Miyakogusa Predicted Gene

Lj4g3v0134610.1
Show Alignment: 
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0134610.1 Non Chatacterized Hit- tr|I1KNG6|I1KNG6_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,93.55,0,ValRS/IleRS/LeuRS editing
domain,Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing
domain; N,CUFF.46506.1
         (411 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g39300.1                                                       760   0.0  
Glyma07g39300.2                                                       759   0.0  
Glyma17g01430.1                                                       401   e-112
Glyma10g38450.2                                                        52   9e-07
Glyma10g38450.1                                                        52   9e-07

>Glyma07g39300.1 
          Length = 972

 Score =  760 bits (1963), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/403 (93%), Positives = 389/403 (96%), Gaps = 1/403 (0%)

Query: 1   MRQWMLKITAYADRLFEDLDDLDWPESVKEMQRNWIGRSEGAEMEFCILDNDGKERDINI 60
           MRQWMLKITAYADRL EDLDDLDWPESVKEMQRNWIGRSEGAEMEFCILD+DGKERDI I
Sbjct: 271 MRQWMLKITAYADRLLEDLDDLDWPESVKEMQRNWIGRSEGAEMEFCILDSDGKERDITI 330

Query: 61  IVYTTRPDTIFGATYLVVAPEHPLLLSLVSVAQSKQVEDYVDLASRKSDLERTELQKEKT 120
           IVYTTRPDTIFGATYLVVAPEHPLL SLVS+AQSK VEDYVDLASRKSDLERTELQKEKT
Sbjct: 331 IVYTTRPDTIFGATYLVVAPEHPLLSSLVSIAQSKHVEDYVDLASRKSDLERTELQKEKT 390

Query: 121 GVFTGCYAKNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDSRDYEFALKYDVPVRWVVL 180
           GVFTGCYAKNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDSRDYEFALKYDVP+ WVV+
Sbjct: 391 GVFTGCYAKNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDSRDYEFALKYDVPICWVVM 450

Query: 181 PDGKSVNESGKAFPGEGIIANSSNKVVGLDINGLSSKEAALKVIKWAEKSGNGKRKVNYK 240
           PD KS+ ESGKAF GEG I NSSN +VGLDINGLSS EAALKVI+WAEKSGNGKRKVNYK
Sbjct: 451 PDDKSI-ESGKAFSGEGTIVNSSNTLVGLDINGLSSNEAALKVIEWAEKSGNGKRKVNYK 509

Query: 241 LRDWLFARQRYWGEPIPVIFLDDSGETIPLSETELPIILPELDDFSPSGTGEPPLSKAVS 300
           LRDWLFARQRYWGEPIPVIFLDDS ET+PL ETELP+ILPELDDFSP+GTGEPPLSKAVS
Sbjct: 510 LRDWLFARQRYWGEPIPVIFLDDSDETVPLCETELPLILPELDDFSPTGTGEPPLSKAVS 569

Query: 301 WVKTTDSLSGRPATRETNTMPQWAGSCWYYLRFMDPNNSKELVDKTKERYWGPVDVYVGG 360
           WVKTTDSLSGRPATRETNTMPQWAGSCWYYLRFMDP+NSKELVDKTKERYWGPVDVYVGG
Sbjct: 570 WVKTTDSLSGRPATRETNTMPQWAGSCWYYLRFMDPHNSKELVDKTKERYWGPVDVYVGG 629

Query: 361 AEHAVLHLLYARFWHKVLFDIGVVSTKEPFQCVINQGIILGEV 403
           AEHAVLHLLYARFWHKVLFDIGVVSTKEPFQCVINQGIILGEV
Sbjct: 630 AEHAVLHLLYARFWHKVLFDIGVVSTKEPFQCVINQGIILGEV 672


>Glyma07g39300.2 
          Length = 829

 Score =  759 bits (1959), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/403 (93%), Positives = 389/403 (96%), Gaps = 1/403 (0%)

Query: 1   MRQWMLKITAYADRLFEDLDDLDWPESVKEMQRNWIGRSEGAEMEFCILDNDGKERDINI 60
           MRQWMLKITAYADRL EDLDDLDWPESVKEMQRNWIGRSEGAEMEFCILD+DGKERDI I
Sbjct: 271 MRQWMLKITAYADRLLEDLDDLDWPESVKEMQRNWIGRSEGAEMEFCILDSDGKERDITI 330

