Miyakogusa Predicted Gene

Lj4g3v0151510.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0151510.1 tr|D7KMI1|D7KMI1_ARALL Ankyrin repeat family
protein OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRA,41.8,1e-16,seg,NULL; GPCR_chapero_1,Ankyrin repeat
domain-containing protein 13,CUFF.46529.1
         (132 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g01630.1                                                        88   3e-18
Glyma07g39110.1                                                        86   1e-17
Glyma09g00640.1                                                        65   2e-11
Glyma15g11520.1                                                        62   1e-10

>Glyma17g01630.1 
          Length = 562

 Score = 87.8 bits (216), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 53/92 (57%), Positives = 57/92 (61%), Gaps = 13/92 (14%)

Query: 24  FTKFVELQPVEQFYTPFSSPRHLSSE--TGRVDEEHKPERHRXXXXXXXVAYKWLRRNNS 81
           FTKFVELQP+EQFYTPFSSPRHL S    GR DEE     +R           WLRRNNS
Sbjct: 463 FTKFVELQPLEQFYTPFSSPRHLLSAAGAGRGDEEQSKAENRCSSSSSST---WLRRNNS 519

Query: 82  MSRAGNKQQQPQCSSMTLDCDTFAIPAGYTWT 113
           +S   NKQ   +C  M  D D F IPAGYTWT
Sbjct: 520 VS---NKQ---RC--MAFDSDPFKIPAGYTWT 543


>Glyma07g39110.1 
          Length = 579

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/91 (57%), Positives = 58/91 (63%), Gaps = 12/91 (13%)

Query: 24  FTKFVELQPVEQFYTPFSSPRHLSSETGR-VDEEHKPERHRXXXXXXXVAYKWLRRNNSM 82
           FTKFVELQP+EQFYTPFSSPRHL     R  DE+     +R        +  WLRRNNS+
Sbjct: 481 FTKFVELQPLEQFYTPFSSPRHLLLSASRGGDEQQSKAENRCSSSS---SSTWLRRNNSV 537

Query: 83  SRAGNKQQQPQCSSMTLDCDTFAIPAGYTWT 113
           S   NKQ   +C  M LD D FAIPAGYTWT
Sbjct: 538 S---NKQ---RC--MALDSDPFAIPAGYTWT 560


>Glyma09g00640.1 
          Length = 579

 Score = 65.1 bits (157), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/91 (43%), Positives = 47/91 (51%), Gaps = 14/91 (15%)

Query: 24  FTKFVELQPVEQFYTPFSSPRHLSSETGRVDEEHKPERHRXXXXXXXVAYKWLRRNNSMS 83
           FTKFVELQPVE+FYTP SSP HL +      ++  P            ++ W        
Sbjct: 482 FTKFVELQPVEKFYTPLSSPTHLLNA-----DDDDPSGRSTCLRRTSTSHSW-------- 528

Query: 84  RAGNKQQQPQCSSM-TLDCDTFAIPAGYTWT 113
             G+K QQ   SS   LD D FAIP GYTWT
Sbjct: 529 GGGSKHQQRSSSSSGALDSDPFAIPVGYTWT 559


>Glyma15g11520.1 
          Length = 589

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/90 (47%), Positives = 53/90 (58%), Gaps = 5/90 (5%)

Query: 24  FTKFVELQPVEQFYTPFSSPRHLSSETGRVDEEHKPERHRXXXXXXXVAYKWLRRNNSMS 83
           FTKFVELQPVE+FYTP SSP HL +     +++  P++ R           WLRR+ S S
Sbjct: 485 FTKFVELQPVEKFYTPLSSPTHLLN----AEDDDDPQKLRRQGSSSSGRSTWLRRSTSSS 540

Query: 84  RAGNKQQQPQCSSMTLDCDTFAIPAGYTWT 113
            +   QQ+   S   LD D FAIP GYTWT
Sbjct: 541 SSSQHQQRCSSSG-ALDSDPFAIPVGYTWT 569