Miyakogusa Predicted Gene

Lj4g3v0037570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0037570.1 Non Chatacterized Hit- tr|I1KNQ6|I1KNQ6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42426
PE,82.68,0,GTPase_EngA: ribosome-associated GTPase EngA,GTP-binding
protein EngA; small_GTP: small GTP-binding ,CUFF.46562.1
         (563 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g40160.1                                                       816   0.0  
Glyma17g00640.1                                                       395   e-109
Glyma12g06150.1                                                       204   2e-52
Glyma11g14170.1                                                       127   3e-29
Glyma11g30440.1                                                        69   1e-11
Glyma06g11130.1                                                        59   1e-08
Glyma04g11560.1                                                        59   1e-08

>Glyma07g40160.1 
          Length = 545

 Score =  816 bits (2107), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/537 (76%), Positives = 447/537 (83%), Gaps = 16/537 (2%)

Query: 33  RGFSSTKNKPLDLDFTQLPISSLPTVIIIGRPNVGKSALFNRLIRRREALVYNTPEDHVT 92
           RGFSS       LDFT++ IS LPTV+I+GRPNVGKSALFNRLIRRREALVYNTP+DHVT
Sbjct: 19  RGFSSLSVVTAPLDFTEIQISRLPTVVILGRPNVGKSALFNRLIRRREALVYNTPDDHVT 78

Query: 93  RDIREGVAKLGNLRFRVLDSAGLXXXXXXXXXILHRTASITANFFAASHVALFLTDARAG 152
           RDIREG+AKL +LRFRVLDSAGL         ILHRTASITA+  A SH ALFLTDARAG
Sbjct: 79  RDIREGLAKLADLRFRVLDSAGLEAEATSAS-ILHRTASITAHVLAKSHFALFLTDARAG 137

Query: 153 LHPLDQEVGKWLRKNAPQLKPIVAMNKSEXXXXXXXXXXXXGNEMCRLGFGDPIAISAET 212
           LHPLD +VGKWLRK+APQ+KPIVAMNKSE             NEMCRLGFGDPIAISAET
Sbjct: 138 LHPLDLQVGKWLRKHAPQIKPIVAMNKSESLFDATGSLASAANEMCRLGFGDPIAISAET 197

Query: 213 GLGMHDLYLSLKPLLEDYMLRVLNVNDEGAQENSNS--EDTSSPEAEESKLPLQLAIVGR 270
           GLGMHDLY+SLKPLLEDYMLRV    +EGA+ENS++  ED+S  + ++SKLPLQLAIVGR
Sbjct: 198 GLGMHDLYMSLKPLLEDYMLRVF--TEEGARENSHNEVEDSSDLDVDKSKLPLQLAIVGR 255

Query: 271 PNVGKSTLMNTLLQEDRVLVGPEAGLTRDSIRTQFEFEGRTIYLVDTAGWLQRTKQEKGA 330
           PNVGKSTL+N LLQEDRVLVGPEAGLTRDSIRTQFEF+GRTIYLVDTAGWLQRTKQEKGA
Sbjct: 256 PNVGKSTLLNALLQEDRVLVGPEAGLTRDSIRTQFEFQGRTIYLVDTAGWLQRTKQEKGA 315

Query: 331 ASLSIMQSRKSLLRAHVVALVLDAEEIINERRSMKHAEVVIARRAVEEGRGLVVIVNKMD 390
           ASLSIMQSRKSLLRAH++ALVLDAEEIIN RRSMKHAEVVIARRAVEEGRGLVVIVNKMD
Sbjct: 316 ASLSIMQSRKSLLRAHIIALVLDAEEIINARRSMKHAEVVIARRAVEEGRGLVVIVNKMD 375

Query: 391 LLRG--KASSFEKVMXXXXXXXXXXXXXXXXXXXXFTSALEGRGRTAVLEQVIDTYEKWC 448
           LLRG  K+SS+EKVM                    F SALEGRGRT VL QVIDTYEKWC
Sbjct: 376 LLRGKHKSSSYEKVMEVVPQEIQTIIPQVTGIPVVFISALEGRGRTTVLNQVIDTYEKWC 435

