Miyakogusa Predicted Gene

Lj4g3v0189780.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0189780.1 tr|A9RYS0|A9RYS0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_179489,52.63,4e-17,coiled-coil,NULL,CUFF.46619.1
         (81 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g09520.2                                                       152   9e-38
Glyma05g26530.1                                                       152   9e-38
Glyma08g09520.1                                                       145   1e-35

>Glyma08g09520.2 
          Length = 80

 Score =  152 bits (383), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 71/80 (88%), Positives = 77/80 (96%)

Query: 2  VLSATAIGALLGLGTQMYSNALRKLPYMRHPWEHVLGMGIGVVFVNQLLKWEAQVERDLD 61
          +LSATAIGALLGLGTQMYSNALRKLPYMRHPWEHV+GMG+G VFVNQLLKWEAQVE+DLD
Sbjct: 1  MLSATAIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLLKWEAQVEQDLD 60

Query: 62 VMLERAKAANERRYIDADED 81
           MLE+AKAANERRYID D+D
Sbjct: 61 KMLEKAKAANERRYIDGDDD 80


>Glyma05g26530.1 
          Length = 80

 Score =  152 bits (383), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 71/80 (88%), Positives = 77/80 (96%)

Query: 2  VLSATAIGALLGLGTQMYSNALRKLPYMRHPWEHVLGMGIGVVFVNQLLKWEAQVERDLD 61
          +LSATAIGALLGLGTQMYSNALRKLPYMRHPWEHV+GMG+G VFVNQLLKWEAQVE+DLD
Sbjct: 1  MLSATAIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLLKWEAQVEQDLD 60

Query: 62 VMLERAKAANERRYIDADED 81
           MLE+AKAANERRYID D+D
Sbjct: 61 KMLEKAKAANERRYIDGDDD 80


>Glyma08g09520.1 
          Length = 91

 Score =  145 bits (366), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 68/77 (88%), Positives = 74/77 (96%)

Query: 2  VLSATAIGALLGLGTQMYSNALRKLPYMRHPWEHVLGMGIGVVFVNQLLKWEAQVERDLD 61
          +LSATAIGALLGLGTQMYSNALRKLPYMRHPWEHV+GMG+G VFVNQLLKWEAQVE+DLD
Sbjct: 1  MLSATAIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLLKWEAQVEQDLD 60

Query: 62 VMLERAKAANERRYIDA 78
           MLE+AKAANERRYI +
Sbjct: 61 KMLEKAKAANERRYIGS 77