Miyakogusa Predicted Gene

Lj4g3v0189920.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0189920.1 tr|G8A1V5|G8A1V5_MEDTR MMP37-like protein
OS=Medicago truncatula GN=MTR_126s0014 PE=4 SV=1,80.97,0,seg,NULL;
Mmp37,Mitochondrial matrix Mmp37; SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,Mitochondrial ,CUFF.46634.1
         (331 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g09410.1                                                       496   e-140
Glyma05g26480.1                                                       485   e-137
Glyma18g40400.1                                                       152   5e-37
Glyma08g20630.1                                                        81   2e-15

>Glyma08g09410.1 
          Length = 325

 Score =  496 bits (1277), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 241/330 (73%), Positives = 260/330 (78%), Gaps = 6/330 (1%)

Query: 1   MDHTTTSFRSFLQVLPPVQFACVYGSSLHPTNQDKTSMVDYILGVSDPVQWHSENLKLNK 60
           MD+ T  FRSFLQVLPPV+FACVYGSSLHP+N DKT M DYILGVSDP QWHSENLKLNK
Sbjct: 1   MDNAT--FRSFLQVLPPVEFACVYGSSLHPSNHDKTIMTDYILGVSDPKQWHSENLKLNK 58

Query: 61  HHYASWMVHLGGERLITQVADKIGVGVHFNPFVTWNGKMFKYGVVRMDDLLQDVLYWEKF 120
           HHYASWMVHLGGE LIT VAD+IGVGVHFNPFVTWNGK+FKYGVVRM DLLQDV YWEKF
Sbjct: 59  HHYASWMVHLGGESLITGVADRIGVGVHFNPFVTWNGKLFKYGVVRMHDLLQDVQYWEKF 118

Query: 121 YLCGRLQKPVHVVVDNLDIHGANSVNXXXXXXXXXXXXPSEFTTADLYAKVCSLSYLGDV 180
           YLCGRLQKPVH+VVDNLD+   NSVN            PSEFT ADLYAKVCSLSY GD+
Sbjct: 119 YLCGRLQKPVHIVVDNLDVSSTNSVNLRAAVSAALLLLPSEFTEADLYAKVCSLSYTGDI 178

Query: 181 RMLFAEDKNKVKNIVSGQFDLFHSIYKPFLEEYEAKKLLRLSSTANRPIQVSQDCDXXXX 240
           RMLFAEDK+KVK IV+GQFDLFH +YKPFLEEYEAKKLLRLSSTA   I VSQDCD    
Sbjct: 179 RMLFAEDKSKVKKIVTGQFDLFHLMYKPFLEEYEAKKLLRLSSTAKNQIHVSQDCDLSVA 238

Query: 241 XXXXXXXXXXXXXQMSMKQEQKMKLSETGRIVHDTIISSREEAANCXXXXXXXXXMVSSA 300
                        Q+SMK+E    + ETGR++ DT +S+RE AANC         MVSSA
Sbjct: 239 CSLVSALPSSIRSQISMKEE----IRETGRVIPDTKVSTREAAANCLQRILRQRVMVSSA 294

Query: 301 RQAISGLLAAGGVNATRYLAKKVSKAWKSW 330
           RQAISG LA GGVNATRYLAKKV+KAWKSW
Sbjct: 295 RQAISGFLAVGGVNATRYLAKKVNKAWKSW 324


>Glyma05g26480.1 
          Length = 344

 Score =  485 bits (1249), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 240/350 (68%), Positives = 262/350 (74%), Gaps = 25/350 (7%)

Query: 1   MDHTTTSFRSFLQVLPPVQFACVYGSSLHPTNQDKTSMVDYILGVSDPVQWHSENLKLNK 60
           MD+ T  FRSFLQVLPPV+FACVYGSSLHP+N DKT+M DYILGVSDP QWHSENLKLNK
Sbjct: 1   MDNAT--FRSFLQVLPPVEFACVYGSSLHPSNHDKTTMTDYILGVSDPKQWHSENLKLNK 58

