Miyakogusa Predicted Gene

Lj4g3v0049640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0049640.1 Non Chatacterized Hit- tr|I1KNQ6|I1KNQ6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42426
PE,83.97,0,GTP-BINDING PROTEIN ENGA,GTP-binding protein EngA;
MSS1/TRME-RELATED GTP-BINDING PROTEIN,NULL; P-loo,CUFF.46576.1
         (387 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g40160.1                                                       601   e-172
Glyma17g00640.1                                                       396   e-110
Glyma12g06150.1                                                       136   3e-32
Glyma11g14170.1                                                       102   5e-22
Glyma11g30440.1                                                        69   1e-11
Glyma06g11130.1                                                        60   6e-09
Glyma04g11560.1                                                        60   6e-09

>Glyma07g40160.1 
          Length = 545

 Score =  601 bits (1550), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 303/393 (77%), Positives = 327/393 (83%), Gaps = 15/393 (3%)

Query: 1   MNKSEXXXXXXXXXXXXGNEMCRLGFGDPIAISAETGLGMHDLYLSLKPLLEDYMLRVLN 60
           MNKSE             NEMCRLGFGDPIAISAETGLGMHDLY+SLKPLLEDYMLRV  
Sbjct: 162 MNKSESLFDATGSLASAANEMCRLGFGDPIAISAETGLGMHDLYMSLKPLLEDYMLRVF- 220

Query: 61  VNDEGAQENSNS--EDTSSPEAEESKLPLQLAIVGRPNVGKSTLMNTLLQEDRVLVGPEA 118
             +EGA+ENS++  ED+S  + ++SKLPLQLAIVGRPNVGKSTL+N LLQEDRVLVGPEA
Sbjct: 221 -TEEGARENSHNEVEDSSDLDVDKSKLPLQLAIVGRPNVGKSTLLNALLQEDRVLVGPEA 279

Query: 119 GLTRDSIRTQFEFEGRTIYLVDTAGWLQRTKQEKGAASLSIMQSRKSLLRAHVVALVLDA 178
           GLTRDSIRTQFEF+GRTIYLVDTAGWLQRTKQEKGAASLSIMQSRKSLLRAH++ALVLDA
Sbjct: 280 GLTRDSIRTQFEFQGRTIYLVDTAGWLQRTKQEKGAASLSIMQSRKSLLRAHIIALVLDA 339

Query: 179 EEIINERRSMKHAEVVIARRAVEEGRGLVVIVNKMDLLRG--KASSFEKVMXXXXXXXXX 236
           EEIIN RRSMKHAEVVIARRAVEEGRGLVVIVNKMDLLRG  K+SS+EKVM         
Sbjct: 340 EEIINARRSMKHAEVVIARRAVEEGRGLVVIVNKMDLLRGKHKSSSYEKVMEVVPQEIQT 399

Query: 237 XXXXXXXXXXXFTSALEGRGRTAVLEQVIDTYEKWCSRLSTARLNRWMQKVMSRHSWKDQ 296
                      F SALEGRGRT VL QVIDTYEKWCSRL TARLNRW       HSWKDQ
Sbjct: 400 IIPQVTGIPVVFISALEGRGRTTVLNQVIDTYEKWCSRLPTARLNRW-------HSWKDQ 452

Query: 297 AAQPKIKYFTQVKARPPTFVAFLRGKTQLADTDIRFLTKSLKEDFDLGGIPIRIMQRAVT 356
           AAQPK+KYFTQVKARPPTFVAF+RGKTQL+DTDIRFLTKSLKEDFDLGGIPIRIMQR+VT
Sbjct: 453 AAQPKVKYFTQVKARPPTFVAFVRGKTQLSDTDIRFLTKSLKEDFDLGGIPIRIMQRSVT 512

Query: 357 KKEV--SGNSKSGHSAGRVAERMMSDKRSVLAE 387
           KK+   SGNSK+ HS  RV ER +SDKRS++ E
Sbjct: 513 KKDASGSGNSKNSHSVCRVVERTVSDKRSIVDE 545


>Glyma17g00640.1 
          Length = 308

 Score =  396 bits (1018), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 219/336 (65%), Positives = 244/336 (72%), Gaps = 40/336 (11%)

Query: 64  EGAQENSNSE--DTSSPEAEESKLPLQLAIVGRPNVGKSTLMNTLLQEDRVLVGPEAGLT 121
           EGA   S+ E  D+   + ++SKLPLQLAI+GRPNVGKSTL+N LLQED VLVGPEAGLT
Sbjct: 1   EGACLYSHHEVEDSCDLDVDKSKLPLQLAILGRPNVGKSTLLNALLQEDHVLVGPEAGLT 60