Query: 61  IVYTTRPDTIFGATYLVVAPEHPLLLSLVSVAQSKQVEDYVDLASRKSDLERTELQKEKT 120
           IVYTTRPDTIFGATYLVVAPEHPLL SLVS+AQSK VEDYVDLASRKSDLERTELQKEKT
Sbjct: 331 IVYTTRPDTIFGATYLVVAPEHPLLSSLVSIAQSKHVEDYVDLASRKSDLERTELQKEKT 390

Query: 121 GVFTGCYAKNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDSRDYEFALKYDVPVRWVVL 180
           GVFTGCYAKNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDSRDYEFALKYDVP+ WVV+
Sbjct: 391 GVFTGCYAKNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDSRDYEFALKYDVPICWVVM 450

Query: 181 PDGKSVNESGKAFPGEGIIANSSNKVVGLDINGLSSKEAALKVIKWAEKSGNGKRKVNYK 240
           PD KS+ ESGKAF GEG I NSSN +VGLDINGLSS EAALKVI+WAEKSGNGKRKVNYK
Sbjct: 451 PDDKSI-ESGKAFSGEGTIVNSSNTLVGLDINGLSSNEAALKVIEWAEKSGNGKRKVNYK 509

Query: 241 LRDWLFARQRYWGEPIPVIFLDDSGETIPLSETELPIILPELDDFSPSGTGEPPLSKAVS 300
           LRDWLFARQRYWGEPIPVIFLDDS ET+PL ETELP+ILPELDDFSP+GTGEPPLSKAVS
Sbjct: 510 LRDWLFARQRYWGEPIPVIFLDDSDETVPLCETELPLILPELDDFSPTGTGEPPLSKAVS 569

Query: 301 WVKTTDSLSGRPATRETNTMPQWAGSCWYYLRFMDPNNSKELVDKTKERYWGPVDVYVGG 360
           WVKTTDSLSGRPATRETNTMPQWAGSCWYYLRFMDP+NSKELVDKTKERYWGPVDVYVGG
Sbjct: 570 WVKTTDSLSGRPATRETNTMPQWAGSCWYYLRFMDPHNSKELVDKTKERYWGPVDVYVGG 629

Query: 361 AEHAVLHLLYARFWHKVLFDIGVVSTKEPFQCVINQGIILGEV 403
           AEHAVLHLLYARFWHKVLFDIGVVSTKEPFQCVINQGIILGEV
Sbjct: 630 AEHAVLHLLYARFWHKVLFDIGVVSTKEPFQCVINQGIILGEV 672


>Glyma17g01430.1 
          Length = 801

 Score =  401 bits (1031), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 191/216 (88%), Positives = 202/216 (93%), Gaps = 2/216 (0%)

Query: 188 ESGKAFPGEGIIANSSNKVVGLDINGLSSKEAALKVIKWAEKSGNGKRKVNYKLRDWLFA 247
           +SGKAF   GII NSSN + GLDIN LSSKEAALKVI+WA KSGNGKRKVNYKLRDWLFA
Sbjct: 321 KSGKAF--SGIIVNSSNTLAGLDINSLSSKEAALKVIEWAGKSGNGKRKVNYKLRDWLFA 378

Query: 248 RQRYWGEPIPVIFLDDSGETIPLSETELPIILPELDDFSPSGTGEPPLSKAVSWVKTTDS 307
           RQRYWGEPIPVIF+DD+GET+PL +TELP+ LPEL+DF PSGTGEPPLSKAVSWVK TDS
Sbjct: 379 RQRYWGEPIPVIFMDDNGETVPLCDTELPLTLPELNDFCPSGTGEPPLSKAVSWVKATDS 438

Query: 308 LSGRPATRETNTMPQWAGSCWYYLRFMDPNNSKELVDKTKERYWGPVDVYVGGAEHAVLH 367
           LSGRPATRETNTMPQWAGSCWYYLRFMDP+NSKELVDKTKERYW PVDVYVGGAEHAVLH
Sbjct: 439 LSGRPATRETNTMPQWAGSCWYYLRFMDPHNSKELVDKTKERYWSPVDVYVGGAEHAVLH 498

Query: 368 LLYARFWHKVLFDIGVVSTKEPFQCVINQGIILGEV 403
           LLYARFWHKVL+DIGVVSTKEPFQ VINQGIILGEV
Sbjct: 499 LLYARFWHKVLYDIGVVSTKEPFQYVINQGIILGEV 534



