Miyakogusa Predicted Gene

Lj3g3v3640210.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3640210.1 Non Chatacterized Hit- tr|I1LP14|I1LP14_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.17943
PE,48.48,0.000002,seg,NULL,CUFF.46137.1
         (125 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g01520.1                                                        56   8e-09
Glyma09g35830.1                                                        50   5e-07

>Glyma12g01520.1 
          Length = 68

 Score = 56.2 bits (134), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 5/66 (7%)

Query: 55  IGDVFYGDDDYEEIHEHEKMYYKEDHVMESMRKASQIKAINKKKKQRNNDYCWSFFP-CF 113
           +GDVFYG+DD+ E+++     YKED VMES+R   +IK +  K++Q NN+ C+ +F  CF
Sbjct: 1   MGDVFYGNDDHREMND--DCMYKEDVVMESIRSQREIKDL--KRRQNNNNCCYFYFLRCF 56

Query: 114 RFLKLL 119
            FL LL
Sbjct: 57  HFLTLL 62


>Glyma09g35830.1 
          Length = 69

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 10/69 (14%)

Query: 55  IGDVFYGDDDYEEIHEHEKMYYKEDHVMESMRKASQIKAINKKKKQRNNDYC---WSFFP 111
           +GD+FYG+DD+ E+++     YKED V+ESMRK  +IK +  K++Q NN+YC     F  
Sbjct: 1   MGDIFYGNDDHREMND---CMYKED-VIESMRKQREIKEL--KRRQNNNNYCCCYLYFLR 54

Query: 112 CF-RFLKLL 119
           CF  FL LL
Sbjct: 55  CFDDFLTLL 63