Query: 122 RDSIRTQFEFEGRTIYLVDTAGWLQRTKQEKGAASLSIMQSRKSLLRAHVVALVLDAEEI 181
           RDSIRTQFEF+GRTIYLVDTAGWLQ        ++  IMQSRKSLL+AH++ALVLDAEEI
Sbjct: 61  RDSIRTQFEFQGRTIYLVDTAGWLQM------QSTPGIMQSRKSLLQAHIIALVLDAEEI 114

Query: 182 INERRSMKHAEVVIARRAVEEGRGLVVIVNKMDLLRGK--ASSFEKVMXXXXXXXXXXXX 239
           IN RRSMKHAEV+IAR AVEEGRGLVVIVNKM+L RGK  +SS+EKVM            
Sbjct: 115 INARRSMKHAEVIIARWAVEEGRGLVVIVNKMNLPRGKHQSSSYEKVMEIVPQEIQTIIP 174

Query: 240 XXXXXXXXFTSALEGRGRTAVLEQVIDTYEKW----CSRLSTARLNRWMQKVMSRHSWKD 295
                   F SALEGRGRT VL QVI+TYEKW     S LS          VMSRHSWK 
Sbjct: 175 QVKGIPVVFISALEGRGRTTVLNQVIETYEKWQLVHPSLLSVT--------VMSRHSWKG 226

Query: 296 QAAQPKIKYFTQVKARPPTFVAFLRGKTQLADTDIRFLTKSLKEDFDLGGIPIRIMQRAV 355
           QAAQPK+KYFTQVKARPPTFVA              FLTKSLKE+FDLGGIPIR+MQR V
Sbjct: 227 QAAQPKVKYFTQVKARPPTFVA--------------FLTKSLKENFDLGGIPIRLMQRFV 272

Query: 356 TKKEVSGN----SKSGHSAGRVAERMMSDKRSVLAE 387
           TKK+ SG+    SK+ HS GRV ER +SDKRSVL E
Sbjct: 273 TKKDASGSETRTSKNSHSVGRVIERTVSDKRSVLVE 308


>Glyma12g06150.1 
          Length = 632

 Score =  136 bits (343), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 185/379 (48%), Gaps = 48/379 (12%)

Query: 18  GNEMCRLGFGDPIAISAETGLGMHDLYLSLKPLLEDYMLRVLNVNDEGAQENSNSEDTSS 77
            +E   LGF +P+ ISA +G G  +L               L++   G Q+   S +   
Sbjct: 289 ASEFWSLGF-EPLPISAISGTGTGEL---------------LDLVCSGLQKIEESNNL-- 330

Query: 78  PEAEESKLPLQLAIVGRPNVGKSTLMNTLLQEDRVLVGPEAGLTRDSIRTQFE-FEGRTI 136
              EE  +P  ++IVGRPNVGKS+++N L+ EDR +V P +G TRD+I T+F   +G+  
Sbjct: 331 --VEEDYVP-AISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPDGQKF 387

Query: 137 YLVDTAGWLQRTKQEKGAAS---LSIMQSRKSLLRAHVVALVLDAEEIINERRSMKHAEV 193
            L+DTAG  +RT      ++   LS+ ++ +++ R+ VVALV++A   I E+      + 
Sbjct: 388 QLIDTAGIRKRTAIASAGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQ------DY 441

Query: 194 VIARRAVEEGRGLVVIVNKMDLLRGK----ASSFEKVMXXXXXXXXXXXXXXXXXXXXFT 249
            IA R  +EG+G V++VNK D +  K    AS +E+                      ++
Sbjct: 442 KIAERIEKEGKGCVIVVNKWDTIPNKNQQTASYYEQ-------DVREKLRSLVWAPIVYS 494

Query: 250 SALEGRGRTAVLEQVIDTYEKWCSRLSTARLNRWMQKVMSRHSWKDQ--AAQPKIKYFTQ 307
           +A+ G     ++   I+  ++   RL T+ LN+ +Q+ +            + ++ Y TQ
Sbjct: 495 TAVAGHSVDKIIVAAIEVEKERSRRLGTSILNQVVQEAVGFKPPPRTRGGKRGRVYYCTQ 554

Query: 308 VKARPPTFVAFLRGKTQLADTDIRFLTKSLKEDFDLGGIPIRIMQRAVTKKEVSGNSKSG 367
              RPPTFV F+       +T  R++ K L+ D    G PIR++ R+  K         G
Sbjct: 555 AAIRPPTFVFFVNDAKLFPETYRRYMEKQLRTDAGFSGTPIRLLWRSRRKM----GKDEG 610

