1   MKVKADRDESSPYAAMLAAQDVAARCKELGITALHIKLRATGGNKTKTPGPGAQSALRAL 60

Query: 119 ARSGMKIGRIEDVTPIPSDST 139
           ARSGMKIGRIEDVTPIPSDST
Sbjct: 61  ARSGMKIGRIEDVTPIPSDST 81