Miyakogusa Predicted Gene

Lj3g3v3689900.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3689900.1 tr|G7IKW7|G7IKW7_MEDTR SNW domain-containing
protein OS=Medicago truncatula GN=MTR_2g030450 PE=4
SV=,86.46,0,seg,NULL; coiled-coil,NULL; SKIP_SNW,SKI-interacting
protein SKIP, SNW domain; NUCLEAR PROTEIN SKIP-,CUFF.46200.1
         (603 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g01190.1                                                       810   0.0  
Glyma16g08450.1                                                       703   0.0  
Glyma18g13100.1                                                        86   2e-16

>Glyma01g01190.1 
          Length = 542

 Score =  810 bits (2091), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/546 (76%), Positives = 441/546 (80%), Gaps = 5/546 (0%)

Query: 59  PRRVEDFGDGGAFPEIHVAQYPLDMGRDKS-SKPGSKILPVTVDAHGNVAYDAIVKQNEN 117
           PR++EDFGDGGAFPEIHVAQYPLDMGR+KS +KPGSKILPVTVDA+GNVAYDAIV+QNEN
Sbjct: 1   PRKIEDFGDGGAFPEIHVAQYPLDMGREKSGAKPGSKILPVTVDANGNVAYDAIVRQNEN 60

Query: 118 AKKIVYTQQKDLIPKILKNXXXXXXXXXXXXVQKEIDETMQETKAALEKIVNVRLSAAQP 177
           A+KIVYTQQKDLIPK LKN             QK+I+ETMQETKAALEKIVNVRLSAAQP
Sbjct: 61  ARKIVYTQQKDLIPKFLKNDEDDDDVVSDDEAQKQIEETMQETKAALEKIVNVRLSAAQP 120

Query: 178 KNVPKQSSDAKYIKYKPSQQSAAFNSGAKERVIRMMEMPVDPLEPPKFKHKRVPKAXXXX 237
           KNVPKQ+SDAKYIKYKPSQQS AFNSGAKERVIRM+EMPVDPLEPPKFKHKRVPKA    
Sbjct: 121 KNVPKQNSDAKYIKYKPSQQSDAFNSGAKERVIRMVEMPVDPLEPPKFKHKRVPKASGSP 180

Query: 238 XXXXXXXXXXXXTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFA 297
                       TVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFA
Sbjct: 181 PVPVMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFA 240

Query: 298 KLSESLYVAEQKAREAVAMRSKVXXXXXXXXXXXXXXXXXXXAQKARSERTGVAPPAAVS 357
           KLSE+LYVAEQKAREAVAMRSKV                   AQKARSER G      V 
Sbjct: 241 KLSEALYVAEQKAREAVAMRSKVQKEMMLKEKERKEQELRALAQKARSERIGGERIGVVP 300

Query: 358 FPPEKSSVDDADMRVDYDHPRDREKNFPKESREEREDXXXXXXXXXXXXXXXXXXXXXXA 417
             P   +VD+ DMRVDY+H    EK  P+E   ER                        A
Sbjct: 301 AAPPAVAVDEDDMRVDYEH----EKENPRERDRERSFRMQREKIREERRKERERERRLEA 356

Query: 418 KDAAMGKKSKITRDRDRDISEKVALGMATAKTGTEVMYDERLFNQDKGMSSGFGTDDQYN 477
           KDAAMGK+SKITRDRDRDISEKVALGMA+ K GTEVMYDERLFNQDKG++SGF TDDQYN
Sbjct: 357 KDAAMGKRSKITRDRDRDISEKVALGMASTKPGTEVMYDERLFNQDKGIASGFATDDQYN 416

Query: 478 VYDKGLFTAQPTLSTLYRPKKDVDNETYGGADEQLEKIMKTDRFKPDKAFSGASERAGPR 537
           VY+ GLFTAQPTLSTLYRPKK++D+ETYGGADEQLEKIMKTDRFKPDK F+GASERAGPR
Sbjct: 417 VYEHGLFTAQPTLSTLYRPKKNLDDETYGGADEQLEKIMKTDRFKPDKGFAGASERAGPR 476

Query: 538 DRPVEFENEEADPFGLDQFLTEVKKGKKAMEKVGGGGTMKASAGSSMRDGYEGGSSRTRI 597
           DRPVEFENEEADPFGLDQFLTEVKKGKKAMEKVGGGGTM+ASAGSSMRDG EGGS RTRI
Sbjct: 477 DRPVEFENEEADPFGLDQFLTEVKKGKKAMEKVGGGGTMRASAGSSMRDGNEGGSGRTRI 536

