Miyakogusa Predicted Gene

Lj4g3v0071130.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0071130.1 tr|I0YUU2|I0YUU2_9CHLO DNA glycosylase
OS=Coccomyxa subellipsoidea C-169 PE=4 SV=1,38.1,3e-18,HhH-GPD,HhH-GPD
domain; no description,DNA glycosylase; seg,NULL; N-GLYCOSYLASE/DNA
LYASE,NULL; DNA-,NODE_64322_length_1836_cov_9.519608.path1.1
         (484 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g02180.1                                                       556   e-158
Glyma09g02180.2                                                       468   e-132

>Glyma09g02180.1 
          Length = 443

 Score =  556 bits (1432), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 295/446 (66%), Positives = 337/446 (75%), Gaps = 35/446 (7%)

Query: 43  FRLDQAVCSHGLFMMAPNSWDPLSNTLTRPLRLHDQDTDXXXXXXXFIVTVSQRSESIAV 102
           F+L+QAVCSHGLFMM PN WDPLS TL RPLR              F+V++SQ S+S+AV
Sbjct: 24  FQLEQAVCSHGLFMMPPNHWDPLSKTLIRPLR---------SSPSSFLVSLSQHSQSLAV 74

Query: 103 RVHHGTHLLSPHEVRALMAQVSRMLRFSEAEEEAVRGFRSM-PLDHHNRSFGGRVFRSPT 161
           RVH  TH LSP +   + AQVSRMLRFSEAEE+AVR FRS+  +DH NRSF GRVFRSPT
Sbjct: 75  RVH-ATHALSPQQQNHITAQVSRMLRFSEAEEKAVREFRSLHVVDHPNRSFSGRVFRSPT 133

Query: 162 LFEDMVKCILLCNCQWPRTLSMXXXXXXXXXXXXKGSPHDAVAASGNLKVKTSDFSPKTP 221
           LFEDMVKCILLCNCQWPRTLSM             GSP   +A SGN K ++  F PKTP
Sbjct: 134 LFEDMVKCILLCNCQWPRTLSMAQALCELQLELQNGSP-CTIAVSGNSKGESEGFIPKTP 192

Query: 222 AARETGRKGVNSSGVSRKGMFVKKKLEFERDDISQMDHVLESRSNAALLPTDINGNAGHG 281
           A++ET R     + VS KGMF KKKLE   D   Q+DHV+ S S A  L T  NG+    
Sbjct: 193 ASKETRR-----NKVSTKGMFCKKKLEL--DGNLQIDHVVASSSTATTLLTTDNGD---- 241

Query: 282 CNSCQATEELDSDDT---FPDGREYFNRTGNFPSPSELANLDESFLANRCKLGYRASYII 338
                 +EEL S D+   F +G EYF+RTGNFPSPSELANLDESFLA RC LGYRA YII
Sbjct: 242 ------SEELRSHDSCHEFSNGNEYFSRTGNFPSPSELANLDESFLAKRCGLGYRAGYII 295

Query: 339 KLARAIVEGKIQLRQLEELSEGASLSIYTQLDDQLKQIKGFGPFTRANVLMCMGYYHVIP 398
           +LARAIVEGKIQL QLEELS+ ASLS Y QLDDQLKQI+G+GPFTRANVLMC+GYYHVIP
Sbjct: 296 ELARAIVEGKIQLGQLEELSKDASLSNYKQLDDQLKQIRGYGPFTRANVLMCLGYYHVIP 355

Query: 399 TDSETIRHLKQVHSRNSTSRTIERDVEEIYGKYEPYQFLAYWSEIWDFYERRFGKMNEMH 458
           TDSET+RHLKQVHSR +TS+TIER++EEIYGKYEPYQFLA+WSE+WDFYE RFGK+NEMH
Sbjct: 356 TDSETVRHLKQVHSRYTTSKTIERELEEIYGKYEPYQFLAFWSEVWDFYETRFGKLNEMH 415

Query: 459 SSEYKLITAANMRSAGKSPSKRKRAT 484
           SS+YKLITA NMRS   + +KRKR +
Sbjct: 416 SSDYKLITACNMRS---TTNKRKRPS 438


>Glyma09g02180.2 
          Length = 347

 Score =  468 bits (1204), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 248/363 (68%), Positives = 281/363 (77%), Gaps = 25/363 (6%)

Query: 126 MLRFSEAEEEAVRGFRSM-PLDHHNRSFGGRVFRSPTLFEDMVKCILLCNCQWPRTLSMX 184
           MLRFSEAEE+AVR FRS+  +DH NRSF GRVFRSPTLFEDMVKCILLCNCQWPRTLSM 
Sbjct: 1   MLRFSEAEEKAVREFRSLHVVDHPNRSFSGRVFRSPTLFEDMVKCILLCNCQWPRTLSMA 60

Query: 185 XXXXXXXXXXXKGSPHDAVAASGNLKVKTSDFSPKTPAARETGRKGVNSSGVSRKGMFVK 244
                       GSP   +A SGN K ++  F PKTPA++ET R     + VS KGMF K
Sbjct: 61  QALCELQLELQNGSPC-TIAVSGNSKGESEGFIPKTPASKETRR-----NKVSTKGMFCK 114

Query: 245 KKLEFERDDISQMDHVLESRSNAALLPTDINGNAGHGCNSCQATEELDSDDT---FPDGR 301
           KKLE   D   Q+DHV+ S S A  L T  NG+          +EEL S D+   F +G 
Sbjct: 115 KKLEL--DGNLQIDHVVASSSTATTLLTTDNGD----------SEELRSHDSCHEFSNGN 162

Query: 302 EYFNRTGNFPSPSELANLDESFLANRCKLGYRASYIIKLARAIVEGKIQLRQLEELSEGA 361
           EYF+RTGNFPSPSELANLDESFLA RC LGYRA YII+LARAIVEGKIQL QLEELS+ A
Sbjct: 163 EYFSRTGNFPSPSELANLDESFLAKRCGLGYRAGYIIELARAIVEGKIQLGQLEELSKDA 222

Query: 362 SLSIYTQLDDQLKQIKGFGPFTRANVLMCMGYYHVIPTDSETIRHLKQVHSRNSTSRTIE 421
           SLS Y QLDDQLKQI+G+GPFTRANVLMC+GYYHVIPTDSET+RHLKQVHSR +TS+TIE
Sbjct: 223 SLSNYKQLDDQLKQIRGYGPFTRANVLMCLGYYHVIPTDSETVRHLKQVHSRYTTSKTIE 282

Query: 422 RDVEEIYGKYEPYQFLAYWSEIWDFYERRFGKMNEMHSSEYKLITAANMRSAGKSPSKRK 481
           R++EEIYGKYEPYQFLA+WSE+WDFYE RFGK+NEMHSS+YKLITA NMRS   + +KRK
Sbjct: 283 RELEEIYGKYEPYQFLAFWSEVWDFYETRFGKLNEMHSSDYKLITACNMRS---TTNKRK 339

Query: 482 RAT 484
           R +
Sbjct: 340 RPS 342