Miyakogusa Predicted Gene

Lj3g3v3755420.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3755420.1 Non Chatacterized Hit- tr|I1LNN6|I1LNN6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.43804
PE,84.85,0,Elongator protein 3, MiaB family, Radical SA,Elongator
protein 3/MiaB/NifB; TRAM,TRAM domain; MTTASE,CUFF.46340.1
         (601 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g00350.1                                                       998   0.0  
Glyma08g26080.1                                                       637   0.0  
Glyma02g02220.1                                                       204   2e-52
Glyma01g37500.1                                                       134   2e-31
Glyma11g07790.1                                                       112   1e-24
Glyma18g29130.1                                                        90   6e-18

>Glyma12g00350.1 
          Length = 609

 Score =  998 bits (2579), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/614 (81%), Positives = 526/614 (85%), Gaps = 18/614 (2%)

Query: 1   MEDIEDMLIGTTTGHPAGFRLPVAAVGVGVGTKRNQRCSPCSS---AIPGTQTIYMKTFG 57
           MEDIED+LIG+ T  P GFRLP+AA  VGVGTKRNQ  S   S   AIPGTQTI++KTFG
Sbjct: 1   MEDIEDLLIGSAT--PPGFRLPLAA-AVGVGTKRNQLSSSSLSPSPAIPGTQTIFIKTFG 57

Query: 58  CSHNQSDSEYMAGQLSAFGYSLSDNPDEADLWLINTCTVKSPSQSAMDTIIAKGKSSNKP 117
           CSHNQSDSEYMAGQLSAFGYSLSD+PD ADLWLINTCTVKSPSQSAMDTII+KGKSSNKP
Sbjct: 58  CSHNQSDSEYMAGQLSAFGYSLSDDPDHADLWLINTCTVKSPSQSAMDTIISKGKSSNKP 117

Query: 118 LVVSGCVPQGSRDLKELDGISIVGVQQIHRVVEVVEETLKGHEVRLLTRKTLPALDLPKV 177
           LVV+GCVPQGSRDLKEL+GISIVGVQQI RVVE+VEETLKGHEVRLLTRK LPALDLPKV
Sbjct: 118 LVVAGCVPQGSRDLKELEGISIVGVQQIDRVVEIVEETLKGHEVRLLTRKKLPALDLPKV 177

Query: 178 RKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVGRVKSVISDGVKEIWLSSED 237
           RKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVGRVKSVIS+GVKEIWLSSED
Sbjct: 178 RKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVGRVKSVISEGVKEIWLSSED 237

Query: 238 TGAYGRDIGXXXXXXXXXXXXXXXXXXSTMLRIGMTNPPFILEHLKEIAEILRHPCVYSF 297
           TGAYGRDIG                  STMLRIGMTNPP+ILEHLKEIAEILRHPCVYSF
Sbjct: 238 TGAYGRDIGVNLPTLLNALVAELPADASTMLRIGMTNPPYILEHLKEIAEILRHPCVYSF 297

Query: 298 LHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQIATDIICGFPGETDEDFSQT 357
           LHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVP MQIATDIICGFPGETDEDF QT
Sbjct: 298 LHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPEMQIATDIICGFPGETDEDFLQT 357

Query: 358 VNLIKEYKFSQVHISQFYPRPGTPAARMKKVPSNVVKRRSRELTNVFEAFTPYSGMEGKV 417
           +NLIKEYK  QVHISQFYPRPGTPAARMKKVPSNVVKRRSRELTNVFE+FTPYSGMEGKV
Sbjct: 358 INLIKEYKLPQVHISQFYPRPGTPAARMKKVPSNVVKRRSRELTNVFESFTPYSGMEGKV 417

Query: 418 ERIWITDVASDGVHLVGHTKGYIQVLVIAPDYMLGTSAMVKITSVGRWSVFGEVIEMVNH 477
           ERIWITD+ASDGVHLVGHTKGYIQVLV+APD MLGTSAMVKITSVGRWSVFG+VIE VN 
Sbjct: 418 ERIWITDIASDGVHLVGHTKGYIQVLVLAPDNMLGTSAMVKITSVGRWSVFGDVIETVNP 477

