Miyakogusa Predicted Gene

Lj4g3v0200060.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0200060.1 Non Chatacterized Hit- tr|I0YI33|I0YI33_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,28.37,1e-18,Nucleotid_trans,Nucleotide-diphospho-sugar transferase;
seg,NULL; UNCHARACTERIZED,NULL; RETICULON,Re,CUFF.46638.1
         (354 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g09360.1                                                       545   e-155
Glyma08g38860.1                                                        59   9e-09
Glyma20g00870.1                                                        53   5e-07
Glyma18g20860.1                                                        51   2e-06
Glyma03g25600.1                                                        49   9e-06

>Glyma08g09360.1 
          Length = 356

 Score =  545 bits (1405), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 280/357 (78%), Positives = 292/357 (81%), Gaps = 4/357 (1%)

Query: 1   MSSFLHQRS-LTNPLSNPFPVSSPSTNSKKPIS-IXXXXXXXXXXXXXXXXXXXCPWVGM 58
           MSSFLHQRS L NP SNPFP S+PS+++ K    I                   CPWVG 
Sbjct: 1   MSSFLHQRSSLQNPFSNPFPASTPSSSNSKKSLSIMGPTTLLALISLIVILGVFCPWVGF 60

Query: 59  PYGLSFTSKPAVSKWGHYTLEQALSFVARNGT-VIVCIVSQPYLPFLNNWLISISMQKRQ 117
           P G  FT  P  SKW HYTLEQALSFVA+NG+ VIVCIVSQPYLPFLNNWLISISMQKRQ
Sbjct: 61  PQGFPFTPTPT-SKWAHYTLEQALSFVAKNGSSVIVCIVSQPYLPFLNNWLISISMQKRQ 119

Query: 118 DMVLVIAEDYYSLYKVNELWPGHAVLIPPVLEAEDAHKFGSKGFFNFTARRPSHLLKILE 177
           DMVLVIAEDY SL +VN LWPGHAVLIPPVL+AE AHKFGS+GFFNFTARRPSHLLKILE
Sbjct: 120 DMVLVIAEDYASLDRVNLLWPGHAVLIPPVLDAEAAHKFGSQGFFNFTARRPSHLLKILE 179

Query: 178 HGYSVMYNDVDMVWLADPFPYLVGNHDVYFTDDMTEIKPLNHSHDLPPPGKKGRPYICSC 237
            GYSVMYNDVDMVWLADPFPYL GNHDVYFTDDMT IKPLNHSHDLPPPGKKGRPYICSC
Sbjct: 180 LGYSVMYNDVDMVWLADPFPYLQGNHDVYFTDDMTAIKPLNHSHDLPPPGKKGRPYICSC 239

Query: 238 MIFLHPTDGSXXXXXXXXXXXXXQPWSRTKKSNDQPAFNWALMKNAKEVDLYLLPQPAFP 297
           MIFL PT+G+             QPWS+T KSNDQPAFNWALMKNAKEVDLYLLPQ AFP
Sbjct: 240 MIFLRPTNGAKLILRKWIEELQIQPWSKTVKSNDQPAFNWALMKNAKEVDLYLLPQAAFP 299

Query: 298 TGGLYFKNKTWVKETKGKHVIIHNNYIVGFEKKIKRFRDYGLWLVDDHAKESPLGTL 354
           TGGLYFKNK WVKETKG HVIIHNNYIVGFEKKIKRFRDYGLWLVDDHA ESPLG L
Sbjct: 300 TGGLYFKNKAWVKETKGMHVIIHNNYIVGFEKKIKRFRDYGLWLVDDHAHESPLGGL 356


>Glyma08g38860.1 
          Length = 551

 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 114/290 (39%), Gaps = 40/290 (13%)

Query: 76  YTLEQALSFVA-RNGTVIVCIVSQPYLPFLNNWLISISMQKRQDMVLVIAEDYYSLYKVN 134
           ++LE  LS  + +  TVI+ +    Y   L +W+  +     ++ V+   +   S + + 
Sbjct: 274 FSLESLLSITSDKTKTVILTVAGYSYKDMLMSWVCRLRKLSIENFVVCALDKETSQFSIL 333

Query: 135 ELWPGHAVLIPPVLEAEDAHKFGSKGFFNFTARRPSHLLKILEHGYSVMYNDVDMVWLAD 194
           +  P     I P   + D   FG+K F   T  +   +LKIL+ GY+V+ +DVD+ W  +
Sbjct: 334 QGIPVFTDPIAPSNISFDDCHFGTKCFQRVTKVKSRIVLKILKLGYNVLLSDVDVYWFKN 393

Query: 195 PFPYLVGNHDVYF---TDDMTEIKPLNHSHDLPPPGKKGRPYICSCMIFLHPTDGSXXXX 251
           P P L           +D+     P+N    LP     G         F +    S    
Sbjct: 394 PVPLLHSLGPAVLAAQSDEYQNQGPIN----LPRRLNSG---------FYYARSDSQTIA 440

