Miyakogusa Predicted Gene

Lj4g3v0073690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0073690.1 Non Chatacterized Hit- tr|I1K4D0|I1K4D0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,82.79,0,DNA
DAMAGE-BINDING PROTEIN 1 (DAMAGE-SPECIFIC DNA-BINDING PROTEIN
1)(UV-DAMAGED DNA-BINDING
FACTOR),,NODE_47381_length_996_cov_13.278112.path1.1
         (308 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g30530.1                                                       488   e-138
Glyma08g13680.1                                                       487   e-138
Glyma12g08320.1                                                        75   1e-13
Glyma02g38780.1                                                        57   2e-08
Glyma20g38460.1                                                        57   3e-08
Glyma10g43750.1                                                        56   4e-08

>Glyma05g30530.1 
          Length = 1089

 Score =  488 bits (1256), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 238/308 (77%), Positives = 256/308 (83%), Gaps = 9/308 (2%)

Query: 1   MSEWNYVVTAHKPTKVTHSCVGNFTGPQDRNLIVAKCTRLEIHXXXXXXXXXXXXXXXXX 60
           MS WNYVVTAHKPT VTHSCVGNFT PQD NLI+AKCTR+EIH                 
Sbjct: 1   MSIWNYVVTAHKPTNVTHSCVGNFTSPQDLNLIIAKCTRIEIHLLSPQGLQPML------ 54

Query: 61  XDVPIYGRIAILQLFRPHGEAQECLFVVTEKYKFCVLQWDRETHQLVTRAMGDVYDRIGR 120
            DVPIYGRIA L+LFRPHGEAQ+ LF+ TE+YKFCVLQWD ET +LVTRAMGDV DRIGR
Sbjct: 55  -DVPIYGRIATLELFRPHGEAQDYLFIATERYKFCVLQWDSETAELVTRAMGDVSDRIGR 113

Query: 121 PTDNGQIGIVDPDCRLIGLRLYDGLFKVIPFDHNGQLKEAFNIKLQELDVLDIKFLYGCS 180
           PTDNGQIGI+DPDCRLIGL LYDGLFKVIPFD+ GQLKEAFNI+L+EL VLDIKFLYGCS
Sbjct: 114 PTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCS 173

Query: 181 KPTIVVLYQDNKNARHVKTYEVDLQDKNFVGGPWSQNNLDNGANLLIPVPPPLCGVLIIG 240
           KPTIVVLYQDNK+ARHVKTYEV L+DK+F+ GPWSQNNLDNGA+LLIPVPPPLCGVLIIG
Sbjct: 174 KPTIVVLYQDNKDARHVKTYEVALKDKDFLEGPWSQNNLDNGADLLIPVPPPLCGVLIIG 233

Query: 241 EETIVYCSATAFKAIPIKLGPSLTKAYGRVDSDGSRYXXXXXXXXXXXXXXXHEKEKVTG 300
           EETIVYCSA AFKAIPI+  PS+TKAYGRVD DGSRY               HEKEKVTG
Sbjct: 234 EETIVYCSANAFKAIPIR--PSITKAYGRVDPDGSRYLLGDHTGLLSLLVITHEKEKVTG 291

Query: 301 LKIEPLGE 308
           LKIEPLGE
Sbjct: 292 LKIEPLGE 299


>Glyma08g13680.1 
          Length = 1089

 Score =  487 bits (1254), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 238/308 (77%), Positives = 256/308 (83%), Gaps = 9/308 (2%)

Query: 1   MSEWNYVVTAHKPTKVTHSCVGNFTGPQDRNLIVAKCTRLEIHXXXXXXXXXXXXXXXXX 60
           M+ WNYVVTAHKPT VTHSCVGNFT PQD NLI+AKCTR+EIH                 
Sbjct: 1   MTIWNYVVTAHKPTNVTHSCVGNFTSPQDLNLIIAKCTRIEIHLLSPQGLQPML------ 54

Query: 61  XDVPIYGRIAILQLFRPHGEAQECLFVVTEKYKFCVLQWDRETHQLVTRAMGDVYDRIGR 120
            DVPIYGRIA L+LFRPHGEAQ+ LF+ TE+YKFCVLQWD ET +LVTRAMGDV DRIGR
Sbjct: 55  -DVPIYGRIATLELFRPHGEAQDYLFIATERYKFCVLQWDSETGELVTRAMGDVSDRIGR 113

Query: 121 PTDNGQIGIVDPDCRLIGLRLYDGLFKVIPFDHNGQLKEAFNIKLQELDVLDIKFLYGCS 180
           PTDNGQIGI+DPDCRLIGL LYDGLFKVIPFD+ GQLKEAFNI+L+EL VLDIKFLYGCS
Sbjct: 114 PTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCS 173

Query: 181 KPTIVVLYQDNKNARHVKTYEVDLQDKNFVGGPWSQNNLDNGANLLIPVPPPLCGVLIIG 240
           KPTIVVLYQDNK+ARHVKTYEV L+DK+FV GPWSQNNLDNGA+LLIPVPPPLCGVLIIG
Sbjct: 174 KPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIG 233

