Miyakogusa Predicted Gene
- Lj3g3v3639420.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3639420.1 tr|B9N805|B9N805_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_584526 PE=4
SV=1,43.97,0.0000000000006,ZF_C3H1,Zinc finger, CCCH-type; no
description,NULL; seg,NULL; SUBFAMILY NOT NAMED,NULL;
MAKORIN-REL,CUFF.46062.1
(338 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma11g11630.2 410 e-114
Glyma11g11630.1 408 e-114
Glyma12g01910.1 193 2e-49
Glyma12g01910.2 193 2e-49
Glyma12g01900.1 117 2e-26
>Glyma11g11630.2
Length = 375
Score = 410 bits (1053), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/349 (64%), Positives = 256/349 (73%), Gaps = 20/349 (5%)
Query: 1 MRDVCRNFQRGSCQYGERCKFLHAVQTQRKPN--------HSYQHQNTNNPFGFGXXXXX 52
MRD+CRNFQRGSCQYGERC++LH VQ QRKPN SYQ QNTN FG
Sbjct: 1 MRDICRNFQRGSCQYGERCRYLH-VQQQRKPNVNGFGGQSSSYQQQNTN---PFGFGSGS 56
Query: 53 XXXXQQRTNPFGFGSQNSSYSNAPSHSDFKPNQFKPFENKWSRSSSQPQTGASRQSDNNS 112
QQ+ NPFGFG QNSS N HS+ KPNQ+KPFENKW+R SS+PQ + S+NNS
Sbjct: 57 QQQQQQKGNPFGFGKQNSSQLNGGPHSEHKPNQYKPFENKWNRQSSKPQQNGVK-SENNS 115
Query: 113 QSVNHKCTDPEICKRQIAEDFENEKPLWILTCYTHSRGAPCDIVGDISYEELRAAAYEDA 172
+ +H CTDPE CKRQIA DFE EKPLWILTCY+H +GAPCDIVGDISYEELRA+AYEDA
Sbjct: 116 KQTDHICTDPENCKRQIAVDFEQEKPLWILTCYSHCKGAPCDIVGDISYEELRASAYEDA 175
Query: 173 KKGMSLQSIVEKERNILKSKLIEFEKLRSEPYNIPLDLSLDIQNHQSNV--AHANPFSPT 230
K+GM+LQSIVEKERNIL SKL+EF+KL SEPY IP+ SL QS V A+ANPFS T
Sbjct: 176 KRGMNLQSIVEKERNILNSKLVEFQKLLSEPYQIPISSSLGSPTPQSIVANANANPFS-T 234
Query: 231 TQNSGPLSVSSFSQLGASLNAGFERTSAPQMNTLAQPNSFGSGGNFLTS-NTPNLFGSSI 289
+Q++GPLSVSSFSQL LN GFER SAP NTL +P FGSGGN L S N NL S++
Sbjct: 235 SQSNGPLSVSSFSQLSTPLNMGFERPSAPLTNTLTKPGFFGSGGNSLASNNAANLNSSAV 294
Query: 290 SGVQSSPFSAPAQVTMFPGSMSQPQQSPVAFNGSSSTTMFQTTSDVQLN 338
GVQS P+S P + MFPGS QQ+ AFN S TTMFQTT DVQLN
Sbjct: 295 FGVQSGPYSTPVDLNMFPGST---QQTLTAFNNSDPTTMFQTTPDVQLN 340
>Glyma11g11630.1
Length = 376
Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/348 (64%), Positives = 255/348 (73%), Gaps = 20/348 (5%)
Query: 1 MRDVCRNFQRGSCQYGERCKFLHAVQTQRKPN--------HSYQHQNTNNPFGFGXXXXX 52
MRD+CRNFQRGSCQYGERC++LH VQ QRKPN SYQ QNTN FG
Sbjct: 1 MRDICRNFQRGSCQYGERCRYLH-VQQQRKPNVNGFGGQSSSYQQQNTN---PFGFGSGS 56
Query: 53 XXXXQQRTNPFGFGSQNSSYSNAPSHSDFKPNQFKPFENKWSRSSSQPQTGASRQSDNNS 112
QQ+ NPFGFG QNSS N HS+ KPNQ+KPFENKW+R SS+PQ + S+NNS
Sbjct: 57 QQQQQQKGNPFGFGKQNSSQLNGGPHSEHKPNQYKPFENKWNRQSSKPQQNGVK-SENNS 115
Query: 113 QSVNHKCTDPEICKRQIAEDFENEKPLWILTCYTHSRGAPCDIVGDISYEELRAAAYEDA 172
+ +H CTDPE CKRQIA DFE EKPLWILTCY+H +GAPCDIVGDISYEELRA+AYEDA
Sbjct: 116 KQTDHICTDPENCKRQIAVDFEQEKPLWILTCYSHCKGAPCDIVGDISYEELRASAYEDA 175
Query: 173 KKGMSLQSIVEKERNILKSKLIEFEKLRSEPYNIPLDLSLDIQNHQSNV--AHANPFSPT 230
K+GM+LQSIVEKERNIL SKL+EF+KL SEPY IP+ SL QS V A+ANPFS T
Sbjct: 176 KRGMNLQSIVEKERNILNSKLVEFQKLLSEPYQIPISSSLGSPTPQSIVANANANPFS-T 234
Query: 231 TQNSGPLSVSSFSQLGASLNAGFERTSAPQMNTLAQPNSFGSGGNFLTS-NTPNLFGSSI 289
+Q++GPLSVSSFSQL LN GFER SAP NTL +P FGSGGN L S N NL S++
Sbjct: 235 SQSNGPLSVSSFSQLSTPLNMGFERPSAPLTNTLTKPGFFGSGGNSLASNNAANLNSSAV 294
Query: 290 SGVQSSPFSAPAQVTMFPGSMSQPQQSPVAFNGSSSTTMFQTTSDVQL 337
GVQS P+S P + MFPGS QQ+ AFN S TTMFQTT DVQL
Sbjct: 295 FGVQSGPYSTPVDLNMFPGST---QQTLTAFNNSDPTTMFQTTPDVQL 339
>Glyma12g01910.1
Length = 206
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/170 (63%), Positives = 125/170 (73%), Gaps = 4/170 (2%)
Query: 168 AYEDAKKGMSLQSIVEKERNILKSKLIEFEKLRSEPYNIPLDLSLDIQNHQSNVAHANPF 227
AYEDA +GMSLQSIVEKERNILKSKL+EF+KL SEPY IP+ SL Q QS A+ANPF
Sbjct: 4 AYEDANRGMSLQSIVEKERNILKSKLVEFDKLLSEPYKIPISSSLGSQTPQSIGANANPF 63
Query: 228 SPTTQNSGPLSVSSFSQLGASLNAGFERTSAPQMNTLAQPNSFGSGGNFLTSNTPNLFGS 287
S T+Q++GPLSVSSFSQL LN GFER SAP NT +P FGSGGN L SNT NL +
Sbjct: 64 S-TSQSNGPLSVSSFSQLSTPLNMGFERPSAPLTNTPTKPGFFGSGGNSLASNTANLNSN 122
Query: 288 SISGVQSSPFSAPAQVTMFPGSMSQPQQSPVAFNGSSSTTMFQTTSDVQL 337
+ GVQS P+S P + MFPGS Q++ AF+ S T+MFQTT DVQL
Sbjct: 123 GVFGVQSGPYSTPLDLKMFPGST---QETSTAFSNSGPTSMFQTTPDVQL 169
>Glyma12g01910.2
Length = 205
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/170 (63%), Positives = 125/170 (73%), Gaps = 4/170 (2%)
Query: 168 AYEDAKKGMSLQSIVEKERNILKSKLIEFEKLRSEPYNIPLDLSLDIQNHQSNVAHANPF 227
AYEDA +GMSLQSIVEKERNILKSKL+EF+KL SEPY IP+ SL Q QS A+ANPF
Sbjct: 4 AYEDANRGMSLQSIVEKERNILKSKLVEFDKLLSEPYKIPISSSLGSQTPQSIGANANPF 63
Query: 228 SPTTQNSGPLSVSSFSQLGASLNAGFERTSAPQMNTLAQPNSFGSGGNFLTSNTPNLFGS 287
S T+Q++GPLSVSSFSQL LN GFER SAP NT +P FGSGGN L SNT NL +
Sbjct: 64 S-TSQSNGPLSVSSFSQLSTPLNMGFERPSAPLTNTPTKPGFFGSGGNSLASNTANLNSN 122
Query: 288 SISGVQSSPFSAPAQVTMFPGSMSQPQQSPVAFNGSSSTTMFQTTSDVQL 337
+ GVQS P+S P + MFPGS Q++ AF+ S T+MFQTT DVQL
Sbjct: 123 GVFGVQSGPYSTPLDLKMFPGST---QETSTAFSNSGPTSMFQTTPDVQL 169
>Glyma12g01900.1
Length = 148
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 82/129 (63%), Gaps = 12/129 (9%)
Query: 1 MRDVCRNFQRGSCQYGERCKFLHAVQTQRKPN--------HSYQHQNTNNPFGFGXXXXX 52
MRD+CRNFQRGSCQYGERC++LH VQ QRKPN S+Q QNTN FG
Sbjct: 1 MRDICRNFQRGSCQYGERCRYLH-VQQQRKPNVNGFGGQSSSHQQQNTN---PFGFGSGS 56
Query: 53 XXXXQQRTNPFGFGSQNSSYSNAPSHSDFKPNQFKPFENKWSRSSSQPQTGASRQSDNNS 112
QQ+ NPFGFG NSS N HS+ KPNQ+KPFENKW+R SS+PQ + +N
Sbjct: 57 GSQQQQKGNPFGFGKHNSSQLNGGPHSENKPNQYKPFENKWNRQSSKPQQNGVKSENNPK 116
Query: 113 QSVNHKCTD 121
QS +H D
Sbjct: 117 QSEHHIIMD 125