Miyakogusa Predicted Gene

Lj4g3v0166390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0166390.1 Non Chatacterized Hit- tr|A5B306|A5B306_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,33.33,5e-17,zinc finger,Zinc finger, CCCH-type; zf-CCCH,Zinc
finger, CCCH-type; CCCH zinc finger,NULL; ZF_C3H1,Z,CUFF.46591.1
         (699 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g26620.1                                                       786   0.0  
Glyma08g09630.1                                                       783   0.0  
Glyma17g12510.1                                                       159   1e-38
Glyma05g08490.1                                                        79   2e-14

>Glyma05g26620.1 
          Length = 716

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/624 (67%), Positives = 461/624 (73%), Gaps = 35/624 (5%)

Query: 22  DEALKRNTDCVYFLASPLTCKKGNECEYRHSEYARVNPRDCYYWLNGNCLNPKCSFRHPP 81
           DEALKRNTDCVYFLASPLTCKKGNECEYRHSEYARVNPRDC YWL+GNCLNPKC FRHPP
Sbjct: 25  DEALKRNTDCVYFLASPLTCKKGNECEYRHSEYARVNPRDCRYWLSGNCLNPKCPFRHPP 84

Query: 82  LDGLIXXXXXXXXXXXXXXXXXQIATAAATHAPYNSAKQAVPCIFFQKGLCLKGDRCAFL 141
           LDGL+                 QI TA+ATHAPYNS+KQAVPC FFQKGLCLKGDRCAFL
Sbjct: 85  LDGLLGTQAAVTGGPSVSPS--QIPTASATHAPYNSSKQAVPCFFFQKGLCLKGDRCAFL 142

Query: 142 HGP-NPTTSS--KVATQGPMASQGFENPSLKKPFGGIEKYTQERKSSQGNFSSSVGGFEA 198
           HGP  PT+S+  KVA Q P+ SQG ENP  KKPF   EKYTQERK+SQGN + S G  EA
Sbjct: 143 HGPPTPTSSTGNKVAAQVPVTSQGVENPCFKKPFVSNEKYTQERKTSQGNVAKSSGISEA 202

Query: 199 KPAQKAETA----RFHLEKHVPPPPAGFDNEASRFKITSSPPPMTNGPTVARSNRVHQAR 254
           KPA K ETA     F  EK VPPP  GFDNE SRFK TS  PP+TNGPTVAR NR+HQAR
Sbjct: 203 KPASKIETAPQRNMFEWEKKVPPPAVGFDNEVSRFKTTS--PPVTNGPTVARPNRLHQAR 260

Query: 255 LPDDHSFHSGKDSDEFLRESSPGFDVLVADELRNSDYYHGEDEFGKGRGQDDRNLDSLNE 314
           +PDDH+F SGKDSDEFLRESSPGFDVLVADELRNSDYYHGEDEF K RGQD+RNLDSLNE
Sbjct: 261 VPDDHNFQSGKDSDEFLRESSPGFDVLVADELRNSDYYHGEDEFSKARGQDERNLDSLNE 320

Query: 315 YDIGHSADYSLAADVDRERYRVPHAYDSYDHTQEPYAWEQRRKAPAHVERRTQRRSGSPE 374
           YD+GHS DYSLAAD+DRER+RVP  Y+SYDH QEPYAWEQ RK  AHV+RRT+RRS SPE
Sbjct: 321 YDLGHSGDYSLAADIDRERFRVPQGYESYDHLQEPYAWEQHRKPSAHVDRRTRRRSNSPE 380

Query: 375 NVEVSDLRHRLSKRRKVNGLKSVVTNDYAPGSHGEEQSHRXXXXXXXXXXXXXXX----- 429
           N EVSDLRH LSKRRK NGLKSVV +DYA   HGEEQS R                    
Sbjct: 381 NAEVSDLRHHLSKRRKGNGLKSVVGHDYAHEGHGEEQSRRPFSRKDSLELPLNESFLGNR 440

Query: 430 -XXXXXLPANGADSHLERDSDRGINRGRLSSGRLHAPH-----QGRIQDRIRGSSQDDER 483
                 LPANG   HLER+ DRG  R RLSSGRL A H     +GR+ DRIRG  QDDER
Sbjct: 441 FRGRIKLPANGGADHLERE-DRGRFRNRLSSGRLPATHHLSPGEGRVHDRIRGRLQDDER 499

