Miyakogusa Predicted Gene
- Lj4g3v0134610.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0134610.1 Non Chatacterized Hit- tr|I1KNG6|I1KNG6_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,93.55,0,ValRS/IleRS/LeuRS editing
domain,Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing
domain; N,CUFF.46506.1
(411 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma07g39300.1 760 0.0
Glyma07g39300.2 759 0.0
Glyma17g01430.1 401 e-112
Glyma10g38450.2 52 9e-07
Glyma10g38450.1 52 9e-07
>Glyma07g39300.1
Length = 972
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/403 (93%), Positives = 389/403 (96%), Gaps = 1/403 (0%)
Query: 1 MRQWMLKITAYADRLFEDLDDLDWPESVKEMQRNWIGRSEGAEMEFCILDNDGKERDINI 60
MRQWMLKITAYADRL EDLDDLDWPESVKEMQRNWIGRSEGAEMEFCILD+DGKERDI I
Sbjct: 271 MRQWMLKITAYADRLLEDLDDLDWPESVKEMQRNWIGRSEGAEMEFCILDSDGKERDITI 330
Query: 61 IVYTTRPDTIFGATYLVVAPEHPLLLSLVSVAQSKQVEDYVDLASRKSDLERTELQKEKT 120
IVYTTRPDTIFGATYLVVAPEHPLL SLVS+AQSK VEDYVDLASRKSDLERTELQKEKT
Sbjct: 331 IVYTTRPDTIFGATYLVVAPEHPLLSSLVSIAQSKHVEDYVDLASRKSDLERTELQKEKT 390
Query: 121 GVFTGCYAKNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDSRDYEFALKYDVPVRWVVL 180
GVFTGCYAKNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDSRDYEFALKYDVP+ WVV+
Sbjct: 391 GVFTGCYAKNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDSRDYEFALKYDVPICWVVM 450
Query: 181 PDGKSVNESGKAFPGEGIIANSSNKVVGLDINGLSSKEAALKVIKWAEKSGNGKRKVNYK 240
PD KS+ ESGKAF GEG I NSSN +VGLDINGLSS EAALKVI+WAEKSGNGKRKVNYK
Sbjct: 451 PDDKSI-ESGKAFSGEGTIVNSSNTLVGLDINGLSSNEAALKVIEWAEKSGNGKRKVNYK 509
Query: 241 LRDWLFARQRYWGEPIPVIFLDDSGETIPLSETELPIILPELDDFSPSGTGEPPLSKAVS 300
LRDWLFARQRYWGEPIPVIFLDDS ET+PL ETELP+ILPELDDFSP+GTGEPPLSKAVS
Sbjct: 510 LRDWLFARQRYWGEPIPVIFLDDSDETVPLCETELPLILPELDDFSPTGTGEPPLSKAVS 569
Query: 301 WVKTTDSLSGRPATRETNTMPQWAGSCWYYLRFMDPNNSKELVDKTKERYWGPVDVYVGG 360
WVKTTDSLSGRPATRETNTMPQWAGSCWYYLRFMDP+NSKELVDKTKERYWGPVDVYVGG
Sbjct: 570 WVKTTDSLSGRPATRETNTMPQWAGSCWYYLRFMDPHNSKELVDKTKERYWGPVDVYVGG 629
Query: 361 AEHAVLHLLYARFWHKVLFDIGVVSTKEPFQCVINQGIILGEV 403
AEHAVLHLLYARFWHKVLFDIGVVSTKEPFQCVINQGIILGEV
Sbjct: 630 AEHAVLHLLYARFWHKVLFDIGVVSTKEPFQCVINQGIILGEV 672
>Glyma07g39300.2
Length = 829
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/403 (93%), Positives = 389/403 (96%), Gaps = 1/403 (0%)
Query: 1 MRQWMLKITAYADRLFEDLDDLDWPESVKEMQRNWIGRSEGAEMEFCILDNDGKERDINI 60
