Miyakogusa Predicted Gene
- Lj3g3v3639350.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3639350.1 tr|B9MZM2|B9MZM2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_595516 PE=4
SV=1,32.62,7e-18,seg,NULL;
Frigida,Frigida-like,NODE_42918_length_2395_cov_23.117329.path1.1
(453 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma11g11690.1 152 8e-37
Glyma03g23740.1 63 5e-10
Glyma17g18000.1 63 8e-10
Glyma03g23760.1 61 2e-09
Glyma05g21790.1 60 6e-09
Glyma16g08590.1 57 3e-08
Glyma08g43760.1 51 3e-06
>Glyma11g11690.1
Length = 369
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 118/189 (62%), Gaps = 5/189 (2%)
Query: 1 MRISPSPHIRPQTRGAAKKLAMDLKANFYPIDENXXXXXXXXXXXXXXXXXXXFNEDEVL 60
MRISP ++P+ R A K+A LKAN EN F +DE+
Sbjct: 108 MRISP--RVKPRVREEALKIAFALKANIRESAENSLTILGFLLLLSAYGLVSYFRKDELF 165
Query: 61 KLFELVAQHKLAVELFRTLGFSDKISDLVENLIMKKRYVGAVRFICAYKLTDKIDPVGLL 120
K E AQHK AVELFRTLGF DKI D V NLIMK++++ AVRFICAYKL DKI PV LL
Sbjct: 166 KQLESAAQHKQAVELFRTLGFVDKIFDFVRNLIMKQQHIEAVRFICAYKLADKIQPVDLL 225
Query: 121 RLQIARANQLF-RYG-RKKPIAKKVRGKDLEIRILGEVLQCISDNNLGS-QDLVNEIQDR 177
R +A+ + R+ K+ + +K++ +D EI L VL+CIS+NNL S QDLV EI DR
Sbjct: 226 RQHVAKVKSVTNRFACMKESVEQKIKVRDEEIVGLRTVLECISENNLESHQDLVKEINDR 285
Query: 178 ILAIKQEKE 186
I+ ++++KE
Sbjct: 286 IVDLEKQKE 294
>Glyma03g23740.1
Length = 544
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 74/137 (54%), Gaps = 4/137 (2%)
Query: 54 FNEDEVLKLFELVAQHKLAVELFRTLGFSDKISDLVENLIMKKRYVGAVRFICAYKLTDK 113
FNE+E+ +L +V++ + +L R LG S+K+ ++E L+ R + AV A+ LT++
Sbjct: 316 FNEEELSRLIPMVSRRRQTADLCRCLGLSEKMPGVIEVLVNSGRQIDAVNLAFAFDLTEQ 375
Query: 114 IDPVGLLRLQIARANQL---FRYGRKKPIAKKVRGKDLEIRILGEVLQCISDNNLGSQDL 170
P+ LL+ + A ++ R P A ++ D E+ L V++CI D+ L Q
Sbjct: 376 FSPIPLLKSYLKDARKISSPVRSVNSSPTA-QIDVNDRELIALKAVIKCIEDHKLDDQYP 434
Query: 171 VNEIQDRILAIKQEKEE 187
++ +Q R +++ K +
Sbjct: 435 LDPLQKRATQLEKAKAD 451
>Glyma17g18000.1
Length = 537
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 75/135 (55%), Gaps = 3/135 (2%)
Query: 54 FNEDEVLKLFELVAQHKLAVELFRTLGFSDKISDLVENLIMKKRYVGAVRFICAYKLTDK 113
F+E+E+ KL VAQ + A EL R++G K+ +VE+LI + + AV FI A++L +
Sbjct: 254 FDEEELCKLVLAVAQLRQAPELCRSIGLIHKMPVVVESLINNGKQIAAVHFIHAFQLQES 313
Query: 114 IDPVGLLR--LQIARANQLFRYGRKKPIAK-KVRGKDLEIRILGEVLQCISDNNLGSQDL 170
PV LL+ L+ R N + G + IA K E+ L V++CI + L S+
Sbjct: 314 FPPVPLLKAYLKNRRRNSQVKTGNVRDIASAKNDANAQELSALRAVIKCIEEYKLESEYP 373
Query: 171 VNEIQDRILAIKQEK 185