Query: 484 RN----FRGRELMGNRSDFAAPKSLSELKVGRNTESKEQHSLGKRKSFMDHQ-QSDDDIP 538
           RN      GREL G+RSDFA PKSLSELK GRNTE++EQ SLG+R+S  D + QS+DD  
Sbjct: 500 RNSKDRLMGRELPGDRSDFAGPKSLSELKNGRNTENREQQSLGRRRSLRDDRPQSEDDFL 559

Query: 539 FEGPKPLSEILKEKRGVG--ATSHGGKSSDDKNREIASSSDHTSVENTQNGSLP-----V 591
           FEGPKPLSEILKEKRG G  A S  GKSSD+KN+E+ +  + T   NTQNG L      V
Sbjct: 560 FEGPKPLSEILKEKRGAGADADSGNGKSSDNKNQEVTNGQNPTPAANTQNGVLSETKEDV 619

Query: 592 KSHLLVNEEDSTTQVTDAIGRDSD 615
           K+    NEE S  +VTDA G D+D
Sbjct: 620 KNLPPNNEESSKLEVTDAAGGDND 643


>Glyma08g09630.1 
          Length = 710

 Score =  783 bits (2023), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/623 (67%), Positives = 460/623 (73%), Gaps = 34/623 (5%)

Query: 22  DEALKRNTDCVYFLASPLTCKKGNECEYRHSEYARVNPRDCYYWLNGNCLNPKCSFRHPP 81
           DEALKRNTDCVYFLASPLTCKKGNECEYRHSEYARVNPRDC YWL+GNCLNPKC FRHPP
Sbjct: 22  DEALKRNTDCVYFLASPLTCKKGNECEYRHSEYARVNPRDCRYWLSGNCLNPKCPFRHPP 81

Query: 82  LDGLIXXXXXXXXXXXXXXXXXQIATAAATHAPYNSAKQAVPCIFFQKGLCLKGDRCAFL 141
           LDGL+                 QI TA+A HAPYNS+KQAVPC FFQKGLCLKGDRCAFL
Sbjct: 82  LDGLLGTQATAAGGPSVPPS--QIPTASAAHAPYNSSKQAVPCYFFQKGLCLKGDRCAFL 139

Query: 142 HGP---NPTTSSKVATQGPMASQGFENPSLKKPFGGIEKYTQERKSSQGNFSSSVGGFEA 198
           HGP    P+T +KVA Q P+  QG ENPS KKPF   EKYTQERK+SQGNF+ S G  EA
Sbjct: 140 HGPPAPTPSTGNKVAAQVPVTIQGAENPSFKKPFVSNEKYTQERKTSQGNFAKSGGAPEA 199

Query: 199 KPAQKAETA----RFHLEKHVPPPPAGFDNEASRFKITSSPPPMTNGPTVARSNRVHQAR 254
           KP+ K ETA     F LEK VPPP A F+NEASRFK  S  PP+TNGP VARSNR+HQAR
Sbjct: 200 KPSPKIETAPQRNMFELEKKVPPPSAEFNNEASRFKTIS--PPVTNGPIVARSNRLHQAR 257

Query: 255 LPDDHSFHSGKDSDEFLRESSPGFDVLVADELRNSDYYHGEDEFGKGRGQDDRNLDSLNE 314
           +PDDH+F SGKDSDEFLRESSPGFDVLVADELRNSDYYHGEDEFGK RGQD+RNLDSLNE
Sbjct: 258 VPDDHNFQSGKDSDEFLRESSPGFDVLVADELRNSDYYHGEDEFGKARGQDERNLDSLNE 317

Query: 315 YDIGHSADYSLAADVDRERYRVPHAYDSYDHTQEPYAWEQRRKAPAHVERRTQRRSGSPE 374
           YD+GHS DYSLAAD+DRER+R P  Y+SYDH QEPYAWEQ RK  +H+ RRT+RRS SPE
Sbjct: 318 YDLGHSGDYSLAADIDRERFRGPQGYESYDHMQEPYAWEQHRKPSSHLGRRTRRRSDSPE 377