Query: 449 SRLSTARLNRWMQKVMSRHSWKDQAAQPKIKYFTQVKARPPTFVAFLRGKTQLADTDIRF 508
           SRL TARLNRW       HSWKDQAAQPK+KYFTQVKARPPTFVAF+RGKTQL+DTDIRF
Sbjct: 436 SRLPTARLNRW-------HSWKDQAAQPKVKYFTQVKARPPTFVAFVRGKTQLSDTDIRF 488

Query: 509 LTKSLKEDFDLGGIPIRIMQRAVTKKEV--SGNSKSGHSAGRVAERMMSDKRSVLAE 563
           LTKSLKEDFDLGGIPIRIMQR+VTKK+   SGNSK+ HS  RV ER +SDKRS++ E
Sbjct: 489 LTKSLKEDFDLGGIPIRIMQRSVTKKDASGSGNSKNSHSVCRVVERTVSDKRSIVDE 545


>Glyma17g00640.1 
          Length = 308

 Score =  395 bits (1014), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 219/336 (65%), Positives = 244/336 (72%), Gaps = 40/336 (11%)

Query: 240 EGAQENSNSE--DTSSPEAEESKLPLQLAIVGRPNVGKSTLMNTLLQEDRVLVGPEAGLT 297
           EGA   S+ E  D+   + ++SKLPLQLAI+GRPNVGKSTL+N LLQED VLVGPEAGLT
Sbjct: 1   EGACLYSHHEVEDSCDLDVDKSKLPLQLAILGRPNVGKSTLLNALLQEDHVLVGPEAGLT 60

Query: 298 RDSIRTQFEFEGRTIYLVDTAGWLQRTKQEKGAASLSIMQSRKSLLRAHVVALVLDAEEI 357
           RDSIRTQFEF+GRTIYLVDTAGWLQ        ++  IMQSRKSLL+AH++ALVLDAEEI
Sbjct: 61  RDSIRTQFEFQGRTIYLVDTAGWLQM------QSTPGIMQSRKSLLQAHIIALVLDAEEI 114

Query: 358 INERRSMKHAEVVIARRAVEEGRGLVVIVNKMDLLRGK--ASSFEKVMXXXXXXXXXXXX 415
           IN RRSMKHAEV+IAR AVEEGRGLVVIVNKM+L RGK  +SS+EKVM            
Sbjct: 115 INARRSMKHAEVIIARWAVEEGRGLVVIVNKMNLPRGKHQSSSYEKVMEIVPQEIQTIIP 174

Query: 416 XXXXXXXXFTSALEGRGRTAVLEQVIDTYEKW----CSRLSTARLNRWMQKVMSRHSWKD 471
                   F SALEGRGRT VL QVI+TYEKW     S LS          VMSRHSWK 
Sbjct: 175 QVKGIPVVFISALEGRGRTTVLNQVIETYEKWQLVHPSLLSVT--------VMSRHSWKG 226

Query: 472 QAAQPKIKYFTQVKARPPTFVAFLRGKTQLADTDIRFLTKSLKEDFDLGGIPIRIMQRAV 531
           QAAQPK+KYFTQVKARPPTFVA              FLTKSLKE+FDLGGIPIR+MQR V
Sbjct: 227 QAAQPKVKYFTQVKARPPTFVA--------------FLTKSLKENFDLGGIPIRLMQRFV 272

Query: 532 TKKEVSGN----SKSGHSAGRVAERMMSDKRSVLAE 563
           TKK+ SG+    SK+ HS GRV ER +SDKRSVL E
Sbjct: 273 TKKDASGSETRTSKNSHSVGRVIERTVSDKRSVLVE 308


>Glyma12g06150.1 
          Length = 632

 Score =  204 bits (519), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 164/550 (29%), Positives = 257/550 (46%), Gaps = 81/550 (14%)

Query: 50  LPISSLPTVIIIGRPNVGKSALFNRLIRRREALVYNTPEDHVTRDIREGVAKLGNLRFRV 109
           +P + LP V I+GRPNVGKSALFNRL+    A+V + P   VTRD   G +  G   F V
Sbjct: 124 IPDNLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEP--GVTRDRLYGRSYWGEHEFMV 181

Query: 110 LDSAGLXXXXXXXXXILHRTASITA---------------------------NFFAASHV 142
           +D+ G+         ++   A  T                                 S V
Sbjct: 182 VDTGGVITVSKSQATVMEELAITTTIGMDGIPLAVREAAVARMPSMIERQATAAVEESSV 241

