Miyakogusa Predicted Gene

Lj4g3v0119570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0119570.1 Non Chatacterized Hit- tr|C5X400|C5X400_SORBI
Putative uncharacterized protein Sb02g041140
OS=Sorghu,75.81,1e-17,seg,NULL; SERINE ENDOPEPTIDASE DEGP2,Serine
endopeptidase DegP2; SERINE PROTEASE FAMILY S1C
HTRA-REL,TC74398.path2.1
         (139 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g00510.1                                                       115   1e-26
Glyma17g09970.1                                                        59   1e-09
Glyma05g01930.1                                                        59   1e-09
Glyma01g16820.1                                                        54   6e-08

>Glyma09g00510.1 
          Length = 528

 Score =  115 bits (288), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/108 (62%), Positives = 76/108 (70%), Gaps = 11/108 (10%)

Query: 32  SSSKNCNLIKKTDNQIRRLPLPALTSYKFRHGGGRTPPVRKAHSPIRYRGAGSDVSHNTA 91
           SS  + +L K    Q+         SYKFR+G  RTP VRK      +R A +  +H TA
Sbjct: 14  SSFCSQSLSKNVSQQLFTSSASVFKSYKFRYG--RTP-VRK------HREANA--THTTA 62

Query: 92  VELALNSVVKVFTVSCSPNYLLPWQNKAQRETMGSGFVILGRKILTNA 139
           VELA NSVVK+FTVSCSPNYLLPWQNK+QRETMGSGFVILGRKILTNA
Sbjct: 63  VELAFNSVVKIFTVSCSPNYLLPWQNKSQRETMGSGFVILGRKILTNA 110


>Glyma17g09970.1 
          Length = 576

 Score = 59.3 bits (142), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/45 (60%), Positives = 33/45 (73%)

Query: 95  ALNSVVKVFTVSCSPNYLLPWQNKAQRETMGSGFVILGRKILTNA 139
           A++SVVKVF V   PN+ LPWQ K Q  +  SGFVI GR++LTNA
Sbjct: 112 AMDSVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVIGGRRVLTNA 156


>Glyma05g01930.1 
          Length = 584

 Score = 59.3 bits (142), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/45 (60%), Positives = 33/45 (73%)

Query: 95  ALNSVVKVFTVSCSPNYLLPWQNKAQRETMGSGFVILGRKILTNA 139
           A++SVVKVF V   PN+ LPWQ K Q  +  SGFVI GR++LTNA
Sbjct: 120 AMDSVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVIGGRRVLTNA 164


>Glyma01g16820.1 
          Length = 544

 Score = 53.5 bits (127), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 36/62 (58%)

Query: 78  RYRGAGSDVSHNTAVELALNSVVKVFTVSCSPNYLLPWQNKAQRETMGSGFVILGRKILT 137
           R   +  D +    V  ++ +VVKVF V   PN+ LPWQ K Q  +  SG ++ GR++LT
Sbjct: 63  RLADSKGDCTAAVKVVPSMEAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGLIVGGRRVLT 122

Query: 138 NA 139
           NA
Sbjct: 123 NA 124