Miyakogusa Predicted Gene

Lj4g3v0165050.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0165050.1 tr|D7KBM7|D7KBM7_ARALL Predicted protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_679191
PE,35.67,0.0000000000002,seg,NULL,
NODE_5542_length_945_cov_50.869843.path1.1
         (229 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g09710.1                                                       226   2e-59
Glyma05g26710.1                                                       175   4e-44
Glyma11g33300.1                                                        54   9e-08
Glyma11g33300.2                                                        54   1e-07
Glyma08g46560.2                                                        50   1e-06
Glyma08g46560.1                                                        50   1e-06

>Glyma08g09710.1 
          Length = 283

 Score =  226 bits (576), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/241 (55%), Positives = 152/241 (63%), Gaps = 22/241 (9%)

Query: 1   MNELHSLA-SYTSSLYGSSLAWDYHNLGVLNADRMSLMPEAMEGSVSAAVSFSSPHQETD 59
           MN LHSLA + T++L GSSL WDYHNLGVLNAD+MSLMP AMEGS +   S SSP Q +D
Sbjct: 7   MNHLHSLAYTTTTNLCGSSLGWDYHNLGVLNADKMSLMP-AMEGSTTPP-SLSSP-QHSD 63

Query: 60  FSTGYLEDALVEFGERAKRRRLLLPCIXXXXXXXXXXXXXXLEKGLWDFNPTWHQPVE-- 117
           FSTGYLEDAL+E  ER+KRRR +LPC               LE+  W+FNP W+QPVE  
Sbjct: 64  FSTGYLEDALIESCERSKRRR-VLPC---AADEHSKSFIDDLEQSFWNFNPLWNQPVENF 119

Query: 118 NLYCMDQIERICGFSDEHISTFRSRISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 177
           N YCM+QIER CGFSDEHIST RS                                    
Sbjct: 120 NFYCMNQIERFCGFSDEHISTSRSE--EANILLADTKTPEETISASESLNSSSSSYKQPV 177

Query: 178 XXKTTEI---------QQNKRVITRSVVYPFALVKPGGREGDVTLNDINERILMPPTRPV 228
             KTT+           +NK+V+TR VVYPFA+VKPGGREGDVTLNDINERILMPPTRPV
Sbjct: 178 TCKTTDPTVAPTENDDTRNKKVVTR-VVYPFAMVKPGGREGDVTLNDINERILMPPTRPV 236

Query: 229 R 229
           R
Sbjct: 237 R 237


>Glyma05g26710.1 
          Length = 241

 Score =  175 bits (443), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 108/207 (52%), Positives = 122/207 (58%), Gaps = 22/207 (10%)

Query: 34  MSLMPEAMEGSVSAAVSFSSPHQETDFSTGYLEDALVEFGERAKRRRLLLPCIXXXXXXX 93
           MSLMP AMEGS +   S SSP Q +DFSTGYLEDAL+E  ER+KRRR+L PC        
Sbjct: 1   MSLMP-AMEGSTTP--SLSSP-QHSDFSTGYLEDALIESCERSKRRRVL-PC---ATDEH 52

Query: 94  XXXXXXXLEKGLWDFNPTWHQPVENL--YCMDQIERICGFSDEHISTFRSRISXXXXXXX 151
                  LE+  W+FNP W+QPVEN   YCM+QIER CG SDEHIST RS          
Sbjct: 53  SKSFIDDLEQSFWNFNPLWNQPVENFNFYCMNQIERFCGISDEHISTSRSE--EANILLA 110

Query: 152 XXXXXXXXXXXXXXXXXXXXXXXXXXXXKTTEI---------QQNKRVITRSVVYPFALV 202
                                       KTT+           +NK+V+TR VVYPFA+V
Sbjct: 111 DTKTPEETISASESLNSSSSSYKQPATCKTTDPTVAPTENDDMRNKKVVTR-VVYPFAMV 169

Query: 203 KPGGREGDVTLNDINERILMPPTRPVR 229
           KPGGREGDVTLNDINERILMPPTRPVR
Sbjct: 170 KPGGREGDVTLNDINERILMPPTRPVR 196


>Glyma11g33300.1 
          Length = 201

 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 32/44 (72%)

Query: 185 QQNKRVITRSVVYPFALVKPGGREGDVTLNDINERILMPPTRPV 228
           + ++R   + + YPF LVKPGG EG+ TL DIN ++LM P++P+
Sbjct: 112 ESDERGHWKRIAYPFELVKPGGVEGETTLKDINHQMLMSPSKPI 155


>Glyma11g33300.2 
          Length = 200

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 32/44 (72%)

Query: 185 QQNKRVITRSVVYPFALVKPGGREGDVTLNDINERILMPPTRPV 228
           + ++R   + + YPF LVKPGG EG+ TL DIN ++LM P++P+
Sbjct: 111 ESDERGHWKRIAYPFELVKPGGVEGETTLKDINHQMLMSPSKPI 154


>Glyma08g46560.2 
          Length = 299

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 25/34 (73%)

Query: 191 ITRSVVYPFALVKPGGREGDVTLNDINERILMPP 224
           +  SV YPFA +KP G  GDVTL +IN+RIL PP
Sbjct: 218 LAASVAYPFAFIKPCGAHGDVTLKEINQRILSPP 251


>Glyma08g46560.1 
          Length = 302

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 25/34 (73%)

Query: 191 ITRSVVYPFALVKPGGREGDVTLNDINERILMPP 224
           +  SV YPFA +KP G  GDVTL +IN+RIL PP
Sbjct: 221 LAASVAYPFAFIKPCGAHGDVTLKEINQRILSPP 254