Query: 252 XXXXXXXXXQPWSRTKKSNDQPAFNWALMKNA--------------KEVDLYLLPQPAFP 297
                    +    T   ++QP+F   L  N                 + ++ L +  F 
Sbjct: 441 AIEKVVRHAE----TSGLSEQPSFYDTLCGNGGSNRVGDDKCVEPETNLTVHFLDRDLFA 496

Query: 298 TGGL--YFKNKTWVKET--KGKHVIIHNNYIVGFEKKIKRFRDYGLWLVD 343
            G     ++ K  VKE   K    IIHNN+I G  KK++R    GLW  D
Sbjct: 497 NGAYQDLWREKN-VKEACLKKGSYIIHNNWISGRLKKLERQVLSGLWEYD 545


>Glyma20g00870.1 
          Length = 340

 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 14/146 (9%)

Query: 76  YTLEQALSFVA-RNGTVIVCIVSQPYLP-------FLNNWLISISMQKRQDMVLVIAEDY 127
           Y+LE  L+  A ++ TVI+  +++ +         FL ++ I    ++  + +++IA D 
Sbjct: 44  YSLENILNEAAMQDRTVILTTLNEAWAATNSIIDLFLESFRIGDRTRRLLNHLVIIALDQ 103

Query: 128 YSLYKVNELWPGHAVLIPPVLEAEDAHK---FGSKGFFNFTARRPSHLLKILEHGYSVMY 184
            +  +   +   H      V EA D HK   F +  +     RR   L  +LE GY+ ++
Sbjct: 104 KAFMRCQAI---HTYCYLLVNEATDFHKEAYFMTPSYLKMMWRRIDFLRSVLEMGYNFVF 160

Query: 185 NDVDMVWLADPFPYLVGNHDVYFTDD 210
            DVD++W  DPFP+   + D     D
Sbjct: 161 TDVDIMWFRDPFPWFHRDADFQIACD 186


>Glyma18g20860.1 
          Length = 437

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 101/274 (36%), Gaps = 60/274 (21%)

Query: 87  RNGTVIVCIVSQPYLPFLNNWLISISMQKRQDMVLVIAEDYYSLYKVNELWPGHAVLIPP 146
           +  TVI+ I    Y   L +W+  +     ++ ++   +     + + +  P     I P
Sbjct: 202 KTKTVILTIAGYSYKDMLMSWVCRLQKLSIENFIVYALDKETYQFSILQGIPVFTDPIAP 261

Query: 147 VLEAEDAHKFGSKGFFNFTARRPSHLLKILEHGYSVMYNDVDMVWLADPFPYL------- 199
              + D   FG+K F   T  +   +LKIL+ GY+V+ +DVD+ W  +P P L       
Sbjct: 262 SNVSFDDCHFGTKCFQRVTKVKSRIVLKILKLGYNVLLSDVDVYWFKNPVPLLHSFGPAV 321

Query: 200 -------VGNHDVYFTDDMTEIKPLNHSHDLPPPGKKGRPYICSCMIFLHPTDGSXXXXX 252
                      D YFT ++   + L+    +   G   R     CM              
Sbjct: 322 LAVQSDEYQKQDAYFTPEIHVGQRLSQLQ-IYWNGGSNRVGDNKCM-------------- 366

Query: 253 XXXXXXXXQPWSRTKKSNDQPAFNWALMKNAKEVDLYLLPQPAFPTGGLY-FKNKTWVKE 311
                              +P  N         + ++ L +  FP G     + +  VKE
Sbjct: 367 -------------------EPETN---------LTVHFLARDHFPNGAYQELQREKNVKE 398

Query: 312 T--KGKHVIIHNNYIVGFEKKIKRFRDYGLWLVD 343
              K    IIHNN+I G  KK++R    GLW  D
Sbjct: 399 AGLKKGSYIIHNNWISGRLKKLERQVLSGLWEYD 432


>Glyma03g25600.1 
          Length = 283

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 20/151 (13%)

Query: 88  NGTVIVCIVSQPYLP------------FLNNWLISISMQKRQDMVLVIAEDYYSLYKVNE 135
           N TVI+ +V++ Y+             FL ++ +    +   D +L++A D  +  +   
Sbjct: 14  NKTVIIAVVNKAYVDQDVESDTTMLDIFLGSFWLGEGTRSLIDHLLLVAVDQTAYDRCQF 73

Query: 136 LWPGHAVLIPPVLEAEDAHKFGSKGFFNFTARRPSHLLKILEHGYSVMYNDVDMVWLADP 195
           L      L    ++ +    + S+ F     RR   LL++L+ GY+ ++ D D++WL +P
Sbjct: 74  LKLNCFKLETDGVDFKGEKIYMSQDFIKMMWRRTFFLLEVLKRGYNFVFTDTDVMWLRNP 133

Query: 196 FPYLVGNH--------DVYFTDDMTEIKPLN 218
           F  L  N         D Y  D   E  P+N
Sbjct: 134 FTRLSKNETEDLQISTDAYLGDPWLEKNPIN 164