Miyakogusa Predicted Gene

Lj3g3v3640180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3640180.1 Non Chatacterized Hit- tr|K4BV79|K4BV79_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,40.3,6e-19,PEROXISOMAL BIOGENESIS FACTOR 11,Peroxisomal
biogenesis factor 11; seg,NULL; PEX11,Peroxisomal bioge,CUFF.46131.1
         (232 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g01540.1                                                       376   e-105
Glyma09g35810.1                                                       371   e-103
Glyma14g08300.1                                                       123   1e-28
Glyma17g36750.1                                                       122   3e-28
Glyma09g40060.2                                                        49   4e-06
Glyma09g40060.1                                                        49   4e-06
Glyma18g46140.3                                                        49   6e-06
Glyma18g46140.2                                                        49   6e-06
Glyma18g46140.1                                                        49   6e-06

>Glyma12g01540.1 
          Length = 251

 Score =  376 bits (966), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 187/232 (80%), Positives = 199/232 (85%), Gaps = 4/232 (1%)

Query: 1   MTDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVNWHVEATNPDMSKRFKQWEVASGLSRKA 60
           M D+VDKLVIFLAKRDGIDKLVKTFQYVSKLVNWHVEAT+PD SKRFKQWEVASGLSRKA
Sbjct: 24  MNDSVDKLVIFLAKRDGIDKLVKTFQYVSKLVNWHVEATHPDTSKRFKQWEVASGLSRKA 83

Query: 61  FRTGRFLTGFNALRRNPGSNNTLRLLAVLSNAGEMVYFFFDHFLWLSRIGTIDANLAKKM 120
           FRTGRFLTGFN LRRNPGS  +LRLLAVLSNAGEMVYFFFDHFLWL+RIGTIDA+LAKKM
Sbjct: 84  FRTGRFLTGFNVLRRNPGSTLSLRLLAVLSNAGEMVYFFFDHFLWLARIGTIDASLAKKM 143

Query: 121 SYISAFGEAVGYVFFIIADFILLQEGLKAXXXXXXXXXXXXXXXXXXXXXXXRIQKIRGD 180
           S+ISAFGE+VGYVFFIIADFI+L+EGLKA                        I KIR D
Sbjct: 144 SFISAFGESVGYVFFIIADFIMLKEGLKAERKLRRSSSKEKSEEEEKAV----ILKIRSD 199

Query: 181 RIMRLMAVAANVADLIIALAEIEPNPFCCHTVSLGISGLVSAWAGWYRNWPS 232
           RIMRLMAVAAN+ADL IA+AEIEPNPFC HTV+LGISGLVSAWAGWYRNWPS
Sbjct: 200 RIMRLMAVAANLADLFIAIAEIEPNPFCNHTVTLGISGLVSAWAGWYRNWPS 251


>Glyma09g35810.1 
          Length = 223

 Score =  371 bits (953), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 182/232 (78%), Positives = 198/232 (85%), Gaps = 9/232 (3%)

Query: 1   MTDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVNWHVEATNPDMSKRFKQWEVASGLSRKA 60
           M D+VDKLVIFLAKRDGIDK+VKTFQYVSKLVNWHVE T  D+S+RFKQWEVASGLSRKA
Sbjct: 1   MNDSVDKLVIFLAKRDGIDKVVKTFQYVSKLVNWHVEGTQADISRRFKQWEVASGLSRKA 60

Query: 61  FRTGRFLTGFNALRRNPGSNNTLRLLAVLSNAGEMVYFFFDHFLWLSRIGTIDANLAKKM 120
           FRTGRFL+GFN LRRNPGS  +LRLLAVL+NAGEMVYFFFDHFLWL+RIGTIDA+LAKKM
Sbjct: 61  FRTGRFLSGFNVLRRNPGSTLSLRLLAVLANAGEMVYFFFDHFLWLARIGTIDASLAKKM 120

Query: 121 SYISAFGEAVGYVFFIIADFILLQEGLKAXXXXXXXXXXXXXXXXXXXXXXXRIQKIRGD 180
           S+ISAFGE+VGYVFFIIADFI+L+EG+KA                        IQKIR D
Sbjct: 121 SFISAFGESVGYVFFIIADFIMLKEGIKAQRELSSSKEEEIKIG---------IQKIRSD 171