+ ++ R+L +++ K
Sbjct: 374 PDTLRKRVLQLEKSK 388
>Glyma03g23760.1
Length = 546
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 78/137 (56%), Gaps = 4/137 (2%)
Query: 54 FNEDEVLKLFELVAQHKLAVELFRTLGFSDKISDLVENLIMKKRYVGAVRFICAYKLTDK 113
F+E+E+ +L +V++ + +L R LG S+K+ ++E L+ R + AV A+ LT++
Sbjct: 317 FDEEELSRLIPMVSRRRQTADLCRFLGLSEKMPGVIEVLVNSGRQIDAVNLAFAFDLTEQ 376
Query: 114 IDPVGLLR--LQIAR-ANQLFRYGRKKPIAKKVRGKDLEIRILGEVLQCISDNNLGSQDL 170
PV LL+ L+ AR A+ R P A ++ + E+ L V++CI ++ L Q
Sbjct: 377 FCPVSLLKSYLKDARKASSPVRSAHSSPTA-QIEVNERELVALKAVIKCIEEHKLDEQYP 435
Query: 171 VNEIQDRILAIKQEKEE 187
++ +Q R++ +++ K +
Sbjct: 436 LDPLQKRLVQLEKAKAD 452
>Glyma05g21790.1
Length = 543
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 9 IRPQTRGAAKKLAMDLKANFYPIDE-----NXXXXXXXXXXXXXXXXXXXFNEDEVLKLF 63
+ PQT+ AK +A + + N D N F+E+E+ KL
Sbjct: 254 LNPQTKQHAKAIADEWRPNLARADTDAANGNSLEAKAFFQLISTFKIASEFDEEELCKLV 313
Query: 64 ELVAQHKLAVELFRTLGFSDKISDLVENLIMKKRYVGAVRFICAYKLTDKIDPVGLLR-- 121
VAQ + A EL ++G K+ +VE+LI + + AV FI A++L + PV LL+
Sbjct: 314 LAVAQLRQAPELCCSIGLIHKMPAVVESLINTGKQIAAVHFIHAFQLQESFPPVPLLKAY 373
Query: 122 LQIARANQLFRYGRKKPI-AKKVRGKDLEIRILGEVLQCISDNNLGSQDLVNEIQDRILA 180
L+ R N + G + I + K E+ L V++CI + L S + ++ R+L
Sbjct: 374 LKNRRRNSQVKTGNVRDITSAKNDANAQELAALRAVIKCIEEYKLESDYPPDTLRKRVLQ 433
Query: 181 IKQEK 185
+++ K
Sbjct: 434 LEKSK 438
>Glyma16g08590.1
Length = 546
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 77/137 (56%), Gaps = 4/137 (2%)
Query: 54 FNEDEVLKLFELVAQHKLAVELFRTLGFSDKISDLVENLIMKKRYVGAVRFICAYKLTDK 113
F+E+E+ +L +V++ + +L R LG S+K+ ++ L+ R + AV A+ LT++
Sbjct: 317 FDEEELSRLIPMVSRRRQTADLCRFLGLSEKMPGVIGVLVNSGRQIDAVNLAFAFDLTEQ 376
Query: 114 IDPVGLLR--LQIAR-ANQLFRYGRKKPIAKKVRGKDLEIRILGEVLQCISDNNLGSQDL 170
PV LL+ L+ AR A+ R P A ++ + E+ L V++CI ++ L Q
Sbjct: 377 FCPVSLLKSYLKDARKASSPVRSVNSSPTA-QIEVNERELVALKAVIKCIEEHKLDEQYP 435
Query: 171 VNEIQDRILAIKQEKEE 187
++ +Q R++ +++ K +
Sbjct: 436 LDPLQKRLVQLEKAKAD 452
>Glyma08g43760.1
Length = 540
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Query: 74 ELFRTLGFSDKISDLVENLIMKKRYVGAVRFICAYKLTDKIDPVGLLRLQIARA----NQ 129
EL RT+G ++++ D+V+ LI K +++ AV++I + L D+I PV +L+ + A +
Sbjct: 268 ELCRTIGLTERVPDIVQKLIDKDKHIPAVKYILEFNLADRISPVPILKACVEEAKKLGKR 327
Query: 130 LFRYGRKKPIAKKVRGKDLEIRILGEVLQCISDNNLGSQDLVNEIQDRILAIKQEK 185
LF+ G+ EI L V++ I L S+ + ++ I +K++K
Sbjct: 328 LFQEGKSLN-----ESTSREINTLRMVIKTIESYKLESEYPLASLEQHIEQLKRQK 378