Query: 598 GFERGH 603
           GFERGH
Sbjct: 537 GFERGH 542


>Glyma16g08450.1 
          Length = 512

 Score =  703 bits (1814), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/501 (73%), Positives = 390/501 (77%), Gaps = 27/501 (5%)

Query: 114 QNENAKKIVYTQQKDLIPKILKNXXXXXXXXXXXXVQKEIDETMQETKAALEKIVNVRLS 173
           QNENA+KIVYTQQKDLIPK LKN             QK+I+ETMQETKAALEKIVNVRLS
Sbjct: 28  QNENARKIVYTQQKDLIPKCLKNDEEDDDVSDDE-TQKQIEETMQETKAALEKIVNVRLS 86

Query: 174 AAQPKNVPKQSSDAKYIKYKPSQQSAAFNSGAKERVIRMMEMPVDPLEPPKFKHKRVPKA 233
           AAQPKNVPKQ++DAKYIKYKPSQQSAAFNSGAKERVIRM+EM VDPLEPPKFKHKRVPKA
Sbjct: 87  AAQPKNVPKQNTDAKYIKYKPSQQSAAFNSGAKERVIRMVEMAVDPLEPPKFKHKRVPKA 146

Query: 234 XXXXXXXXXXXXXXXXTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQIN 293
                           TVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQIN
Sbjct: 147 SGSPPVPVMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQIN 206

Query: 294 DNFAKLSESLYVAEQKAREAVAMRSKVXXXXXXXXXXXXXXXXXXXAQKARSERTG---- 349
           DNFAKLSE+LYVAEQKAREAVAMRSKV                   AQKARSER G    
Sbjct: 207 DNFAKLSEALYVAEQKAREAVAMRSKVQKEMMLKEKERKEQELRALAQKARSERIGGERI 266

Query: 350 -VAPPAAVSFPPEKSSVDDADMRVDYDHPRDR------EKNFPKESREEREDXXXXXXXX 402
            V P A    PP           +DYDH ++       E++F KESR+ERE+        
Sbjct: 267 GVVPAA----PP-----------IDYDHEKENPRERERERSFVKESRDEREERMQREKIR 311

Query: 403 XXXXXXXXXXXXXXAKDAAMGKKSKITRDRDRDISEKVALGMATAKTGTEVMYDERLFNQ 462
                         AKDAAMGK+SKITRDRDRDISEKVALGMA+ K GTEVMYDERLFNQ
Sbjct: 312 EERRKERERERRLEAKDAAMGKRSKITRDRDRDISEKVALGMASTKPGTEVMYDERLFNQ 371

Query: 463 DKGMSSGFGTDDQYNVYDKGLFTAQPTLSTLYRPKKDVDNETYGGADEQLEKIMKTDRFK 522
           DKG++SGF TDDQYNVY+ GLFTAQPTLSTLYRPKK++D+ETYGGADEQLEKIMKTDRFK
Sbjct: 372 DKGIASGFATDDQYNVYEHGLFTAQPTLSTLYRPKKNIDDETYGGADEQLEKIMKTDRFK 431

Query: 523 PDKAFSGASERAGPRDRPVEFENEEADPFGLDQFLTEVKKGKKAMEKVGGGGTMKASAGS 582
           PDK FSGASERAGPRDRPVEFENEEADPFGLDQFLTEVKKGKKAMEKVGGGGTM+ASAGS
Sbjct: 432 PDKGFSGASERAGPRDRPVEFENEEADPFGLDQFLTEVKKGKKAMEKVGGGGTMRASAGS 491

Query: 583 SMRDGYEGGSSRTRIGFERGH 603
           SMRDG EGGS RTRIGFERGH
Sbjct: 492 SMRDGNEGGSGRTRIGFERGH 512


>Glyma18g13100.1 
          Length = 139

 Score = 85.5 bits (210), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 63/141 (44%), Gaps = 55/141 (39%)

Query: 149 VQKEIDETMQETKAALEKIVNVRLSAAQPKNVPKQSSDAKYIKYKPSQQSAAFNSGAKER 208
           +Q +I E MQETK  LE+   V                          Q+ A   G    
Sbjct: 40  MQNQIKEMMQETKPTLERASKV--------------------------QAQACYEGVGVY 73

Query: 209 VIRMMEMPVDPLEPPKFKHKRVPKAXXXXXXXXXXXXXXXXTVKDQQDWKIPPCISNWKN 268
            + MM +P+ P+                             TVKDQ+DWKIPPCISNWKN
Sbjct: 74  AMPMMHLPMQPV-----------------------------TVKDQKDWKIPPCISNWKN 104

Query: 269 PKGYTIPLDKRLAADGRGLQE 289
            KGY IP +KRLAADGRGL+E
Sbjct: 105 LKGYNIPHNKRLAADGRGLRE 125