Query: 478 VSDDKVVNKQDPNQDM----------QEPESCACGNDIDSCCGQSNLDKNDQSRGPAEPQ 527
           VSD+K +NK  PNQD           +EPE CACGNDI  CCGQ  L+ ND SRG A PQ
Sbjct: 478 VSDNKALNKLVPNQDCGNSAKTGGFSEEPEYCACGNDI--CCGQGTLENNDNSRGSAVPQ 535

Query: 528 SQNSRNFIGWILRKRKHLHKGVESELASGSVQNQEGSMKKLDFVDKALLXXXXXXXXXXX 587
           +Q+ RNFIGW+LRKR+HLHK VESELASGSV+ QEG M+K DFVDK LL           
Sbjct: 536 NQSKRNFIGWMLRKREHLHKTVESELASGSVKKQEGIMRKWDFVDKVLLGGISISILTIM 595

Query: 588 XXXXXLTFRVIWSQ 601
                + FRVIWSQ
Sbjct: 596 ALVVAVMFRVIWSQ 609


>Glyma08g26080.1 
          Length = 436

 Score =  637 bits (1643), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/507 (67%), Positives = 361/507 (71%), Gaps = 80/507 (15%)

Query: 104 MDTIIAKGKSSNKPLVVSGCVPQGSRDLKELDGISIVGVQQIHRVVEVVEETLKGHEVRL 163
           MDTII KGKSSNKPLVV+GCVPQGSRDLKEL GISIVGVQQIHRVVE+VEETLKGHEVRL
Sbjct: 1   MDTIITKGKSSNKPLVVAGCVPQGSRDLKELQGISIVGVQQIHRVVEIVEETLKGHEVRL 60

Query: 164 LTRKTLPALDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVGRVKSV 223
           LTRK LP LDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLV R    
Sbjct: 61  LTRKKLPTLDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVRR---- 116

Query: 224 ISDGVKEIWLSSEDTGAYGRDIGXXXXXXXXXXXXXXXXXXSTMLRIGMTNPPFILEHLK 283
                  IWLSSEDTGA GRDIG                  STML               
Sbjct: 117 -------IWLSSEDTGASGRDIGVNPPTLLNALVAELPADASTML--------------- 154

Query: 284 EIAEILRHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQIATDII 343
              +ILRHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVP MQIATDII
Sbjct: 155 ---QILRHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPEMQIATDII 211

Query: 344 CGFPGETDEDFSQTVNLIKEYKFSQVHISQFYPRPGTPAARMKKVPSNVVKRRSRELTNV 403
           C FPGETDEDF QTVNLI+EYKF QVHISQFYPRPGTPAARMKKVPSNVVKRRSRELT  
Sbjct: 212 CRFPGETDEDFVQTVNLIEEYKFPQVHISQFYPRPGTPAARMKKVPSNVVKRRSRELT-- 269

Query: 404 FEAFTPYSGMEGKVERIWITDVASDGVHLVGHTKGYIQVLVIAPDYMLGTSAMVKITSVG 463
                       KVERIWITD+ASDGVHLVGHTKGYIQVLV+APD MLGTSA+VKITSVG
Sbjct: 270 -----------CKVERIWITDIASDGVHLVGHTKGYIQVLVLAPDNMLGTSAVVKITSVG 318

Query: 464 RWSVFGEVIEMVNHVSDDKVVNKQDPNQDM--------QEPESCACGNDIDSCCGQS-NL 514
           RWSVFGE+ E +NH SD+K +NK  PNQD+        +E ESCACGNDI  CCGQ   L
Sbjct: 319 RWSVFGEIFETINHASDNKALNKLVPNQDLSSLCGGFSEEQESCACGNDI--CCGQEGTL 376

Query: 515 DKNDQSRGPAEPQSQNSRNFIGWILRKRKHLHKGVESELASGSVQNQEGSMKKLDFVDKA 574
           +K+D SRG +           G I  KR                  QEGSM+K D VDK 
Sbjct: 377 EKSDNSRGRS-----------GGICTKR----------------LRQEGSMRKWDLVDKV 409

Query: 575 LLXXXXXXXXXXXXXXXXLTFRVIWSQ 601
           LL                + FRVIWSQ
Sbjct: 410 LLGGISISILTIMALVVAVMFRVIWSQ 436


>Glyma02g02220.1 
          Length = 362

 Score =  204 bits (519), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 99/128 (77%), Positives = 114/128 (89%)

