Miyakogusa Predicted Gene

Lj4g3v0120360.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0120360.1 Non Chatacterized Hit- tr|B7FK83|B7FK83_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,93.02,0.000000000000009,no description,NAD(P)-binding
domain; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
NAD(P)-bindin,GO010191.path2.1
         (68 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g01300.2                                                        80   3e-16
Glyma17g01300.1                                                        78   2e-15
Glyma02g13060.1                                                        74   3e-14
Glyma09g01170.2                                                        74   5e-14
Glyma15g11980.1                                                        72   1e-13
Glyma09g01170.1                                                        72   2e-13

>Glyma17g01300.2 
          Length = 203

 Score = 80.5 bits (197), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 39/43 (90%), Positives = 40/43 (93%)

Query: 1  MEIPKRFRGKVAIVTASTQGIGFSIAERLGLEGASVVISSRKQ 43
          ME PKRF GKVAIVTASTQGIG +IAERLGLEGASVVISSRKQ
Sbjct: 1  METPKRFEGKVAIVTASTQGIGLAIAERLGLEGASVVISSRKQ 43


>Glyma17g01300.1 
          Length = 252

 Score = 77.8 bits (190), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/43 (90%), Positives = 40/43 (93%)

Query: 1  MEIPKRFRGKVAIVTASTQGIGFSIAERLGLEGASVVISSRKQ 43
          ME PKRF GKVAIVTASTQGIG +IAERLGLEGASVVISSRKQ
Sbjct: 1  METPKRFEGKVAIVTASTQGIGLAIAERLGLEGASVVISSRKQ 43


>Glyma02g13060.1 
          Length = 110

 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 37/42 (88%), Positives = 39/42 (92%)

Query: 2  EIPKRFRGKVAIVTASTQGIGFSIAERLGLEGASVVISSRKQ 43
          E+ KRF GKVAIVTASTQGIGF+IA RLGLEGASVVISSRKQ
Sbjct: 15 ELGKRFEGKVAIVTASTQGIGFAIAHRLGLEGASVVISSRKQ 56


>Glyma09g01170.2 
          Length = 181

 Score = 73.6 bits (179), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 37/39 (94%), Positives = 38/39 (97%)

Query: 5  KRFRGKVAIVTASTQGIGFSIAERLGLEGASVVISSRKQ 43
          KRF+GKVAIVTAST GIGFSIAERLGLEGASVVISSRKQ
Sbjct: 8  KRFQGKVAIVTASTLGIGFSIAERLGLEGASVVISSRKQ 46


>Glyma15g11980.1 
          Length = 255

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/42 (88%), Positives = 40/42 (95%)

Query: 2  EIPKRFRGKVAIVTASTQGIGFSIAERLGLEGASVVISSRKQ 43
          ++ KRF+GKVAIVTAST GIGFSIAERLGLEGASVVISSRKQ
Sbjct: 5  KLGKRFQGKVAIVTASTLGIGFSIAERLGLEGASVVISSRKQ 46


>Glyma09g01170.1 
          Length = 255

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/39 (94%), Positives = 38/39 (97%)

Query: 5  KRFRGKVAIVTASTQGIGFSIAERLGLEGASVVISSRKQ 43
          KRF+GKVAIVTAST GIGFSIAERLGLEGASVVISSRKQ
Sbjct: 8  KRFQGKVAIVTASTLGIGFSIAERLGLEGASVVISSRKQ 46