Query: 61  HHYASWMVHLGGERLITQVADKIGVGVHFNPFVTWNGKMFKYGVVRMDDLLQDVLYWEKF 120
           HHYASWMVHLGGE LIT VAD+IGVGVHFNPFVTWNGK+FKYGV++M DLLQDV YWEKF
Sbjct: 59  HHYASWMVHLGGESLITGVADRIGVGVHFNPFVTWNGKLFKYGVIQMHDLLQDVQYWEKF 118

Query: 121 YLCGRLQKPVHVVVDNLDIHGANSVNXXXXXXXXXXXXPSEFTTADLYAKVCSLSYLGDV 180
           YLCGRLQKPVH+VVDNLD++  NSVN            PSEFT  DLYAKVCSLSY GD+
Sbjct: 119 YLCGRLQKPVHIVVDNLDVNSTNSVNLRAAVSAALLLLPSEFTEEDLYAKVCSLSYTGDI 178

Query: 181 RMLFAEDKNKVKNIVSGQFDLFHSIYKPFLEEYEAKKLLRLSSTANRPIQVSQDCDXXXX 240
           RMLFAEDKNKVK IV+GQFDLFHS+YKPFLEEYEAKKLLRLSSTAN  I  +QDCD    
Sbjct: 179 RMLFAEDKNKVKKIVTGQFDLFHSMYKPFLEEYEAKKLLRLSSTANNQIHATQDCDLSVA 238

Query: 241 XXXXXXXXXXXXXQMSMKQEQKMKLSETG-------------------RIVHDTIISSRE 281
                        Q+S   E    L+ETG                   R +HDT +S+RE
Sbjct: 239 CALVSALPPSIRSQISKNGE----LTETGMLMMVVHGGEVVPLNSMMCRFIHDTKVSARE 294

Query: 282 EAANCXXXXXXXXXMVSSARQAISGLLAAGGVNATRYLAKKVSKAWKSWR 331
            AANC         MVSSARQAISGLLA GGVNATRYL+KKVSKAW+SWR
Sbjct: 295 VAANCLQRILRQRVMVSSARQAISGLLAVGGVNATRYLSKKVSKAWRSWR 344


>Glyma18g40400.1 
          Length = 122

 Score =  152 bits (384), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 79/135 (58%), Positives = 90/135 (66%), Gaps = 13/135 (9%)

Query: 99  MFKYGVVRMDDLLQDVLYWEKFYLCGRLQKPVHVVVDNLDIHGANSVNXXXXXXXXXXXX 158
           +F YGVV+M DLLQDV YWEKFYL GRLQK VH+VVD LD++   SVN            
Sbjct: 1   LFNYGVVQMHDLLQDVQYWEKFYLWGRLQKSVHIVVDTLDVNNIKSVNLRVVVSTTLVLL 60

Query: 159 PSEFTTADLYAKVCSLSYLGDVRMLFAEDKNKVKNIVSGQFDLFHSIYKPFLEEYEAKKL 218
           PS+FT  DLYAKVCSLSY   + ML AEDKN+             S+YKPFLEEYEAKKL
Sbjct: 61  PSQFTEEDLYAKVCSLSYTFHIWMLLAEDKNE-------------SMYKPFLEEYEAKKL 107

Query: 219 LRLSSTANRPIQVSQ 233
           LRLSSTAN  I  ++
Sbjct: 108 LRLSSTANIQIHATR 122


>Glyma08g20630.1 
          Length = 60

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/60 (63%), Positives = 42/60 (70%)

Query: 131 HVVVDNLDIHGANSVNXXXXXXXXXXXXPSEFTTADLYAKVCSLSYLGDVRMLFAEDKNK 190
           H+VVDNLD++  NSVN            PSEFT  DLYAKVCSLSY GD+R LFAEDKNK
Sbjct: 1   HIVVDNLDVNSTNSVNSRAAVSAALLLLPSEFTEVDLYAKVCSLSYTGDIRTLFAEDKNK 60