Miyakogusa Predicted Gene

Lj3g3v3617830.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3617830.1 Non Chatacterized Hit- tr|B6TI72|B6TI72_MAIZE
Putative uncharacterized protein OS=Zea mays PE=2
SV=1,48.7,1e-18,SUBFAMILY NOT NAMED,NULL; PPP4R2-RELATED PROTEIN,NULL;
seg,NULL; PPP4R2,Protein phosphatase 4 core r,CUFF.46688.1
         (282 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g02130.3                                                       290   2e-78
Glyma12g02130.1                                                       290   2e-78
Glyma11g09810.1                                                       281   6e-76
Glyma12g02130.2                                                       238   4e-63

>Glyma12g02130.3 
          Length = 232

 Score =  290 bits (741), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 151/235 (64%), Positives = 172/235 (73%), Gaps = 27/235 (11%)

Query: 48  SNHKDVEQKFDVPREQVTQILQAIASTGKFWHEWDNLKSMLSFQLKQVLSEYPEAKVTTE 107
           SNH+D EQK DV RE+V QILQ IASTG+FWH+WD LKSMLSFQLKQVLSEYPEA++T+E
Sbjct: 25  SNHRDAEQKQDVSREEVVQILQVIASTGRFWHDWDKLKSMLSFQLKQVLSEYPEARMTSE 84

Query: 108 EQYASLGESYFELVHKLDEELTCFIDGPPFTLQRLCEILLDAKSIYPNLSKLALALEKNL 167
           +QYAS GESY ELV+KLDEELTCFI+GPPFTLQRLCEILLDAK +YPNLSKLALALEKNL
Sbjct: 85  QQYASFGESYIELVNKLDEELTCFIEGPPFTLQRLCEILLDAKGLYPNLSKLALALEKNL 144

Query: 168 LVTSTLAISTDPCPQVTVQETNEQENASXXXXXXXXXXXXXXXXXXXXSDSAQNGIEPSV 227
           LVTSTL I TDP PQ T +E ++QE  S                    SDSA+NG+    
Sbjct: 145 LVTSTLTICTDPYPQATAKELDDQEKPS------------EKQQQQQQSDSAENGV---- 188

Query: 228 ATDKDEVMAADKDEVMAEAEADTRDDMTVDTEAFEDAKPPETISEPNSETNSNSA 282
                E++ +DKDEVM   EAD  DDMT+  EAFE  K  ET    NSE N+NSA
Sbjct: 189 -----ELLVSDKDEVM--TEADVGDDMTIGMEAFEGVKSSET----NSELNANSA 232


>Glyma12g02130.1 
          Length = 232

 Score =  290 bits (741), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 151/235 (64%), Positives = 172/235 (73%), Gaps = 27/235 (11%)

Query: 48  SNHKDVEQKFDVPREQVTQILQAIASTGKFWHEWDNLKSMLSFQLKQVLSEYPEAKVTTE 107
           SNH+D EQK DV RE+V QILQ IASTG+FWH+WD LKSMLSFQLKQVLSEYPEA++T+E
Sbjct: 25  SNHRDAEQKQDVSREEVVQILQVIASTGRFWHDWDKLKSMLSFQLKQVLSEYPEARMTSE 84

Query: 108 EQYASLGESYFELVHKLDEELTCFIDGPPFTLQRLCEILLDAKSIYPNLSKLALALEKNL 167
           +QYAS GESY ELV+KLDEELTCFI+GPPFTLQRLCEILLDAK +YPNLSKLALALEKNL
Sbjct: 85  QQYASFGESYIELVNKLDEELTCFIEGPPFTLQRLCEILLDAKGLYPNLSKLALALEKNL 144

Query: 168 LVTSTLAISTDPCPQVTVQETNEQENASXXXXXXXXXXXXXXXXXXXXSDSAQNGIEPSV 227
           LVTSTL I TDP PQ T +E ++QE  S                    SDSA+NG+    
Sbjct: 145 LVTSTLTICTDPYPQATAKELDDQEKPS------------EKQQQQQQSDSAENGV---- 188