MRQWMLKITAYADRL EDLDDLDWPESVKEMQRNWIGRSEGAEMEFCILD+DGKERDI I
Sbjct: 271 MRQWMLKITAYADRLLEDLDDLDWPESVKEMQRNWIGRSEGAEMEFCILDSDGKERDITI 330
Query: 61 IVYTTRPDTIFGATYLVVAPEHPLLLSLVSVAQSKQVEDYVDLASRKSDLERTELQKEKT 120
IVYTTRPDTIFGATYLVVAPEHPLL SLVS+AQSK VEDYVDLASRKSDLERTELQKEKT
Sbjct: 331 IVYTTRPDTIFGATYLVVAPEHPLLSSLVSIAQSKHVEDYVDLASRKSDLERTELQKEKT 390
Query: 121 GVFTGCYAKNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDSRDYEFALKYDVPVRWVVL 180
GVFTGCYAKNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDSRDYEFALKYDVP+ WVV+
Sbjct: 391 GVFTGCYAKNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDSRDYEFALKYDVPICWVVM 450
Query: 181 PDGKSVNESGKAFPGEGIIANSSNKVVGLDINGLSSKEAALKVIKWAEKSGNGKRKVNYK 240
PD KS+ ESGKAF GEG I NSSN +VGLDINGLSS EAALKVI+WAEKSGNGKRKVNYK
Sbjct: 451 PDDKSI-ESGKAFSGEGTIVNSSNTLVGLDINGLSSNEAALKVIEWAEKSGNGKRKVNYK 509
Query: 241 LRDWLFARQRYWGEPIPVIFLDDSGETIPLSETELPIILPELDDFSPSGTGEPPLSKAVS 300
LRDWLFARQRYWGEPIPVIFLDDS ET+PL ETELP+ILPELDDFSP+GTGEPPLSKAVS
Sbjct: 510 LRDWLFARQRYWGEPIPVIFLDDSDETVPLCETELPLILPELDDFSPTGTGEPPLSKAVS 569
Query: 301 WVKTTDSLSGRPATRETNTMPQWAGSCWYYLRFMDPNNSKELVDKTKERYWGPVDVYVGG 360
WVKTTDSLSGRPATRETNTMPQWAGSCWYYLRFMDP+NSKELVDKTKERYWGPVDVYVGG
Sbjct: 570 WVKTTDSLSGRPATRETNTMPQWAGSCWYYLRFMDPHNSKELVDKTKERYWGPVDVYVGG 629
Query: 361 AEHAVLHLLYARFWHKVLFDIGVVSTKEPFQCVINQGIILGEV 403
AEHAVLHLLYARFWHKVLFDIGVVSTKEPFQCVINQGIILGEV
Sbjct: 630 AEHAVLHLLYARFWHKVLFDIGVVSTKEPFQCVINQGIILGEV 672
>Glyma17g01430.1
Length = 801
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 191/216 (88%), Positives = 202/216 (93%), Gaps = 2/216 (0%)
Query: 188 ESGKAFPGEGIIANSSNKVVGLDINGLSSKEAALKVIKWAEKSGNGKRKVNYKLRDWLFA 247
+SGKAF GII NSSN + GLDIN LSSKEAALKVI+WA KSGNGKRKVNYKLRDWLFA
Sbjct: 321 KSGKAF--SGIIVNSSNTLAGLDINSLSSKEAALKVIEWAGKSGNGKRKVNYKLRDWLFA 378
Query: 248 RQRYWGEPIPVIFLDDSGETIPLSETELPIILPELDDFSPSGTGEPPLSKAVSWVKTTDS 307
RQRYWGEPIPVIF+DD+GET+PL +TELP+ LPEL+DF PSGTGEPPLSKAVSWVK TDS
Sbjct: 379 RQRYWGEPIPVIFMDDNGETVPLCDTELPLTLPELNDFCPSGTGEPPLSKAVSWVKATDS 438
Query: 308 LSGRPATRETNTMPQWAGSCWYYLRFMDPNNSKELVDKTKERYWGPVDVYVGGAEHAVLH 367
LSGRPATRETNTMPQWAGSCWYYLRFMDP+NSKELVDKTKERYW PVDVYVGGAEHAVLH
Sbjct: 439 LSGRPATRETNTMPQWAGSCWYYLRFMDPHNSKELVDKTKERYWSPVDVYVGGAEHAVLH 498
Query: 368 LLYARFWHKVLFDIGVVSTKEPFQCVINQGIILGEV 403
LLYARFWHKVL+DIGVVSTKEPFQ VINQGIILGEV
