Miyakogusa Predicted Gene

Lj4g3v0216630.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0216630.1 Non Chatacterized Hit- tr|K4CBD0|K4CBD0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,55.43,3e-19,
,CUFF.46702.1
         (103 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g04400.1                                                       176   4e-45
Glyma02g44410.1                                                       173   4e-44
Glyma13g04000.1                                                       148   1e-36

>Glyma14g04400.1 
          Length = 103

 Score =  176 bits (447), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 87/104 (83%), Positives = 94/104 (90%), Gaps = 2/104 (1%)

Query: 1   MWHLLAAVTRNLHNTRKSSKVADENMFQQGNTVEMFGHERGRRQHGWGLVLSILQAPMSM 60
           MW LLAAV RNL NTRKSSKVADE+MF+ GN VE+FGHERGRRQHGWGLV SILQAP+S+
Sbjct: 1   MWRLLAAVARNLQNTRKSSKVADESMFEAGNGVELFGHERGRRQHGWGLVCSILQAPISI 60

Query: 61  LSCVSHPQV-NGPDGVWVTGGEFSQISEMNYLMVSDSMRYAILM 103
           LSCVS PQV NG DGVWVT GEFSQ+SEMN+LMVSDSMRYAILM
Sbjct: 61  LSCVSQPQVNNGSDGVWVT-GEFSQVSEMNHLMVSDSMRYAILM 103


>Glyma02g44410.1 
          Length = 120

 Score =  173 bits (438), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 86/107 (80%), Positives = 96/107 (89%), Gaps = 4/107 (3%)

Query: 1   MWHLLAAVTRNLHNTRKSSKVADENMFQQGNTVEMFGHERGRR-QHGWGLVLSILQAPMS 59
           MW +LAAVTRNL +TRKSSKVADE+MF+ GN VE+FGHERGRR QHGWGLV SILQAP+S
Sbjct: 14  MWRVLAAVTRNLQSTRKSSKVADESMFESGNGVELFGHERGRRSQHGWGLVCSILQAPIS 73

Query: 60  MLSCVSHPQV--NGPDGVWVTGGEF-SQISEMNYLMVSDSMRYAILM 103
           +LSCVSHPQV  NG DG+WVT GEF SQ+SEMN+LMVSDSMRYAILM
Sbjct: 74  ILSCVSHPQVNNNGSDGIWVTTGEFSSQVSEMNHLMVSDSMRYAILM 120


>Glyma13g04000.1 
          Length = 107

 Score =  148 bits (374), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 74/108 (68%), Positives = 86/108 (79%), Gaps = 6/108 (5%)

Query: 1   MWHLLAAVTRNLHNTRKSSKVADENMFQQGNTVE--MFGHERGRRQHGWG---LVLSILQ 55
           MW L+AA+TR L NT+K S+VADENMF+  N VE  MF H+RGRR HGW    L+  IL 
Sbjct: 1   MWRLVAALTRKLQNTKKGSRVADENMFEAANGVELAMFRHDRGRRDHGWSGISLIYGILH 60

Query: 56  APMSMLSCVSHPQVNGPDGVWVTGGEFSQISEMNYLMVSDSMRYAILM 103
           AP+S+LSCVSHPQ NG DGVWV+ GEF QISEMN+LMV+DSMRYAILM
Sbjct: 61  APISILSCVSHPQANGSDGVWVS-GEFVQISEMNHLMVNDSMRYAILM 107