Query: 181 RIMRLMAVAANVADLIIALAEIEPNPFCCHTVSLGISGLVSAWAGWYRNWPS 232
           RIMRLMAVAANVADL IA+AEIEPNPFC HTV+LGISGLVSAWAGWYRNWPS
Sbjct: 172 RIMRLMAVAANVADLFIAIAEIEPNPFCNHTVTLGISGLVSAWAGWYRNWPS 223


>Glyma14g08300.1 
          Length = 259

 Score =  123 bits (309), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 126/234 (53%), Gaps = 6/234 (2%)

Query: 3   DTVDKLVIFLAKRDGIDKLVKTFQYVSKLV-NWHVEATNPDMSKRFKQWEVASGLSRKAF 61
           D +  +  +LAKRDG+DKL+K  +Y +KL+    +  +NP +S R K +E + G+SRKAF
Sbjct: 27  DLLSHVEAYLAKRDGVDKLLKISRYATKLILASSLLQSNPTLSHRLKSFESSVGVSRKAF 86

Query: 62  RTGRFLTGFNALR-RNPGSNNTLRLLAVLSNAGEMVYFFFDHFLWLSRIGTIDANLAKKM 120
           R G+F+   NAL+  +P S   L  L++L+  GE  Y+F + F+WL++ G ID   A+  
Sbjct: 87  RLGKFVQDLNALKTTHPHSKRQL-FLSLLAYGGEGFYYFVEQFVWLAKSGLIDPKHARFF 145

Query: 121 SYISAFGEAVGYVFFIIADFILLQEGLKAXXXXXXXXXXXXXXXXXXXXXXXRIQKIRGD 180
             +SA+ E VGY   +      LQE  K                        R+ K+R  
Sbjct: 146 QKLSAWAEFVGYFGSVALKLGDLQEIAKEEACVESSVEITRLRGSGCVDEEVRLGKLREK 205

Query: 181 RIMRLMAVAANVADLIIALAEI--EPNPFCCHTVSLGISGLVSAWAGWYRNWPS 232
           ++M+ ++V  ++AD ++AL +I     PF    V + ++GL+SA    ++NW S
Sbjct: 206 KMMKRLSVVQDLADAVMALDDILDGKGPF-SKPVLMALAGLLSALISSHKNWIS 258


>Glyma17g36750.1 
          Length = 262

 Score =  122 bits (306), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 125/233 (53%), Gaps = 3/233 (1%)

Query: 3   DTVDKLVIFLAKRDGIDKLVKTFQYVSKLV--NWHVEATNPDMSKRFKQWEVASGLSRKA 60
           D ++ +  +LAKRDG+DKL+K  +Y +KL+     +++ NP +S R K +E + G+SRKA
Sbjct: 29  DLLNHVEAYLAKRDGVDKLLKISRYTAKLILATSLLQSNNPTLSHRLKSFESSVGVSRKA 88

Query: 61  FRTGRFLTGFNALRRNPGSNNTLRLLAVLSNAGEMVYFFFDHFLWLSRIGTIDANLAKKM 120
           FR G+F+   NAL+     +N    L+VL+  GE +Y+F + F+WL++ G IDA  ++K 
Sbjct: 89  FRLGKFVQDLNALKTTHPHSNLDLFLSVLAYGGEGLYYFVEQFVWLAKSGLIDAKHSRKF 148

Query: 121 SYISAFGEAVGYVFFIIADFILLQEGLKAXXXXXXXXXXXXXXXXXXXXXXXRIQKIRGD 180
             +SA+ E VGY   +      L    +                        ++ K+R  
Sbjct: 149 QKLSAWAEFVGYFGSVALKLGDLGAIAQEEACLKSSVEITRLREGGCVDEEAQLGKLRDK 208

Query: 181 RIMRLMAVAANVADLIIALAEI-EPNPFCCHTVSLGISGLVSAWAGWYRNWPS 232
           + M+ ++V  ++AD ++AL ++ + N      V +  +GL+SA    ++NW S
Sbjct: 209 KTMKRLSVVQDLADAVMALDDVLDGNGPFSKPVLMASAGLLSALISTHKNWVS 261