Query: 104 MDTIIAKGKSSNKPLVVSGCVPQGSRDLKELDGISIVGVQQIHRVVEVVEETLKGHEVRL 163
           MD II+KGKSSNKPLVV GC PQGSRDLK+L+ ISI+GVQQI+RV E+VE+TLKGHEVRL
Sbjct: 1   MDAIISKGKSSNKPLVVVGCFPQGSRDLKDLERISIIGVQQINRVFEIVEKTLKGHEVRL 60

Query: 164 LTRKTLPALDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVGRVKSV 223
           LT + L  L+L KVRKN+FVEILPINVGCLGACTYCKTKH RGHL SYTIDSL+G VKS+
Sbjct: 61  LTCQKLATLELQKVRKNEFVEILPINVGCLGACTYCKTKHVRGHLRSYTIDSLIGCVKSM 120

Query: 224 ISDGVKEI 231
           IS+GV+ +
Sbjct: 121 ISEGVRAL 128


>Glyma01g37500.1 
          Length = 551

 Score =  134 bits (338), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 125/511 (24%), Positives = 223/511 (43%), Gaps = 68/511 (13%)

Query: 43  SAIPGTQTIYMKTFGCSHNQSDSEYMAGQLSAFGY-SLSDNPDEADLWLINTCTVKSPSQ 101
           + +P T  IY +T+GC  N +D E +   +   GY  +   P+ A++  INTC ++  ++
Sbjct: 37  TEVPPTGRIYHETYGCQMNVNDMEIVLSIMKNAGYGEIVSVPESAEIIFINTCAIRDNAE 96

Query: 102 SAM--------------DTIIAKGKS-SNKP--LVVSGCVPQGSRDLKELDGISIVGV-- 142
             +               + +A G+S S +P  +VV GC+ +  ++ K LD   +V V  
Sbjct: 97  QKVWQRLNYFWFLKRHWKSNVATGRSQSMRPPKVVVLGCMAERLKE-KILDSDKMVDVVC 155

Query: 143 -----QQIHRVVEVVEETLKGHEVRLLTRKTLPALDLPKVRKNKFVEILPINVGCLGACT 197
                + + R++E V+   +G    L   +T   ++  ++ KN     + +  GC   C+
Sbjct: 156 GPDAYRDLPRLLEEVDYGQRGINTLLSLEETYADINPVRISKNSVTAFVSVMRGCNNMCS 215

Query: 198 YCKTKHARGHLGSYTIDSLVGRVKSVISDGVKEIWLSSEDTGAY------------GRDI 245
           +C     RG   S  ++S+V  V  +  +GVKE+ L  ++  +Y            G + 
Sbjct: 216 FCIVPFTRGRERSRPVESIVREVAELWKEGVKEVMLLGQNVNSYNDASGIEREVESGSNW 275

Query: 246 GXXXXXXXXXXXXXXXXXXSTML-RIGMTNPP----FILEHLKEIAEIL------RHPCV 294
                              S +L R+    P     F   H K+  + L      RH  +
Sbjct: 276 KLSEGFSSMAKVKNMGLRFSDLLDRLSSEFPEMRFRFTSPHPKDFPDDLLYLMRERHN-I 334

Query: 295 YSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPGMQIATDIICGFPGETDEDF 354
              +H+P Q+GS T+L  M R YT   +  +V  +  ++P + +++D ICGF GET+E+ 
Sbjct: 335 CKLIHLPAQTGSSTVLERMRRGYTREAYLDLVQKIRSIIPDVALSSDFICGFCGETEEEH 394

Query: 355 SQTVNLIKEYKFSQVHISQFYPRPGTPAAR--MKKVPSNVVKRRSRELTNVFEAFTP--Y 410
           S+T+ LIK   +    +  +  R  T A R  +  VP  + +RR  EL   F   T   +
Sbjct: 395 SETLTLIKAVGYDMAFLFAYSMREKTHAHRNYVDDVPEEIKQRRLAELIETFRESTGQCF 454

Query: 411 SGMEGKVERIWIT--DVASDGVHLVGHT-KGYIQVLVIAP-----------DYMLGTSAM 456
               G  + + +   +  +    L+G + KG+  + V  P           + ++G    
Sbjct: 455 DSQIGTTQLVLVEGPNKRAPDTELMGKSDKGHRVLFVNMPIPDREDINTKRNPVVGDYVE 514