Query: 143 ALFLTDARAGLHPLDQEVGKWLRKNAPQLKPIVAMNKSEXXXXXXXXXXXXGNEMCRLGF 202
            +FL D +AGL   D+E+  WLRKN      I+A+NK E             +E   LGF
Sbjct: 242 IIFLVDGQAGLTAADEEIADWLRKNYSDKYVILAVNKCESPRKRIMQ----ASEFWSLGF 297

Query: 203 GDPIAISAETGLGMHDLYLSLKPLLEDYMLRVLNVNDEGAQENSNSEDTSSPEAEESKLP 262
            +P+ ISA +G G  +L               L++   G Q+   S +      EE  +P
Sbjct: 298 -EPLPISAISGTGTGEL---------------LDLVCSGLQKIEESNNL----VEEDYVP 337

Query: 263 LQLAIVGRPNVGKSTLMNTLLQEDRVLVGPEAGLTRDSIRTQFEF-EGRTIYLVDTAGWL 321
             ++IVGRPNVGKS+++N L+ EDR +V P +G TRD+I T+F   +G+   L+DTAG  
Sbjct: 338 -AISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPDGQKFQLIDTAGIR 396

Query: 322 QRTKQEKGAAS---LSIMQSRKSLLRAHVVALVLDAEEIINERRSMKHAEVVIARRAVEE 378
           +RT      ++   LS+ ++ +++ R+ VVALV++A   I E+      +  IA R  +E
Sbjct: 397 KRTAIASAGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQ------DYKIAERIEKE 450

Query: 379 GRGLVVIVNKMDLLRGK----ASSFEKVMXXXXXXXXXXXXXXXXXXXXFTSALEGRGRT 434
           G+G V++VNK D +  K    AS +E+                      +++A+ G    
Sbjct: 451 GKGCVIVVNKWDTIPNKNQQTASYYEQ-------DVREKLRSLVWAPIVYSTAVAGHSVD 503

Query: 435 AVLEQVIDTYEKWCSRLSTARLNRWMQKVMSRHSWKDQ--AAQPKIKYFTQVKARPPTFV 492
            ++   I+  ++   RL T+ LN+ +Q+ +            + ++ Y TQ   RPPTFV
Sbjct: 504 KIIVAAIEVEKERSRRLGTSILNQVVQEAVGFKPPPRTRGGKRGRVYYCTQAAIRPPTFV 563

Query: 493 AFLRGKTQLADTDIRFLTKSLKEDFDLGGIPIRIMQRAVTKKEVSGNSKSGHSAGRVAER 552
            F+       +T  R++ K L+ D    G PIR++ R+  K         G    +  E 
Sbjct: 564 FFVNDAKLFPETYRRYMEKQLRTDAGFSGTPIRLLWRSRRKM----GKDEGKPVTKTREN 619

Query: 553 MMSDKRSVLA 562
           + S+ R +++
Sbjct: 620 LTSNDRKLVS 629


>Glyma11g14170.1 
          Length = 430

 Score =  127 bits (319), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 198/470 (42%), Gaps = 82/470 (17%)

Query: 81  ALVYNTPEDHVTRDIREGVAKLGNLRFRVLDSAGLXXXXXXXXXILHRTASITA------ 134
           A+V + P   VTRD   G +  G   F V+D+ G+         ++   A  T       
Sbjct: 4   AIVVDEP--GVTRDRLYGRSYWGEHEFMVVDTGGVITVSKSQATVMEELAITTTIGMDGI 61

Query: 135 ---------------------NFFAASHVALFLTDARAGLHPLDQEVGKWLRKNAPQLKP 173
                                     S V +FL D +AGL   D+E+  WLRK       
Sbjct: 62  PLAVREAAVAWMPSMIERQATAAVEESSVIIFLVDGQAGLTAADEEIADWLRKKYSDKYV 121

Query: 174 IVAMNKSEXXXXXXXXXXXXGNEMCRLGFGDPIAISAETGLGMHDLYLSLKPLLEDYMLR 233
           I+A+NK E             +E   LG+   I    +  L +H +    KPL       
Sbjct: 122 ILAVNKCESPRKRIMQ----ASEFWSLGYRTVIC---KLDLVLHLIINVYKPL------- 167