Query: 241 EETIVYCSATAFKAIPIKLGPSLTKAYGRVDSDGSRYXXXXXXXXXXXXXXXHEKEKVTG 300
           EETIVYCSA AFKAIPI+  PS+TKAYGRVD DGSRY               HEKEKVTG
Sbjct: 234 EETIVYCSANAFKAIPIR--PSITKAYGRVDPDGSRYLLGDHTGLVSLLVIIHEKEKVTG 291

Query: 301 LKIEPLGE 308
           LKIEPLGE
Sbjct: 292 LKIEPLGE 299


>Glyma12g08320.1 
          Length = 40

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/40 (77%), Positives = 35/40 (87%)

Query: 1  MSEWNYVVTAHKPTKVTHSCVGNFTGPQDRNLIVAKCTRL 40
          M+ WNYVVTAHKPT VTHSCVGNFT P+D  LI+AKCTR+
Sbjct: 1  MTIWNYVVTAHKPTNVTHSCVGNFTSPRDLYLIIAKCTRI 40


>Glyma02g38780.1 
          Length = 33

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/31 (74%), Positives = 27/31 (87%)

Query: 79  GEAQECLFVVTEKYKFCVLQWDRETHQLVTR 109
           GEAQ+ LF+ TE+YKFCVLQWD ET +LVTR
Sbjct: 1   GEAQDYLFIATERYKFCVLQWDSETSELVTR 31


>Glyma20g38460.1 
          Length = 1214

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 111/271 (40%), Gaps = 47/271 (17%)

Query: 6   YVVTAHKPTKVTHSCVGNFTGPQDRNLIVAKCTRLEIHXXXXXXXXXXXXXXXXXXDVPI 65
           Y +T  +PT +  +  GNF+G + + ++VA+   L++                    V I
Sbjct: 4   YSLTLQRPTGIICAINGNFSGGKSQEIVVARGKVLDL------LRPDDNGRIQTILSVEI 57

Query: 66  YGRIAILQLFRPHGEAQECLFVVTEKYKFCVLQWDRETHQLVTRAMGDVYDRIGRPTDN- 124
           +G I  L  FR  G  ++ + V ++  +  +L++++E          +V+D+I + T   
Sbjct: 58  FGAIRSLAQFRLMGAQKDYIVVGSDSGRIVILEYNKEK---------NVFDKIHQETFGK 108

Query: 125 --------GQIGIVDPDCR--LIGLRLYDGLFKVIPFDHNGQLKEAFNIKLQELDVLDIK 174
                   GQ   +DP  R  +IG      L  V+  D   +L  +  ++  +   L   
Sbjct: 109 SGCRRIVPGQYLAIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTLVYS 168

Query: 175 FL---YGCSKPTIVVLYQDNKNA-------------RHVKTYEVDLQDKNFVGGPWSQNN 218
                 G   P    +  D   A             +H+  YE+DL   N V   WS+  
Sbjct: 169 ICGVDCGFENPIFAAIELDYSEADQDSTGLAASEAQKHLTFYELDL-GLNHVSRKWSE-Q 226

Query: 219 LDNGANLLIPVP---PPLCGVLIIGEETIVY 246
           +DNGANLL+ VP       GVL+  E  ++Y
Sbjct: 227 VDNGANLLVTVPGGGDGPSGVLVCAENFVIY 257


>Glyma10g43750.1 
          Length = 1214

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 111/271 (40%), Gaps = 47/271 (17%)

Query: 6   YVVTAHKPTKVTHSCVGNFTGPQDRNLIVAKCTRLEIHXXXXXXXXXXXXXXXXXXDVPI 65
           Y +T  +PT +  +  GNF+G + + ++VA+   L++                    V I
Sbjct: 4   YSLTLQRPTGIICAINGNFSGGKSQEIVVARGKVLDL------LRPDDNGRIQTILSVEI 57

Query: 66  YGRIAILQLFRPHGEAQECLFVVTEKYKFCVLQWDRETHQLVTRAMGDVYDRIGRPTDN- 124
           +G I  L  FR  G  ++ + V ++  +  +L++++E          +V+D+I + T   
Sbjct: 58  FGAIRSLAQFRLMGAQKDYIVVGSDSGRIIILEYNKEK---------NVFDKIHQETFGK 108

Query: 125 --------GQIGIVDPDCR--LIGLRLYDGLFKVIPFDHNGQLKEAFNIKLQELDVLDIK 174
                   GQ   +DP  R  +IG      L  V+  D   +L  +  ++  +   L   
Sbjct: 109 SGCRRIVPGQYLAIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTLVYS 168

Query: 175 FL---YGCSKPTIVVLYQDNKNA-------------RHVKTYEVDLQDKNFVGGPWSQNN 218
                 G   P    +  D   A             +H+  YE+DL   N V   WS+  
Sbjct: 169 ICGVDCGFENPIFAAIELDYSEADQDSTGQAASEAQKHLTFYELDL-GLNHVSRKWSE-Q 226

Query: 219 LDNGANLLIPVP---PPLCGVLIIGEETIVY 246
           +DNGANLL+ VP       GVL+  E  ++Y
Sbjct: 227 VDNGANLLVTVPGGGDGPSGVLVCAENFVIY 257