Query: 375 NVEVSDLRHRLSKRRKVNGLKSVVTNDYAPGSHGEEQSHRXXXXXXXXXXXXXXXXXXX- 433
           N EVSDLRH LSKRRK NGLKSV+++D+A G HGEEQS R                    
Sbjct: 378 NAEVSDLRHHLSKRRKGNGLKSVISHDHAHGGHGEEQSRRSFSRKDSLELPLNESSLGNR 437

Query: 434 -----XLPANGADSHLERDSDRGINRGRLSSGRLHA-----PHQGRIQDRIRGSSQDDER 483
                 LP NG   H ER+ D G  R RL SGRL A     P +GR+ DRIRG  QDDER
Sbjct: 438 FRGRIKLPENGDGDHPERE-DGGRFRNRLPSGRLPATHHLSPREGRVHDRIRGRLQDDER 496

Query: 484 RN----FRGRELMGNRSDFAAPKSLSELKVGRNTESKEQHSLGKRKSFM-DHQQSDDDIP 538
           RN      GREL G+RSDFAAPKSLSELK GRNTE++EQ SLG+R+S   DH QSDDD  
Sbjct: 497 RNSKDRLMGRELPGDRSDFAAPKSLSELKNGRNTENREQQSLGRRRSLRDDHPQSDDDFL 556

Query: 539 FEGPKPLSEILKEKRGVGATSH--GGKSSDDKNREIASSSDHTSVENTQNGSLPVK---- 592
           FEGPKPLSEILKEKRG GA S    GKSSD+KN E+   SD  SV NTQNG L       
Sbjct: 557 FEGPKPLSEILKEKRGAGADSDSGNGKSSDNKNVEVTHGSDPMSVANTQNGVLSETKEDD 616

Query: 593 SHLLVNEEDSTTQVTDAIGRDSD 615
            +LL+N E+S  +VTDA G D+D
Sbjct: 617 KNLLLNNEESKLEVTDAAGGDND 639


>Glyma17g12510.1 
          Length = 392

 Score =  159 bits (401), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/272 (36%), Positives = 130/272 (47%), Gaps = 72/272 (26%)

Query: 22  DEALKRNTDCVYFLASPLTCKKGNECEYRHSEYARVNPRDCYYWLNGNCLNPKCSFRHPP 81
           +++LKR TDCVYFLASPLTCKKG ECEYRH+E AR+NPRDC+YWL+G CLNP C+FRHP 
Sbjct: 3   EDSLKRYTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGQCLNPTCAFRHPT 62

Query: 82  LDGLIXXXXXXXXXXXXXXXXXQIATAAATHAPYNSAKQAVPCIFFQKGLCLKGDRCAFL 141
           L                                       VPC FF  G C KGDRC+FL
Sbjct: 63  L---------------------------------------VPCYFFFNGFCNKGDRCSFL 83

Query: 142 HGPNPTTSSKVATQGPMASQGFENPSLKKPFGGIEKYTQERKSSQGNFSSSVGGFEAKPA 201
           HGP+ +               F    +K   G  +    E K+  GN +++         
Sbjct: 84  HGPDDSI--------------FNIKPVKNENGSTDALNLENKAPSGNRTAAPKNLSDLKH 129

Query: 202 QKAETARFHLEKHVPPPPAGFDNEASRFKITSSPPPMTNGPTVARSNRVHQARLPDDHSF 261
           Q  E  +  L K+V       +  AS +K  +          V+RS+    + +PDD   
Sbjct: 130 QPKEDHQLELPKNVKQQGDYLELSASEYKEAA----------VSRSD----SSIPDDGFV 175

Query: 262 HSGKDSDEFLRES--SPGFDVLVADELRNSDY 291
           H   + +E+   S  SPGFDVLV DE+ N  Y
Sbjct: 176 H---NPEEWWESSPHSPGFDVLVHDEVENLGY 204


>Glyma05g08490.1 
          Length = 469

 Score = 79.0 bits (193), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 29/41 (70%), Positives = 35/41 (85%)

Query: 43 KGNECEYRHSEYARVNPRDCYYWLNGNCLNPKCSFRHPPLD 83
          +G ECEYRH+E AR+NPRDC+YWL+G CLNP C+FRHP  D
Sbjct: 1  QGAECEYRHNEIARLNPRDCWYWLSGQCLNPTCAFRHPMYD 41