Query: 457 VKITSVGRWSVFGEVIEMVNHVSDDKVVNKQ 487
           V IT   R S+FGE + +    S D  ++K+
Sbjct: 515 VHITRSTRASLFGEALAITKLTSFDNNLDKE 545


>Glyma11g07790.1 
          Length = 498

 Score =  112 bits (279), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 111/485 (22%), Positives = 203/485 (41%), Gaps = 68/485 (14%)

Query: 61  NQSDSEYMAGQLSAFGY-SLSDNPDEADLWLINTCTVKSPSQSAM--------------D 105
           N +D E +   +   GY  +   P+ A++  INTC ++  ++  +               
Sbjct: 2   NVNDMEIVLSIMKNAGYGEIVSVPESAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRHWK 61

Query: 106 TIIAKGKSSN---KPLVVSGCVPQGSRDLKELDGISIVGV-------QQIHRVVEVVEET 155
             +A G+S +     +VV GC+ +  ++ K LD   +V V       + + R++E V+  
Sbjct: 62  NNVATGRSQSLHPPKVVVLGCMAERLKE-KILDSDKMVDVVCGPDAYRDLPRLLEEVDYG 120

Query: 156 LKGHEVRLLTRKTLPALDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDS 215
            KG    L   +T   ++  ++ KN     + +  GC   C++C     RG   S  ++S
Sbjct: 121 QKGINTLLSLEETYADINPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVES 180

Query: 216 LVGRVKSVISDGVKEIWLSSEDTGAYGRDIGXXXXXXXXXXXXXXXXXXSTMLRIGMTNP 275
           +V  V  +  +GVKE+ L  ++  +Y  D                    S+M ++     
Sbjct: 181 IVREVAELWKEGVKEVTLLGQNVNSYN-DASEIERKVESGSNWKLSEGFSSMAKVKNMGL 239

Query: 276 PF--ILEHLKEIAEILR------HP---------------CVYSFLHVPVQSGSDTILSA 312
            F  +L+ L      +R      HP                +   +H+P Q+GS  +L  
Sbjct: 240 RFSDLLDRLSSEFPEMRFRFTSPHPKDFPDELLYLMRERHNICKLIHLPAQTGSSPVLER 299

Query: 313 MNREYTVSEFRTVVDTLTELVPGMQIATDIICGFPGETDEDFSQTVNLIKEYKFSQVHIS 372
           M R YT   +  +V  +  ++P + +++D ICGF GET+E+ S+T+ L+K   +    + 
Sbjct: 300 MRRGYTREAYLDLVQKIRSIIPDVALSSDFICGFCGETEEEHSETLTLVKAVGYDMAFMF 359

Query: 373 QFYPRPGTPAAR--MKKVPSNVVKRRSRELTNVFEAFTP--YSGMEGKVERIWIT--DVA 426
            +  R  T A R  +  VP  + +RR  EL   F   T   +    G  + + +   +  
Sbjct: 360 AYSMREKTHAHRNYVDDVPEEIKQRRLAELIETFRGSTGQCFDSQIGTTQLVLVEGPNKR 419

Query: 427 SDGVHLVGHT-KGYIQVLVIAP-----------DYMLGTSAMVKITSVGRWSVFGEVIEM 474
           +    L+G + KG+  + V  P           + ++G    V+IT   R S+FGE + +
Sbjct: 420 APDTELMGKSDKGHRVLFVNMPIPDREDINTKRNPVVGDYVEVRITRSTRASLFGEALAI 479

Query: 475 VNHVS 479
               S
Sbjct: 480 TKLTS 484


>Glyma18g29130.1 
          Length = 130

 Score = 90.1 bits (222), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 44/63 (69%), Positives = 48/63 (76%), Gaps = 5/63 (7%)

Query: 317 YTVSEFRTVVDTLTELVPGMQIATDIICGFPGETDEDFSQTVNLIKEYKFSQVHISQFYP 376
           YT+SE  TVVDTL E VP MQIATDIICGFP     +F +T+ L KEYKF QVHISQFYP
Sbjct: 1   YTMSESMTVVDTLIEHVPEMQIATDIICGFP-----NFVKTIILNKEYKFPQVHISQFYP 55

Query: 377 RPG 379
           RP 
Sbjct: 56  RPA 58