Miyakogusa Predicted Gene

Lj4g3v0094910.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0094910.3 Non Chatacterized Hit- tr|E0VZ46|E0VZ46_PEDHC
snRNA-activating protein complex subunit, putative
OS=,26.4,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,snRNA-activating protein complex, subunit 3; seg,NULL;
zf,CUFF.46395.3
         (361 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g40040.1                                                       528   e-150
Glyma17g00780.1                                                       174   2e-43

>Glyma07g40040.1 
          Length = 435

 Score =  528 bits (1360), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 252/362 (69%), Positives = 294/362 (81%), Gaps = 3/362 (0%)

Query: 1   MDMAFKQVFEGRXXXXXXXXXXXXXXTG-CHVXXXXXXXXXXXXAILDSDCLDKVEQIVT 59
           MDMA K+VF+GR                                ++L+SDC++KVEQ+V 
Sbjct: 76  MDMALKEVFQGRENDENHPPLLDQPNASRFGEKKSNRKRKGTNDSVLESDCIEKVEQVVR 135

Query: 60  IKRNQEEDMAAARLHSFNPVCRTNESSGKSLRTERMMALRSTSSTRKVNSGGLHEHTPVQ 119
           IK+ QEED A+ +LHSF+   R NE+  KS RTERM  LRSTSSTRKVN+  L EH PV 
Sbjct: 136 IKQKQEEDKASVKLHSFDR--RINEAVHKSTRTERMRTLRSTSSTRKVNTASLQEHLPVL 193

Query: 120 YPEVVLSVEIYHNVRKGLKTQELLVLGRQTLTSLRDKIFCSTDQVMQKAGQHDPSGFFLI 179
           YPEVVLSVE+YHNVRKG K QELLVLG QTLT+LRDKIFCSTDQVM KAGQHDPSG+FLI
Sbjct: 194 YPEVVLSVEVYHNVRKGTKIQELLVLGGQTLTALRDKIFCSTDQVMHKAGQHDPSGYFLI 253

Query: 180 EDIFYTDLRDPSAIDLTRPILDWVQNSNEEAQKKWEYIITGELKQKQKAIMGTVSTPRMP 239
           ED+F  DLRDPSAIDLTRPILDW+++S EEAQKKWEYIITGEL++KQKAIMG  S  ++P
Sbjct: 254 EDVFCPDLRDPSAIDLTRPILDWLRDSKEEAQKKWEYIITGELQKKQKAIMGEKSASQLP 313

Query: 240 HFSSIEMHKIRFCDLSFRLGAGYLYCHQGECSHTLVVRDMRLMHPDDVNNRAVYPRVTFQ 299
           HF SIEMHKIRFCDLSF+LGAGYLYCHQG+C+HTLV+RDMRL+HP+DV+NRAVYP +TFQ
Sbjct: 314 HFRSIEMHKIRFCDLSFQLGAGYLYCHQGDCTHTLVIRDMRLIHPEDVHNRAVYPIITFQ 373

Query: 300 LKLRFQKCRVCKIFRATKVTVDDRWTSENPCYFCDDCFALLHLAEDGSPLYTEYLEYDYH 359
           LKLRFQKC VCKIFRATKVTVDD+WT ENPCYFCD+CF+LLH A+DG+ LYT+++EYDY+
Sbjct: 374 LKLRFQKCNVCKIFRATKVTVDDKWTPENPCYFCDECFSLLHQADDGTLLYTDFVEYDYN 433

Query: 360 HD 361
           HD
Sbjct: 434 HD 435


>Glyma17g00780.1 
          Length = 163

 Score =  174 bits (440), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 72/95 (75%), Positives = 89/95 (93%)

Query: 267 QGECSHTLVVRDMRLMHPDDVNNRAVYPRVTFQLKLRFQKCRVCKIFRATKVTVDDRWTS 326
           QG+C+HTLV+RDMRL+HPDDV+NRAVYP +TFQLKLRFQKC VCKIFRA K TVDD+WT 
Sbjct: 69  QGDCTHTLVIRDMRLIHPDDVHNRAVYPIITFQLKLRFQKCSVCKIFRAAKATVDDKWTP 128

Query: 327 ENPCYFCDDCFALLHLAEDGSPLYTEYLEYDYHHD 361
           ENPCYFC++CF+LLH A+DG+PLYT+++E+DY+HD
Sbjct: 129 ENPCYFCEECFSLLHQAKDGTPLYTDFVEFDYNHD 163