Query: 368 HSAGRVAERMMSDKRSVLA 386
               +  E + S+ R +++
Sbjct: 611 KPVTKTRENLTSNDRKLVS 629



 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 1/67 (1%)

Query: 85  LPLQLAIVGRPNVGKSTLMNTLLQEDRVLVGPEAGLTRDSIRTQFEFEGRTIYLVDTAGW 144
           LP ++AIVGRPNVGKS L N L+  +R +V  E G+TRD +  +  +      +VDT G 
Sbjct: 129 LP-RVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSYWGEHEFMVVDTGGV 187

Query: 145 LQRTKQE 151
           +  +K +
Sbjct: 188 ITVSKSQ 194


>Glyma11g14170.1 
          Length = 430

 Score =  102 bits (255), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 136/278 (48%), Gaps = 27/278 (9%)

Query: 70  SNSEDTSSPEAEESKLPLQLAIVGRPNVGKSTLMNTLLQEDRVLVGPEAGLTRDSIRTQF 129
           S S+  S+   EE      ++IVGRPNVGKS+++N L+ EDR +V P +  TRD+I T+F
Sbjct: 168 SMSDHKSNNLVEEEDYVPAISIVGRPNVGKSSILNALVGEDRTIVSPISCTTRDAIDTEF 227

Query: 130 EF-EGRTIYLVDTAGWLQRTKQEKGAASLSIMQSRKSLLRAHVVALVLDAEEIINERRSM 188
              +G+   L+DTAG  +R+         +I        R+ VVALV++A   I E+   
Sbjct: 228 TGPDGQKFQLIDTAGIRKRSAIASAGTFCAIR-------RSDVVALVIEAMACITEQ--- 277

Query: 189 KHAEVVIARRAVEEGRGLVVIVNKMDLLRGK----ASSFEKVMXXXXXXXXXXXXXXXXX 244
              E  IA R  +EG+G V++VNK D +  K    AS +E+                   
Sbjct: 278 ---EYNIAERIEKEGKGCVIVVNKWDTIPNKNQQTASYYEQ-------DVREKLRSLDWA 327

Query: 245 XXXFTSALEGRGRTAVLEQVIDTYEKWCSRLSTARLNRWMQKVMS-RHSWKDQAAQ-PKI 302
              +++ + G     ++    +  ++   RL T+ LN+ +Q+ +  +   + +  +  ++
Sbjct: 328 PIVYSTVVAGHSVGKIIVAASEVEKERSRRLGTSTLNQVVQEAVGFKPPPRTRGGKGGRV 387

Query: 303 KYFTQVKARPPTFVAFLRGKTQLADTDIRFLTKSLKED 340
            Y TQ   +PPTFV F+       +T  R++ K  + D
Sbjct: 388 YYCTQAAIKPPTFVFFVNDGKLFPETYRRYMEKQHRSD 425


>Glyma11g30440.1 
          Length = 227

 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 4/96 (4%)

Query: 87  LQLAIVGRPNVGKSTLMNTLLQEDRVLVGPEAGLTRDSIRTQFE-FEGRTIYLVDTAGWL 145
           L ++IVGRPNV KST++N L+ EDR +  P +G TRD+I T+F   +G+   L+DTAG  
Sbjct: 94  LAISIVGRPNVAKSTILNALVGEDRTIGSPISGTTRDAIDTEFTGPDGQKFQLIDTAGIK 153

Query: 146 QRTKQEKGAAS---LSIMQSRKSLLRAHVVALVLDA 178
           + T       +   LS+ ++ +++ R  VV LV++A
Sbjct: 154 KITTIASAGITTEALSVNRAFRAICRFDVVVLVIEA 189


>Glyma06g11130.1 
          Length = 398

 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 37/57 (64%)

Query: 87  LQLAIVGRPNVGKSTLMNTLLQEDRVLVGPEAGLTRDSIRTQFEFEGRTIYLVDTAG 143
           LQ+AIVGRPNVGKS+L+N   + +R +V   AG TRD I       G  I L+DTAG
Sbjct: 151 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASISVSGIPITLLDTAG 207


>Glyma04g11560.1 
          Length = 587

 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 37/57 (64%)

Query: 87  LQLAIVGRPNVGKSTLMNTLLQEDRVLVGPEAGLTRDSIRTQFEFEGRTIYLVDTAG 143
           LQ+AIVGRPNVGKS+L+N   + +R +V   AG TRD I       G  I L+DTAG
Sbjct: 340 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASISVSGIPITLLDTAG 396