Miyakogusa Predicted Gene

Lj3g3v3639580.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3639580.1 Non Chatacterized Hit- tr|I3SGH6|I3SGH6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,SUBFAMILY
NOT NAMED,NULL; MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE
SUBUNIT TIM22,NULL; seg,NU,CUFF.46077.1
         (163 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g35780.1                                                       222   1e-58
Glyma12g01980.2                                                       221   2e-58
Glyma12g01980.1                                                       221   2e-58
Glyma02g40350.1                                                        98   4e-21

>Glyma09g35780.1 
          Length = 170

 Score =  222 bits (565), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 114/169 (67%), Positives = 120/169 (71%), Gaps = 6/169 (3%)

Query: 1   MADDSGQATSN------EVEKPQIEPIRLPSVEEIRGQDIWNNCAVRXXXXXXXXXXXXX 54
           MADDS +   N       +E PQIEPIRLPSVEEIRGQDIWNNCAVR             
Sbjct: 1   MADDSAKGIENASLNSTRLENPQIEPIRLPSVEEIRGQDIWNNCAVRSVVSGVMGGGLGI 60

Query: 55  XXXXXXXALDNPIMQEEMTGRQQLIYQAKQMGRRSISSAKAFAVMGFIFSAAECVVEKAR 114
                  ALDNP+MQEEMTGRQQLIYQAKQMGRRS SSAKAFAVMGFIFSAAECVVEKAR
Sbjct: 61  FMGLFLGALDNPLMQEEMTGRQQLIYQAKQMGRRSWSSAKAFAVMGFIFSAAECVVEKAR 120

Query: 115 AKHDMTNTAVAGCTTGGVISAKGGPRXXXXXXXXXXXXSVLIEKFLEGH 163
           AKHD+TNT VAGC TGG ISAKGGP+            SV+IEKFLE H
Sbjct: 121 AKHDITNTVVAGCATGGAISAKGGPKAACAGCAGFAAFSVVIEKFLERH 169


>Glyma12g01980.2 
          Length = 170

 Score =  221 bits (564), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 113/169 (66%), Positives = 120/169 (71%), Gaps = 6/169 (3%)

Query: 1   MADDSGQATSN------EVEKPQIEPIRLPSVEEIRGQDIWNNCAVRXXXXXXXXXXXXX 54
           MADDS +   N      ++E PQIEPIRLPSVEEIRGQDIWNNCAVR             
Sbjct: 1   MADDSAKGIENASLNSTQLENPQIEPIRLPSVEEIRGQDIWNNCAVRSVVSGVMGGGLGI 60

Query: 55  XXXXXXXALDNPIMQEEMTGRQQLIYQAKQMGRRSISSAKAFAVMGFIFSAAECVVEKAR 114
                  ALDNP+MQEEMTGRQQ IYQAKQMGRRS SSAKAFAVMGFIFSAAECVVEKAR
Sbjct: 61  FMGLFLGALDNPLMQEEMTGRQQFIYQAKQMGRRSWSSAKAFAVMGFIFSAAECVVEKAR 120

Query: 115 AKHDMTNTAVAGCTTGGVISAKGGPRXXXXXXXXXXXXSVLIEKFLEGH 163
           AKHD+TNT VAGC TGG ISAKGGP+            SV+IEKFLE H
Sbjct: 121 AKHDITNTVVAGCATGGAISAKGGPKAACAGCAGFAAFSVVIEKFLERH 169


>Glyma12g01980.1 
          Length = 170

 Score =  221 bits (564), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 113/169 (66%), Positives = 120/169 (71%), Gaps = 6/169 (3%)

Query: 1   MADDSGQATSN------EVEKPQIEPIRLPSVEEIRGQDIWNNCAVRXXXXXXXXXXXXX 54
           MADDS +   N      ++E PQIEPIRLPSVEEIRGQDIWNNCAVR             
Sbjct: 1   MADDSAKGIENASLNSTQLENPQIEPIRLPSVEEIRGQDIWNNCAVRSVVSGVMGGGLGI 60

Query: 55  XXXXXXXALDNPIMQEEMTGRQQLIYQAKQMGRRSISSAKAFAVMGFIFSAAECVVEKAR 114
                  ALDNP+MQEEMTGRQQ IYQAKQMGRRS SSAKAFAVMGFIFSAAECVVEKAR
Sbjct: 61  FMGLFLGALDNPLMQEEMTGRQQFIYQAKQMGRRSWSSAKAFAVMGFIFSAAECVVEKAR 120

Query: 115 AKHDMTNTAVAGCTTGGVISAKGGPRXXXXXXXXXXXXSVLIEKFLEGH 163
           AKHD+TNT VAGC TGG ISAKGGP+            SV+IEKFLE H
Sbjct: 121 AKHDITNTVVAGCATGGAISAKGGPKAACAGCAGFAAFSVVIEKFLERH 169


>Glyma02g40350.1 
          Length = 82

 Score = 97.8 bits (242), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 51/75 (68%), Positives = 53/75 (70%), Gaps = 15/75 (20%)

Query: 62  ALDNPIMQEEMTGRQQLIYQAKQMGRRSISSAKAFAVMGFIFSAAECVVEKARAKHDMTN 121
           ALD P+MQEEMTGRQQLIYQAKQMGRR  SSAKAFAVM               AKHDMTN
Sbjct: 15  ALDKPLMQEEMTGRQQLIYQAKQMGRRRWSSAKAFAVM---------------AKHDMTN 59

Query: 122 TAVAGCTTGGVISAK 136
           T VA C +GG ISAK
Sbjct: 60  TVVAACASGGAISAK 74