Miyakogusa Predicted Gene

Lj4g3v0132500.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0132500.1 Non Chatacterized Hit- tr|D7ME59|D7ME59_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,45.03,0.000000000000008,seg,NULL,CUFF.46495.1
         (150 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g39410.1                                                       143   8e-35
Glyma17g01340.1                                                       134   4e-32
Glyma15g11920.1                                                       111   2e-25
Glyma09g01090.1                                                        89   2e-18

>Glyma07g39410.1 
          Length = 207

 Score =  143 bits (360), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 85/154 (55%), Positives = 94/154 (61%), Gaps = 18/154 (11%)

Query: 1   MSQLGLILQESLRNEREARTIFGLLTEQIDAGDTAHXXXXXXXXXXXFTGMGCCGATWVF 60
           MSQLGLILQESLR ERE RTI GLLTEQ+D  D A            FTG+GCCGATWVF
Sbjct: 1   MSQLGLILQESLRTERETRTILGLLTEQMDGVDRAQRRRRTLKERLRFTGIGCCGATWVF 60

Query: 61  RPVRQDHHEEARGEEGTRTVXXXXXXXXXXXXXDPDPLVPECVGPGPSGTGMNLAAALAA 120
           RP+ ++    A+  +                  DP+P  P+ V P PSGT MNLAAALAA
Sbjct: 61  RPIVREEGGGAQAHQ-----------QQTNAAQDPNPNDPKYVSPSPSGTSMNLAAALAA 109

Query: 121 ERQFRGSGESEGE------TPLRVSLMRLLEETE 148
           ERQ R  GE EG       TPLRVSLMRLLEETE
Sbjct: 110 ERQLR-DGEGEGRRVVAPGTPLRVSLMRLLEETE 142


>Glyma17g01340.1 
          Length = 183

 Score =  134 bits (336), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 82/148 (55%), Positives = 90/148 (60%), Gaps = 28/148 (18%)

Query: 1   MSQLGLILQESLRNEREARTIFGLLTEQIDAGDTAHXXXXXXXXXXXFTGMGCCGATWVF 60
           MSQLGLILQESLR EREARTI GLLTEQ+D+                FTG+GCCGATWVF
Sbjct: 1   MSQLGLILQESLRTEREARTILGLLTEQMDSVGRGQRRRRTLKERLRFTGIGCCGATWVF 60

Query: 61  RPVRQDHHEEARGEEGTRTVXXXXXXXXXXXXXDPDPLVPECVGPGPSGTGMNLAAALAA 120
           RP+  +  +                        DP+   PE VGP  S +GMNLAAALAA
Sbjct: 61  RPIETNAGQ------------------------DPNHTGPEHVGPSQSSSGMNLAAALAA 96

Query: 121 ERQFRGSGESEGETPLRVSLMRLLEETE 148
           ERQFR   E EG TPLRVSLMRLLEETE
Sbjct: 97  ERQFR---EGEG-TPLRVSLMRLLEETE 120


>Glyma15g11920.1 
          Length = 209

 Score =  111 bits (278), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/152 (48%), Positives = 82/152 (53%), Gaps = 19/152 (12%)

Query: 1   MSQLGLILQESLRNEREAR-TIFGLLTEQIDAGDTAHXXXXXXXXXXXFTGMGCCGATWV 59
           MSQLG+ LQESLR +REAR TI GLL EQ+D  D              F GMGCCGA+W 
Sbjct: 1   MSQLGVALQESLRTQREARSTILGLLREQMDGVDGGTRRRRSLKERFGFIGMGCCGASWG 60

Query: 60  FRPVRQDHHEEARGEEGTRTVXXXXXXXXXXXXXDPDPLV-PECVGPGPSGTGMNLAAAL 118
           FR               +  +             DP  +  PECVGP  SG+GMNLAAAL
Sbjct: 61  FR---------------SDALSVNQGEQEQQQETDPGRVAAPECVGPAGSGSGMNLAAAL 105

Query: 119 AAERQFRGSGESEG--ETPLRVSLMRLLEETE 148
           AAERQ R   E  G    P RVSLMRLLEETE
Sbjct: 106 AAERQLRVPQEEGGGVRAPWRVSLMRLLEETE 137


>Glyma09g01090.1 
          Length = 196

 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/149 (45%), Positives = 76/149 (51%), Gaps = 30/149 (20%)

Query: 1   MSQLGLILQESLRNEREAR--TIFGLLTEQIDAGDTAHXXXXXXXXXXXFTGMGCCGATW 58
           MSQLG +L    R +RE R  TI GLLTEQ+D  D+             F GMGCCGATW
Sbjct: 1   MSQLGAVL----RTQREPRRSTILGLLTEQMDGVDSGTRRRRSFKERFGFIGMGCCGATW 56

Query: 59  VFRPVRQDHHEEARGEEGTRTVXXXXXXXXXXXXXDPDPLVPECVGPGPSGTGMNLAAAL 118
            FR    D     +GE+  +                     PECVGP   G+GMNLAAAL
Sbjct: 57  GFR---SDALSVTQGEQQQQETD------------------PECVGPAGLGSGMNLAAAL 95

Query: 119 AAERQFRGSGESEGE---TPLRVSLMRLL 144
           AAERQ RG  E       TP RVSLMRLL
Sbjct: 96  AAERQLRGPQEEAVRAPGTPWRVSLMRLL 124