Miyakogusa Predicted Gene

Lj4g3v0189810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0189810.1 tr|E9L577|E9L577_SOYBN CLE31 protein OS=Glycine
max PE=4 SV=1,53.54,1e-17,seg,NULL,CUFF.46621.1
         (122 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g09500.1                                                        85   2e-17
Glyma15g16720.1                                                        70   6e-13
Glyma09g05350.1                                                        65   1e-11

>Glyma08g09500.1 
          Length = 113

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/127 (42%), Positives = 65/127 (51%), Gaps = 19/127 (14%)

Query: 1   MACDTXXXXXPFSTCMAXXXXXXXXXXXTMTVSD-----PLSSTKEDAKKKKTIVATSTR 55
           MA DT      FSTCMA           TM + +     P +S KE AKK+ T V  S R
Sbjct: 1   MAGDTASS---FSTCMAIFFSLLLLSHFTMAMLEHNNFSPSTSNKEGAKKRNTKVVASAR 57

Query: 56  EGSKQSSKNDVVVEEEAAKGIHIPDQMQXXXXXXXXXXXXXXMQLQNRIFNASDHEVPSG 115
           E S+Q+SK D+ + +     IH+P +                 Q QNRIFNAS HEVPSG
Sbjct: 58  EESEQNSKKDMALGDTGKGSIHVPKREHSQHS-----------QSQNRIFNASAHEVPSG 106

Query: 116 PNPISNR 122
           PNPISNR
Sbjct: 107 PNPISNR 113


>Glyma15g16720.1 
          Length = 127

 Score = 70.1 bits (170), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 3/90 (3%)

Query: 36  LSSTKEDA-KKKKTIVATSTRE-GSKQSSKNDVVVEEEAAKGIHIPDQM-QXXXXXXXXX 92
           L+S KE   KK+ T+VA S RE GS Q+ K + +  ++  K  H+PD +           
Sbjct: 38  LASIKESGTKKRNTMVAASAREAGSTQNIKAEEITPKQTIKDDHVPDHLLNGTNKEGSSQ 97

Query: 93  XXXXXMQLQNRIFNASDHEVPSGPNPISNR 122
                ++ QN+IFNAS+HEVPSGPNPISNR
Sbjct: 98  SQRPPLEWQNKIFNASEHEVPSGPNPISNR 127


>Glyma09g05350.1 
          Length = 171

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 7/89 (7%)

Query: 36  LSSTKEDAKKKKTIVATST--REGSKQSSKNDVVVEEEAAKGIHIPDQM-QXXXXXXXXX 92
           L+S KE AKK+ T+VA ST   EGS Q+ K     EE   K  H+ D + +         
Sbjct: 40  LASIKEGAKKRNTMVAASTAREEGSTQNLKT----EEATPKDNHVSDHLLKGTNKEGSSR 95

Query: 93  XXXXXMQLQNRIFNASDHEVPSGPNPISN 121
                ++ QN+IFNAS+HEVPSGPNPISN
Sbjct: 96  SPRPPLERQNKIFNASEHEVPSGPNPISN 124