Miyakogusa Predicted Gene
- Lj4g3v0190050.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0190050.2 Non Chatacterized Hit- tr|B8AEM4|B8AEM4_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,61.8,1e-18,SUBFAMILY NOT NAMED,NULL; CCR4-NOT TRANSCRIPTION
COMPLEX RELATED,NULL; seg,NULL; ZF_RING_2,Zinc fing,CUFF.46637.2
(349 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma17g10190.1 251 1e-66
Glyma05g01690.1 249 4e-66
Glyma13g19940.1 68 1e-11
Glyma10g05590.1 68 1e-11
Glyma15g04950.1 68 2e-11
Glyma13g40460.1 68 2e-11
Glyma11g15670.1 65 1e-10
>Glyma17g10190.1
Length = 337
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 127/168 (75%), Positives = 133/168 (79%), Gaps = 10/168 (5%)
Query: 182 KNQCPCSDLPPSHDEHVGQTVPPRAAANGSDSNSKPASGRLVPWGSGNVRAWRADDAFRP 241
K + PC D PP V P +N NSKP SGRL PWGSGN RAWRADDAFRP
Sbjct: 180 KRENPCPDSPP--------VVSPSEGSNLGSPNSKPESGRLFPWGSGNSRAWRADDAFRP 231
Query: 242 QSLPNLSKQHSMPNPDRYCGGVPWSPNSAPSSCPICFEDLDLTDTSFLPCLCGFRLCLFC 301
QSLPNLSKQHSMPNPDR GVPW PSSCPIC EDLDLTDTSF+PCLCGFRLCLFC
Sbjct: 232 QSLPNLSKQHSMPNPDRR--GVPWGRAPTPSSCPICCEDLDLTDTSFMPCLCGFRLCLFC 289
Query: 302 HKRILEDDGRCPGCRKPYEREPVETEASVVGGSLTLRLARSCSMIERA 349
HKRILE+DGRCPGCRKPYE EPVETEASV+G SLTLRLARSCSMIER+
Sbjct: 290 HKRILEEDGRCPGCRKPYECEPVETEASVLGDSLTLRLARSCSMIERS 337
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 67/97 (69%), Positives = 74/97 (76%), Gaps = 3/97 (3%)
Query: 1 MVSDXXXXXXXXXXXNTKNPGKKKRTNRSAKLKQYKIDARREQWLNQGAVKSKGCKDGVD 60
MVSD NT+NPGKKKRTNRSAKLKQYKIDARREQWL+QGAVKSKG KDG+D
Sbjct: 1 MVSDSIAAVPIPSAANTRNPGKKKRTNRSAKLKQYKIDARREQWLSQGAVKSKGYKDGLD 60
Query: 61 DDGHALPSPAAGKQGKGSLQQLEMRREGDEDDGLIHQ 97
DDGHA PSPA + K S++ L RR G+EDDGLIH
Sbjct: 61 DDGHAPPSPA---EVKHSVEPLNTRRRGEEDDGLIHH 94
>Glyma05g01690.1
Length = 332
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 127/168 (75%), Positives = 133/168 (79%), Gaps = 10/168 (5%)
Query: 182 KNQCPCSDLPPSHDEHVGQTVPPRAAANGSDSNSKPASGRLVPWGSGNVRAWRADDAFRP 241
K + PC D PP V P +N NSKP S LVPWGSGN RAWRADDAFRP
Sbjct: 175 KRENPCPDSPP--------VVSPSEGSNLGSPNSKPESDGLVPWGSGNSRAWRADDAFRP 226
Query: 242 QSLPNLSKQHSMPNPDRYCGGVPWSPNSAPSSCPICFEDLDLTDTSFLPCLCGFRLCLFC 301
QSLPNLSKQHSMPNPDR GVPW PSSCPIC EDLDLTDTSF+PCLCGFRLCLFC
