Miyakogusa Predicted Gene

Lj3g3v3752020.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3752020.1 Non Chatacterized Hit- tr|B9F278|B9F278_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,71.7,0.000000000000001,seg,NULL,CUFF.46288.1
         (166 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g36710.1                                                       155   2e-38
Glyma12g00650.1                                                        80   8e-16

>Glyma09g36710.1 
          Length = 173

 Score =  155 bits (392), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 84/149 (56%), Positives = 99/149 (66%), Gaps = 15/149 (10%)

Query: 31  HLLIRSEKAS--DSAPQKPGVGFGQTKQXXX-----------XXXXXXXXXSPVEKPALF 77
            + I+SEKAS  DS P K GVGFG +                         SP+EKPA  
Sbjct: 27  RINIKSEKASSDDSGPSKTGVGFGSSDTAAVPVSSKKKKKAQRERASIIRRSPLEKPAFV 86

Query: 78  DSSEQKQQQTVEQSKTETAFLLAWLGFGAVILVEGIALAASGFLPEEWDKIFVKYVYPSF 137
             SEQ+  +  E++K E+AFLLAWLGFG VILVEGIALAASGFLPE+WD+ FVK++YPSF
Sbjct: 87  --SEQQVGKAKEENKNESAFLLAWLGFGVVILVEGIALAASGFLPEQWDQFFVKFLYPSF 144

Query: 138 TPTVLFFFAGAVVYGVLKYLQNDNITQQK 166
           TPTV  F AGAV YGV KYLQN+ IT+QK
Sbjct: 145 TPTVFLFVAGAVAYGVFKYLQNEKITEQK 173


>Glyma12g00650.1 
          Length = 109

 Score = 80.5 bits (197), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 34/50 (68%), Positives = 41/50 (82%)

Query: 117 ASGFLPEEWDKIFVKYVYPSFTPTVLFFFAGAVVYGVLKYLQNDNITQQK 166
           A+ FLPE+WD+ FVK++YPSFTPTV  F  GAV YGV KYLQN+ IT+QK
Sbjct: 60  ATCFLPEQWDQFFVKFLYPSFTPTVFLFVGGAVAYGVFKYLQNEKITEQK 109