 Score =  152 bits (384), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 83/96 (86%), Positives = 87/96 (90%)

Query: 1   MRQWMLKITAYADRLFEDLDDLDWPESVKEMQRNWIGRSEGAEMEFCILDNDGKERDINI 60
           +RQWMLKI AYAD L EDLDDLDWPESVKEMQRNWIGRSEGAEMEFCILD+D KERD  I
Sbjct: 212 VRQWMLKIIAYADCLLEDLDDLDWPESVKEMQRNWIGRSEGAEMEFCILDSDVKERDKKI 271

Query: 61  IVYTTRPDTIFGATYLVVAPEHPLLLSLVSVAQSKQ 96
           IVYT RPDTIFGATYLV+APEHPLL SLVS+AQSK 
Sbjct: 272 IVYTARPDTIFGATYLVMAPEHPLLSSLVSIAQSKH 307


>Glyma10g38450.2 
          Length = 1050

 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 91/247 (36%), Gaps = 81/247 (32%)

Query: 60  IIVYTTRPDTIFGATYLVVAPEHPLLLSLVSVAQSKQVEDYVDLASRKSDLERTELQKEK 119
           I+V TTR +T+ G T + V P                                     ++
Sbjct: 324 IVVATTRIETMLGDTAIAVHP-----------------------------------NDDR 348

Query: 120 TGVFTGCYAKNPANGEAIPIWVADYVL--GSYGTGAIMAVPAHDSRDYEFALKYDVPVRW 177
              F G YA +P NG  +PI + D +L    +GTGA+   PAHD  D+E   ++++    
Sbjct: 349 YSHFHGKYAIHPFNGRKLPI-ICDAILVDPKFGTGAVKITPAHDPNDFEVGKRHNLEFIN 407

Query: 178 VVLPDGKSVNESGKAFPG-------EGI---------------------IANSSNKVVGL 209
           V   DGK  +  G  F G       E +                     + + SN VV  
Sbjct: 408 VFTDDGKINSNGGSDFLGMLRFKAREAVAEALQKKDLYRGSENNEMRLGVCSRSNDVVEP 467

Query: 210 DING---LSSKEAALKVIKWAEKSGNGKRKVNYK------------LRDWLFARQRYWGE 254
            I     ++  + A + +  A    N + ++  K            +RDW  +RQ +WG 
Sbjct: 468 MIKPQWYVNCNDLAKQALHAAVDEENKRIEIIPKQYLADWKRWLENIRDWCISRQLWWGH 527

Query: 255 PIPVIFL 261
            IP  ++
Sbjct: 528 QIPAWYV 534


>Glyma10g38450.1 
          Length = 1050

 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 91/247 (36%), Gaps = 81/247 (32%)

Query: 60  IIVYTTRPDTIFGATYLVVAPEHPLLLSLVSVAQSKQVEDYVDLASRKSDLERTELQKEK 119
           I+V TTR +T+ G T + V P                                     ++
Sbjct: 324 IVVATTRIETMLGDTAIAVHP-----------------------------------NDDR 348

Query: 120 TGVFTGCYAKNPANGEAIPIWVADYVL--GSYGTGAIMAVPAHDSRDYEFALKYDVPVRW 177
              F G YA +P NG  +PI + D +L    +GTGA+   PAHD  D+E   ++++    
Sbjct: 349 YSHFHGKYAIHPFNGRKLPI-ICDAILVDPKFGTGAVKITPAHDPNDFEVGKRHNLEFIN 407

Query: 178 VVLPDGKSVNESGKAFPG-------EGI---------------------IANSSNKVVGL 209
           V   DGK  +  G  F G       E +                     + + SN VV  
Sbjct: 408 VFTDDGKINSNGGSDFLGMLRFKAREAVAEALQKKDLYRGSENNEMRLGVCSRSNDVVEP 467

Query: 210 DING---LSSKEAALKVIKWAEKSGNGKRKVNYK------------LRDWLFARQRYWGE 254
            I     ++  + A + +  A    N + ++  K            +RDW  +RQ +WG 
Sbjct: 468 MIKPQWYVNCNDLAKQALHAAVDEENKRIEIIPKQYLADWKRWLENIRDWCISRQLWWGH 527

Query: 255 PIPVIFL 261
            IP  ++
Sbjct: 528 QIPAWYV 534