Sbjct: 227 QSLPNLSKQHSMPNPDRR--GVPWGRAPTPSSCPICCEDLDLTDTSFMPCLCGFRLCLFC 284
Query: 302 HKRILEDDGRCPGCRKPYEREPVETEASVVGGSLTLRLARSCSMIERA 349
HKRILE+DGRCPGCRKPYE EPVETEASV+GGSLTLRLARSCSMIER+
Sbjct: 285 HKRILEEDGRCPGCRKPYECEPVETEASVLGGSLTLRLARSCSMIERS 332
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/98 (72%), Positives = 74/98 (75%), Gaps = 4/98 (4%)
Query: 1 MVSDXXXXXXXXXXXNTKNPGKKKRTNRSAKLKQYKIDARREQWLNQGAVKSKGCKDGVD 60
MVSD NTKNPGKKKRTNRSAKLKQYKIDARREQWL+QGAVKSKGCKDGVD
Sbjct: 1 MVSDSIAAVPIPSAANTKNPGKKKRTNRSAKLKQYKIDARREQWLSQGAVKSKGCKDGVD 60
Query: 61 DDGHA-LPSPAAGKQGKGSLQQLEMRREGDEDDGLIHQ 97
DDGHA PSPA K SL+ L RR G+EDDGLIH
Sbjct: 61 DDGHAPPPSPAVVKH---SLEPLNTRRRGEEDDGLIHH 95
>Glyma13g19940.1
Length = 358
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 6/63 (9%)
Query: 273 SCPICFEDLDLTDTSFLPCLCGFRLCLFCHKRIL------EDDGRCPGCRKPYEREPVET 326
SCPIC E++DLTD PC CG+ +C++C I+ E + RCP CR PY++E + T
Sbjct: 8 SCPICTEEMDLTDQQLKPCKCGYEICVWCWHHIMEMAQKDETESRCPACRSPYDKERIVT 67
Query: 327 EAS 329
A+
Sbjct: 68 MAA 70
>Glyma10g05590.1
Length = 938
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 6/63 (9%)
Query: 273 SCPICFEDLDLTDTSFLPCLCGFRLCLFCHKRIL------EDDGRCPGCRKPYEREPVET 326
SCPIC E++DLTD PC CG+ +C++C I+ E +GRCP CR PY++E +
Sbjct: 8 SCPICTEEMDLTDQQLKPCKCGYEICVWCWHHIMEMAQKDETEGRCPACRSPYDKERIVA 67
Query: 327 EAS 329
A+
Sbjct: 68 MAA 70
>Glyma15g04950.1
Length = 1029
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 6/58 (10%)
Query: 273 SCPICFEDLDLTDTSFLPCLCGFRLCLFCHKRILE------DDGRCPGCRKPYEREPV 324
+CP+C E++DLTD PC CG+ +C++C ILE +GRCP CR PY++E +
Sbjct: 19 TCPLCAEEMDLTDQQLKPCKCGYEICVWCWHHILEMAEKDDTEGRCPACRSPYDKEKI 76
>Glyma13g40460.1
Length = 1003
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 6/58 (10%)
Query: 273 SCPICFEDLDLTDTSFLPCLCGFRLCLFCHKRILE------DDGRCPGCRKPYEREPV 324
+CP+C E++DLTD PC CG+++C++C ILE +GRCP CR PY++E +
Sbjct: 8 TCPLCAEEMDLTDQQLKPCKCGYQICVWCWHHILEMAEKDDTEGRCPACRSPYDKEKI 65
>Glyma11g15670.1
Length = 941
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 6/58 (10%)
Query: 273 SCPICFEDLDLTDTSFLPCLCGFRLCLFCHKRIL------EDDGRCPGCRKPYEREPV 324
+CP+C E++DLTD PC CG+ +C++C I+ + +GRCP CR PY++E +
Sbjct: 8 TCPLCAEEMDLTDQQLKPCKCGYEICVWCWHHIMDMAEKDDTEGRCPACRSPYDKEKI 65