Sbjct: 499 LLYARFWHKVLYDIGVVSTKEPFQYVINQGIILGEV 534
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/96 (86%), Positives = 87/96 (90%)
Query: 1 MRQWMLKITAYADRLFEDLDDLDWPESVKEMQRNWIGRSEGAEMEFCILDNDGKERDINI 60
+RQWMLKI AYAD L EDLDDLDWPESVKEMQRNWIGRSEGAEMEFCILD+D KERD I
Sbjct: 212 VRQWMLKIIAYADCLLEDLDDLDWPESVKEMQRNWIGRSEGAEMEFCILDSDVKERDKKI 271
Query: 61 IVYTTRPDTIFGATYLVVAPEHPLLLSLVSVAQSKQ 96
IVYT RPDTIFGATYLV+APEHPLL SLVS+AQSK
Sbjct: 272 IVYTARPDTIFGATYLVMAPEHPLLSSLVSIAQSKH 307
>Glyma10g38450.2
Length = 1050
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 91/247 (36%), Gaps = 81/247 (32%)
Query: 60 IIVYTTRPDTIFGATYLVVAPEHPLLLSLVSVAQSKQVEDYVDLASRKSDLERTELQKEK 119
I+V TTR +T+ G T + V P ++
Sbjct: 324 IVVATTRIETMLGDTAIAVHP-----------------------------------NDDR 348
Query: 120 TGVFTGCYAKNPANGEAIPIWVADYVL--GSYGTGAIMAVPAHDSRDYEFALKYDVPVRW 177
F G YA +P NG +PI + D +L +GTGA+ PAHD D+E ++++
Sbjct: 349 YSHFHGKYAIHPFNGRKLPI-ICDAILVDPKFGTGAVKITPAHDPNDFEVGKRHNLEFIN 407
Query: 178 VVLPDGKSVNESGKAFPG-------EGI---------------------IANSSNKVVGL 209
V DGK + G F G E + + + SN VV
Sbjct: 408 VFTDDGKINSNGGSDFLGMLRFKAREAVAEALQKKDLYRGSENNEMRLGVCSRSNDVVEP 467
Query: 210 DING---LSSKEAALKVIKWAEKSGNGKRKVNYK------------LRDWLFARQRYWGE 254
I ++ + A + + A N + ++ K +RDW +RQ +WG
Sbjct: 468 MIKPQWYVNCNDLAKQALHAAVDEENKRIEIIPKQYLADWKRWLENIRDWCISRQLWWGH 527
Query: 255 PIPVIFL 261
IP ++
Sbjct: 528 QIPAWYV 534
>Glyma10g38450.1
Length = 1050
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 91/247 (36%), Gaps = 81/247 (32%)
Query: 60 IIVYTTRPDTIFGATYLVVAPEHPLLLSLVSVAQSKQVEDYVDLASRKSDLERTELQKEK 119
I+V TTR +T+ G T + V P ++
Sbjct: 324 IVVATTRIETMLGDTAIAVHP-----------------------------------NDDR 348
Query: 120 TGVFTGCYAKNPANGEAIPIWVADYVL--GSYGTGAIMAVPAHDSRDYEFALKYDVPVRW 177
F G YA +P NG +PI + D +L +GTGA+ PAHD D+E ++++
Sbjct: 349 YSHFHGKYAIHPFNGRKLPI-ICDAILVDPKFGTGAVKITPAHDPNDFEVGKRHNLEFIN 407
Query: 178 VVLPDGKSVNESGKAFPG-------EGI---------------------IANSSNKVVGL 209
V DGK + G F G E + + + SN VV
Sbjct: 408 VFTDDGKINSNGGSDFLGMLRFKAREAVAEALQKKDLYRGSENNEMRLGVCSRSNDVVEP 467
Query: 210 DING---LSSKEAALKVIKWAEKSGNGKRKVNYK------------LRDWLFARQRYWGE 254
I ++ + A + + A N + ++ K +RDW +RQ +WG
Sbjct: 468 MIKPQWYVNCNDLAKQALHAAVDEENKRIEIIPKQYLADWKRWLENIRDWCISRQLWWGH 527
Query: 255 PIPVIFL 261
IP ++
Sbjct: 528 QIPAWYV 534