Miyakogusa Predicted Gene
- Lj3g3v3639450.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3639450.1 tr|A9TS65|A9TS65_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,71.43,1e-18,seg,NULL,CUFF.46066.1
(266 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma11g11600.1 334 6e-92
Glyma11g11600.2 182 2e-46
Glyma06g15100.1 108 8e-24
Glyma06g15100.2 105 4e-23
Glyma04g39770.1 56 5e-08
Glyma09g09460.1 54 2e-07
>Glyma11g11600.1
Length = 255
Score = 334 bits (857), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 181/262 (69%), Positives = 203/262 (77%), Gaps = 16/262 (6%)
Query: 1 MNSLVVSSHTSSFRTFPHSSSTQSFNLFPNLRQPTFLNFHFFSSKFKPPHF--IACCXXX 58
MNSL+ S+ SS + HSS+ LRQP FL F SS K F +A C
Sbjct: 3 MNSLLASTRASSSPLYQHSSTL-------TLRQPHFL---FISSNSKSSAFPLVAYCSSA 52
Query: 59 XXXXXXXXXXXXILQNDIFHAEVTTPNVPSFASPVSKFSFTDQAFFLITFIACTTSVTFT 118
IL N FH++VTTP +P F SPV K SF+DQAFFL+ FIA TTSV FT
Sbjct: 53 PSPNESDQT---ILLNGTFHSQVTTPKIPPFVSPVPKLSFSDQAFFLLAFIASTTSVAFT 109
Query: 119 SLVFAAVPTLFAMRNAAISLSKLADTAREELPSTMAAIRLSGMEISDLTLELSDLSQEIA 178
SLVFAAVPTLFAMRNAA+SLSKLADTAREELPSTMAAIRLSGMEISDLTLELSDLSQEIA
Sbjct: 110 SLVFAAVPTLFAMRNAALSLSKLADTAREELPSTMAAIRLSGMEISDLTLELSDLSQEIA 169
Query: 179 DGVNKSAQALQAAEAGIKQIGSMAQEQTMSMIEERANLPIISLQPVVVGAARKTSRAVGR 238
DGVNKSAQALQAAEAGI+QIGS+AQ+QT+SMI+ERA+LP+ISLQP V GAARKTSRAVGR
Sbjct: 170 DGVNKSAQALQAAEAGIRQIGSVAQQQTVSMIQERASLPVISLQPAVAGAARKTSRAVGR 229
Query: 239 ATKSLMNIISGKE-GTSEYDDD 259
ATKSL+NIISG++ T+EYDDD
Sbjct: 230 ATKSLLNIISGRQDATAEYDDD 251
>Glyma11g11600.2
Length = 166
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 121/177 (68%), Gaps = 15/177 (8%)
Query: 1 MNSLVVSSHTSSFRTFPHSSSTQSFNLFPNLRQPTFLNFHFFSSKFKPPHF--IACCXXX 58
MNSL+ S+ SS + HSS+ LRQP FL F SS K F +A C
Sbjct: 3 MNSLLASTRASSSPLYQHSSTL-------TLRQPHFL---FISSNSKSSAFPLVAYCSSA 52
Query: 59 XXXXXXXXXXXXILQNDIFHAEVTTPNVPSFASPVSKFSFTDQAFFLITFIACTTSVTFT 118
IL N FH++VTTP +P F SPV K SF+DQAFFL+ FIA TTSV FT
Sbjct: 53 PSPNESDQT---ILLNGTFHSQVTTPKIPPFVSPVPKLSFSDQAFFLLAFIASTTSVAFT 109
Query: 119 SLVFAAVPTLFAMRNAAISLSKLADTAREELPSTMAAIRLSGMEISDLTLELSDLSQ 175
SLVFAAVPTLFAMRNAA+SLSKLADTAREELPSTMAAIRLSGMEISDLTLELSDL +
Sbjct: 110 SLVFAAVPTLFAMRNAALSLSKLADTAREELPSTMAAIRLSGMEISDLTLELSDLRK 166
>Glyma06g15100.1
Length = 239
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 96/175 (54%), Gaps = 13/175 (7%)
Query: 93 VSKFSFTDQAFFLITFIACTTSVTFTSLVFAAVPTLFAMRNAAISLSKLADTAREELPST 152
+ ++ T++ ++ AC T++ T L +A+PTL A + AA S+ KL D REELP+T
Sbjct: 64 LQHWNLTNRHVTVLNVFACATAICATWLFCSAIPTLLAFKKAAESMEKLMDATREELPNT 123
Query: 153 MAAIRLSGMEISDLTLELSDLSQEIADGVNKSAQALQAAEAGIKQIGSMAQEQTMSMIEE 212
MAAIRLSGMEISDLT ELSD+ QEI GV S +A++ AE ++++ ++ ++ +
Sbjct: 124 MAAIRLSGMEISDLTTELSDIGQEITQGVRSSTRAVRLAEERLRRLTTVPSSASLQGMTI 183
Query: 213 RANLPIISLQPVVVGAARKTSRAV--GRATKSL-----------MNIISGKEGTS 254
+P V AR + GRAT + +N I+G+ S
Sbjct: 184 NPKAEYDDDEPAVARTARGVREGIVKGRATLQMFFTLTRFSRFALNFITGRRKLS 238
>Glyma06g15100.2
Length = 183
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 75/109 (68%)
Query: 93 VSKFSFTDQAFFLITFIACTTSVTFTSLVFAAVPTLFAMRNAAISLSKLADTAREELPST 152
+ ++ T++ ++ AC T++ T L +A+PTL A + AA S+ KL D REELP+T
Sbjct: 64 LQHWNLTNRHVTVLNVFACATAICATWLFCSAIPTLLAFKKAAESMEKLMDATREELPNT 123
Query: 153 MAAIRLSGMEISDLTLELSDLSQEIADGVNKSAQALQAAEAGIKQIGSM 201
MAAIRLSGMEISDLT ELSD+ QEI GV S +A++ AE ++++ ++
Sbjct: 124 MAAIRLSGMEISDLTTELSDIGQEITQGVRSSTRAVRLAEERLRRLTTV 172
>Glyma04g39770.1
Length = 138
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 81 VTTPNVPSFASPVSKFSFTDQAFFLITFIACTTSVTFTSLVFAAVPTLFAMRNAAISLSK 140
V +P++P ++ T++ ++ AC T++ T L +A+PTL A + AA S+ K
Sbjct: 62 VGSPSLP-------HWNLTNRHVTVLNVFACATAICATWLFCSAIPTLLAFKKAAESMEK 114
Query: 141 LADTAREELPSTMAAI 156
L D REELP+TMA I
Sbjct: 115 LMDATREELPNTMAVI 130
>Glyma09g09460.1
Length = 189
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 117 FTSLVFAAVPTLFAMRNAAISLSKLADTAREELPSTMAAIRLSGMEISDLTLELSDLSQE 176
F S+ ++PTL A S+ KL+ EE+P T+ +++LS ME++DLT +LS L +
Sbjct: 104 FFSVAVFSIPTLIAFGRLGASVKKLSKVVSEEVPGTLHSLKLSSMELNDLTQQLSSLRHK 163
Query: 177 IADGVNKSAQ 186
IA G++K Q
Sbjct: 164 IA-GISKGKQ 172