Miyakogusa Predicted Gene

Lj4g3v0189750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0189750.1 Non Chatacterized Hit- tr|I1K392|I1K392_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.05,3e-19,seg,NULL;
SUBFAMILY NOT NAMED,NULL; DNA2/NAM7 HELICASE FAMILY,NULL,CUFF.46616.1
         (61 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g26540.1                                                        77   5e-15
Glyma06g17340.1                                                        62   1e-10
Glyma20g08150.1                                                        59   1e-09

>Glyma05g26540.1 
          Length = 1146

 Score = 76.6 bits (187), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 39/61 (63%), Positives = 43/61 (70%)

Query: 1   MNYRTLVCAPTNVAIKEVASRVLSIVRSSVDGNSXXXXXXXXXXXXXXNHERLKVGEDIE 60
           MN+RTLVCAPTNVA+KEVASRVLS+VR S D NS              NHERLKVG DIE
Sbjct: 298 MNHRTLVCAPTNVAVKEVASRVLSMVRESFDRNSEALFCALGDMVLFGNHERLKVGADIE 357

Query: 61  E 61
           +
Sbjct: 358 D 358


>Glyma06g17340.1 
          Length = 475

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/61 (50%), Positives = 40/61 (65%)

Query: 1   MNYRTLVCAPTNVAIKEVASRVLSIVRSSVDGNSXXXXXXXXXXXXXXNHERLKVGEDIE 60
           M YR LVCAPTN+AIKEVASRV+++V+ S    S              N+ERLK+GEDI+
Sbjct: 64  MKYRVLVCAPTNIAIKEVASRVVTLVKESHAKESGDLFCSMGDLLLSGNNERLKIGEDIK 123

Query: 61  E 61
           +
Sbjct: 124 D 124


>Glyma20g08150.1 
          Length = 788

 Score = 58.9 bits (141), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 38/61 (62%)

Query: 1   MNYRTLVCAPTNVAIKEVASRVLSIVRSSVDGNSXXXXXXXXXXXXXXNHERLKVGEDIE 60
           M YR LVCAPTNVAIKEVASRV+ I++ +    S               +ERLK+GED+E
Sbjct: 180 MKYRVLVCAPTNVAIKEVASRVVDIMKEAHSKESGDLFCSMGEVLLFGYNERLKIGEDVE 239

Query: 61  E 61
           +
Sbjct: 240 D 240