Query: 234 VLNVNDEGAQENSNSEDTSSPEAEESKLPLQLAIVGRPNVGKSTLMNTLLQEDRVLVGPE 293
                       S S+  S+   EE      ++IVGRPNVGKS+++N L+ EDR +V P 
Sbjct: 168 ------------SMSDHKSNNLVEEEDYVPAISIVGRPNVGKSSILNALVGEDRTIVSPI 215

Query: 294 AGLTRDSIRTQFEF-EGRTIYLVDTAGWLQRTKQEKGAASLSIMQSRKSLLRAHVVALVL 352
           +  TRD+I T+F   +G+   L+DTAG  +R+         +I        R+ VVALV+
Sbjct: 216 SCTTRDAIDTEFTGPDGQKFQLIDTAGIRKRSAIASAGTFCAIR-------RSDVVALVI 268

Query: 353 DAEEIINERRSMKHAEVVIARRAVEEGRGLVVIVNKMDLLRGK----ASSFEKVMXXXXX 408
           +A   I E+      E  IA R  +EG+G V++VNK D +  K    AS +E+       
Sbjct: 269 EAMACITEQ------EYNIAERIEKEGKGCVIVVNKWDTIPNKNQQTASYYEQ------- 315

Query: 409 XXXXXXXXXXXXXXXFTSALEGRGRTAVLEQVIDTYEKWCSRLSTARLNRWMQKVMS-RH 467
                          +++ + G     ++    +  ++   RL T+ LN+ +Q+ +  + 
Sbjct: 316 DVREKLRSLDWAPIVYSTVVAGHSVGKIIVAASEVEKERSRRLGTSTLNQVVQEAVGFKP 375

Query: 468 SWKDQAAQ-PKIKYFTQVKARPPTFVAFLRGKTQLADTDIRFLTKSLKED 516
             + +  +  ++ Y TQ   +PPTFV F+       +T  R++ K  + D
Sbjct: 376 PPRTRGGKGGRVYYCTQAAIKPPTFVFFVNDGKLFPETYRRYMEKQHRSD 425


>Glyma11g30440.1 
          Length = 227

 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 84/161 (52%), Gaps = 25/161 (15%)

Query: 198 CRLGFGDPIAISAETGLGMHDLYLSLKPLLEDYMLRVLNVNDEGAQENSNSEDTSSPEAE 257
           C + F  P+ ISA +G G  +L            + ++    +  +E++N          
Sbjct: 50  CHMLF-QPLPISAISGTGTAEL------------IDLVYCRLQKIEESNN--------LV 88

Query: 258 ESKLPLQLAIVGRPNVGKSTLMNTLLQEDRVLVGPEAGLTRDSIRTQFEF-EGRTIYLVD 316
           E    L ++IVGRPNV KST++N L+ EDR +  P +G TRD+I T+F   +G+   L+D
Sbjct: 89  EEDYVLAISIVGRPNVAKSTILNALVGEDRTIGSPISGTTRDAIDTEFTGPDGQKFQLID 148

Query: 317 TAGWLQRTKQEKGAAS---LSIMQSRKSLLRAHVVALVLDA 354
           TAG  + T       +   LS+ ++ +++ R  VV LV++A
Sbjct: 149 TAGIKKITTIASAGITTEALSVNRAFRAICRFDVVVLVIEA 189


>Glyma06g11130.1 
          Length = 398

 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 37/57 (64%)

Query: 263 LQLAIVGRPNVGKSTLMNTLLQEDRVLVGPEAGLTRDSIRTQFEFEGRTIYLVDTAG 319
           LQ+AIVGRPNVGKS+L+N   + +R +V   AG TRD I       G  I L+DTAG
Sbjct: 151 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASISVSGIPITLLDTAG 207


>Glyma04g11560.1 
          Length = 587

 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 37/57 (64%)

Query: 263 LQLAIVGRPNVGKSTLMNTLLQEDRVLVGPEAGLTRDSIRTQFEFEGRTIYLVDTAG 319
           LQ+AIVGRPNVGKS+L+N   + +R +V   AG TRD I       G  I L+DTAG
Sbjct: 340 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASISVSGIPITLLDTAG 396