Miyakogusa Predicted Gene

Lj4g3v0073480.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0073480.1 Non Chatacterized Hit- tr|A5B095|A5B095_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,85.45,1e-18,Vps53_N,Vps53-like,
N-terminal,gene.Ljchr4_pseudomol_20120830.path1.gene105.1
         (135 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g02140.1                                                       132   2e-31
Glyma15g13040.1                                                       129   1e-30

>Glyma09g02140.1 
          Length = 820

 Score =  132 bits (331), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/129 (62%), Positives = 81/129 (62%), Gaps = 44/129 (34%)

Query: 1   MFPNEASLSGVEPLMQKIQNEIRTVDAGILSAVRQQSNSGTKAKEDLAAATCAV-ELTYH 59
           MFPNEASLSGVEPLMQKIQNEIRTVDAGIL+AVRQQSNSGTKAKEDLAAAT AV EL Y 
Sbjct: 13  MFPNEASLSGVEPLMQKIQNEIRTVDAGILAAVRQQSNSGTKAKEDLAAATRAVEELMYK 72

Query: 60  -------------------------------------------MAVSAVEQLQVMASKRQ 76
                                                      M VSAVEQLQVMASKRQ
Sbjct: 73  IREIKTKAVQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSAVEQLQVMASKRQ 132

Query: 77  YKEAAAQLE 85
           YKEAAAQLE
Sbjct: 133 YKEAAAQLE 141


>Glyma15g13040.1 
          Length = 820

 Score =  129 bits (324), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/129 (60%), Positives = 80/129 (62%), Gaps = 44/129 (34%)

Query: 1   MFPNEASLSGVEPLMQKIQNEIRTVDAGILSAVRQQSNSGTKAKEDLAAATCAV-ELTYH 59
           MFPNE SLSGVEPLMQKIQNEIRTVDAGIL+AVRQQSNSGTKAKEDLAAAT AV EL Y 
Sbjct: 13  MFPNEVSLSGVEPLMQKIQNEIRTVDAGILAAVRQQSNSGTKAKEDLAAATRAVEELMYK 72

Query: 60  -------------------------------------------MAVSAVEQLQVMASKRQ 76
                                                      M VSAVEQLQVMASKRQ
Sbjct: 73  IREIKTKAVQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSAVEQLQVMASKRQ 132

Query: 77  YKEAAAQLE 85
           Y+EAAAQLE
Sbjct: 133 YREAAAQLE 141