>Glyma09g40060.2 
          Length = 235

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 9/105 (8%)

Query: 8   LVIFLAKRDGIDKLVKTFQYVSKLVNWHVEATNPDMSKRFKQWEVASGLSRKAFRTGRFL 67
           LV++L K +  DK+ +  QY SK ++     T  ++ K        + L+RK FR  +F+
Sbjct: 14  LVLYLGKAEARDKICRAIQYGSKFLSNGEPGTAQNVDK-------TTSLARKVFRLFKFV 66

Query: 68  TGFNAL-RRNP-GSNNTLRLLAVLSNAGEMVYFFFDHFLWLSRIG 110
              +AL    P G+   L LL    NA    + F D F+WL R G
Sbjct: 67  NDLHALISPTPQGTPLPLALLGKSKNALLSTFLFLDQFVWLGRTG 111


>Glyma09g40060.1 
          Length = 235

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 9/105 (8%)

Query: 8   LVIFLAKRDGIDKLVKTFQYVSKLVNWHVEATNPDMSKRFKQWEVASGLSRKAFRTGRFL 67
           LV++L K +  DK+ +  QY SK ++     T  ++ K        + L+RK FR  +F+
Sbjct: 14  LVLYLGKAEARDKICRAIQYGSKFLSNGEPGTAQNVDK-------TTSLARKVFRLFKFV 66

Query: 68  TGFNAL-RRNP-GSNNTLRLLAVLSNAGEMVYFFFDHFLWLSRIG 110
              +AL    P G+   L LL    NA    + F D F+WL R G
Sbjct: 67  NDLHALISPTPQGTPLPLALLGKSKNALLSTFLFLDQFVWLGRTG 111


>Glyma18g46140.3 
          Length = 235

 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 9/105 (8%)

Query: 8   LVIFLAKRDGIDKLVKTFQYVSKLVNWHVEATNPDMSKRFKQWEVASGLSRKAFRTGRFL 67
           LV++L K +  DK+ +  QY SK ++     T  ++ K        + L+RK FR  +F+
Sbjct: 14  LVLYLGKAEARDKICRAIQYGSKFLSNGEPGTAQNVDK-------TTSLARKVFRLFKFV 66

Query: 68  TGFNAL-RRNP-GSNNTLRLLAVLSNAGEMVYFFFDHFLWLSRIG 110
              +AL    P G+   L LL    NA    + F D F+WL R G
Sbjct: 67  NDLHALISPTPQGTPLPLILLGKSKNALLSTFLFLDQFVWLGRTG 111


>Glyma18g46140.2 
          Length = 235

 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 9/105 (8%)

Query: 8   LVIFLAKRDGIDKLVKTFQYVSKLVNWHVEATNPDMSKRFKQWEVASGLSRKAFRTGRFL 67
           LV++L K +  DK+ +  QY SK ++     T  ++ K        + L+RK FR  +F+
Sbjct: 14  LVLYLGKAEARDKICRAIQYGSKFLSNGEPGTAQNVDK-------TTSLARKVFRLFKFV 66

Query: 68  TGFNAL-RRNP-GSNNTLRLLAVLSNAGEMVYFFFDHFLWLSRIG 110
              +AL    P G+   L LL    NA    + F D F+WL R G
Sbjct: 67  NDLHALISPTPQGTPLPLILLGKSKNALLSTFLFLDQFVWLGRTG 111


>Glyma18g46140.1 
          Length = 235

 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 9/105 (8%)

Query: 8   LVIFLAKRDGIDKLVKTFQYVSKLVNWHVEATNPDMSKRFKQWEVASGLSRKAFRTGRFL 67
           LV++L K +  DK+ +  QY SK ++     T  ++ K        + L+RK FR  +F+
Sbjct: 14  LVLYLGKAEARDKICRAIQYGSKFLSNGEPGTAQNVDK-------TTSLARKVFRLFKFV 66

Query: 68  TGFNAL-RRNP-GSNNTLRLLAVLSNAGEMVYFFFDHFLWLSRIG 110
              +AL    P G+   L LL    NA    + F D F+WL R G
Sbjct: 67  NDLHALISPTPQGTPLPLILLGKSKNALLSTFLFLDQFVWLGRTG 111