Query: 228 ATDKDEVMAADKDEVMAEAEADTRDDMTVDTEAFEDAKPPETISEPNSETNSNSA 282
                E++ +DKDEVM   EAD  DDMT+  EAFE  K  ET    NSE N+NSA
Sbjct: 189 -----ELLVSDKDEVM--TEADVGDDMTIGMEAFEGVKSSET----NSELNANSA 232


>Glyma11g09810.1 
          Length = 234

 Score =  281 bits (719), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 149/229 (65%), Positives = 168/229 (73%), Gaps = 24/229 (10%)

Query: 48  SNHKDVEQKFDV-PREQVTQILQAIASTGKFWHEWDNLKSMLSFQLKQVLSEYPEAKVTT 106
           S+H+D EQK D+   E+V QILQ +ASTG+FWH+WD LKSMLSFQLKQVLSEYPEAK+T+
Sbjct: 26  SDHRDAEQKQDILSTEEVVQILQVVASTGRFWHDWDKLKSMLSFQLKQVLSEYPEAKMTS 85

Query: 107 EEQYASLGESYFELVHKLDEELTCFIDGPPFTLQRLCEILLDAKSIYPNLSKLALALEKN 166
           E+QYASLGESY ELV+KLDE LTCFI+GPPFTLQRLCEILLDAK IYPNLSKLALALEKN
Sbjct: 86  EQQYASLGESYIELVNKLDEALTCFIEGPPFTLQRLCEILLDAKGIYPNLSKLALALEKN 145

Query: 167 LLVTSTLAISTDPCPQVTVQETNEQENASXXXXXXXXXXXXXXXXXXXXSDSAQNGIEPS 226
           LLVTSTL I TDP PQ T +E ++QE AS                    SDSAQNGIEP 
Sbjct: 146 LLVTSTLTICTDPYPQATEKEPDDQEKAS------------EKQQQQQQSDSAQNGIEP- 192

Query: 227 VATDKDEVMAADKDEVMAEAEADTRDDMTVDTEAFEDAKPPETISEPNS 275
                   + +D DEVM   EAD  DDMT+D EAFE  K  E  SEPN+
Sbjct: 193 --------LVSDNDEVM--PEADVGDDMTIDMEAFEGVKSSEINSEPNA 231


>Glyma12g02130.2 
          Length = 177

 Score =  238 bits (608), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 128/204 (62%), Positives = 146/204 (71%), Gaps = 27/204 (13%)

Query: 79  HEWDNLKSMLSFQLKQVLSEYPEAKVTTEEQYASLGESYFELVHKLDEELTCFIDGPPFT 138
           H+WD LKSMLSFQLKQVLSEYPEA++T+E+QYAS GESY ELV+KLDEELTCFI+GPPFT
Sbjct: 1   HDWDKLKSMLSFQLKQVLSEYPEARMTSEQQYASFGESYIELVNKLDEELTCFIEGPPFT 60

Query: 139 LQRLCEILLDAKSIYPNLSKLALALEKNLLVTSTLAISTDPCPQVTVQETNEQENASXXX 198
           LQRLCEILLDAK +YPNLSKLALALEKNLLVTSTL I TDP PQ T +E ++QE  S   
Sbjct: 61  LQRLCEILLDAKGLYPNLSKLALALEKNLLVTSTLTICTDPYPQATAKELDDQEKPS--- 117

Query: 199 XXXXXXXXXXXXXXXXXSDSAQNGIEPSVATDKDEVMAADKDEVMAEAEADTRDDMTVDT 258
                            SDSA+NG+         E++ +DKDEVM   EAD  DDMT+  
Sbjct: 118 ---------EKQQQQQQSDSAENGV---------ELLVSDKDEVM--TEADVGDDMTIGM 157

Query: 259 EAFEDAKPPETISEPNSETNSNSA 282
           EAFE  K  ET    NSE N+NSA
Sbjct: 158 EAFEGVKSSET----NSELNANSA 177