Miyakogusa Predicted Gene

Lj3g3v3614670.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3614670.1 Non Chatacterized Hit- tr|K4AK08|K4AK08_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,45,0.000000000000006,seg,NULL; coiled-coil,NULL,CUFF.46031.1
         (498 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g09900.1                                                       612   e-175
Glyma12g02210.1                                                       518   e-147
Glyma17g30850.1                                                       207   2e-53
Glyma06g22090.1                                                       194   2e-49
Glyma01g10180.1                                                       161   2e-39
Glyma04g27630.1                                                        52   1e-06

>Glyma11g09900.1 
          Length = 482

 Score =  612 bits (1578), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 319/455 (70%), Positives = 359/455 (78%), Gaps = 24/455 (5%)

Query: 48  NRLGALFDREKRVPDHKNVPIVLLDHXXXXXXXXXXXXXXX----XXMLRAECNLLRMEK 103
           NRLGAL DRE+R      VPIV+LD+                     MLRAECNLLRMEK
Sbjct: 43  NRLGALIDRERRA----RVPIVVLDNNNSSEGERRREREEKWKFQAEMLRAECNLLRMEK 98

Query: 104 EIAVKKLERTRAKMERILRSAVRTLVSGRIKICEGKNINMVLDEEIHALTEKLQKLQKRS 163
           EIAVKKLERTR KME  LRSA+ TLVSGRIKICEGKN++MVLDEEIH LT+KLQ+L KRS
Sbjct: 99  EIAVKKLERTRVKMETTLRSALHTLVSGRIKICEGKNVDMVLDEEIHELTQKLQRLHKRS 158

Query: 164 LVKDFETRNSRNFDKQVSVLQRRLERIGGPSDEIYLREFEELANVSLSIKTSSRFDDSIV 223
            VKD   R +RNFDKQVSVLQRRL++IGG SDEIYLREF+E+ N+S SIK SS  DD++V
Sbjct: 159 KVKDLGARKNRNFDKQVSVLQRRLDKIGGSSDEIYLREFQEMENISFSIKRSSTVDDNVV 218

Query: 224 ASGKLNVEILRRKMEGLSKGILLQRMEEEYXXXXXXXXXXXXXXXXXXKRVEFQDSSSSI 283
           ASGKLNVEILRRKMEGLSKGILLQRMEEEY                  KRVEFQDSSS +
Sbjct: 219 ASGKLNVEILRRKMEGLSKGILLQRMEEEYNSLLSTASSSLASSGSNSKRVEFQDSSS-V 277

Query: 284 RVPHQEKLSYEGNPCSGHCKSVVRRIVEQVRTETEQWSQMQEMLGQVREEMEELQASRDF 343
           RVPHQEKLS EGNPCSGHCK+VVRRIVEQVRTETEQWSQMQEMLG+VREEMEELQASRDF
Sbjct: 278 RVPHQEKLSCEGNPCSGHCKTVVRRIVEQVRTETEQWSQMQEMLGKVREEMEELQASRDF 337

Query: 344 WEDRALHSDFQIQSLHNSLQEWRQRALSFESEKNELRAKLSMLSGDLERLRKEQNSVQGS 403
           WEDRA HSDFQIQSLHN++QEW+++ALS E++ NE+ A+LS+L GDLERLRKEQN+ +G+
Sbjct: 338 WEDRARHSDFQIQSLHNAVQEWKEKALSSENKTNEVEAELSVLRGDLERLRKEQNAAKGT 397

Query: 404 KCSSIPLDTQNEFEKRVVVCCSKENNSIVTENSKHNEGMRNGERKAHAGR--GGFQAPKR 461
           KC SIP+DTQNE EKR+VVC SKE N +          +R+GERKAH GR  GGF APKR
Sbjct: 398 KCLSIPVDTQNELEKRIVVCNSKEKNDV----------LRSGERKAHGGRRGGGFLAPKR 447

Query: 462 SPFQDIGN--SSLLMKQ-NGGKAIFPLHCHLSSNV 493
           SP +DIGN  SSLLMKQ N GKA+FPL CHLSS+V
Sbjct: 448 SPLRDIGNSSSSLLMKQNNNGKAVFPLRCHLSSDV 482


>Glyma12g02210.1 
          Length = 465

 Score =  518 bits (1333), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 286/451 (63%), Positives = 322/451 (71%), Gaps = 60/451 (13%)

Query: 48  NRLGALFDREKRVPDHKNVPIVLLDHXXXXXXXXXXXXXX-------------------X 88
           NRL AL DRE+R      VPIV+LD+                                  
Sbjct: 43  NRLWALIDRERRA----RVPIVVLDNNNNSSEGERRRERVESRSQSPKGWALEEEKWKFQ 98

Query: 89  XXMLRAECNLLRMEKEIAVKKLERTRAKMERILRSAVRTLVSGRIKICEGKNINMVLDEE 148
             MLRAECNLLRMEKEIAVKKLERTR +ME  LRSA+ TLVSGRIKICEGKN++MVLDEE
Sbjct: 99  AEMLRAECNLLRMEKEIAVKKLERTRVQMETTLRSALHTLVSGRIKICEGKNVDMVLDEE 158

Query: 149 IHALTEKLQKLQKRSLVKDFETRNSRNFDKQVSVLQRRLERIGGPSDEIYLREFEELANV 208
           IH LT KLQ+L +RS VKD   R +RNFDKQVSVLQRRLE+IGG SDEIYLREF+E+ N+
Sbjct: 159 IHELTLKLQRLHRRSKVKDLGARKNRNFDKQVSVLQRRLEQIGGSSDEIYLREFQEMENI 218

Query: 209 SLSIKTSSRFDDSIVASGKLNVEILRRKMEGLSKGILLQRMEEEYXXXXXXXXXXXXXXX 268
           SLSIK SS  DD++VASGKLNVEILRRKMEGLSKGILLQRMEEEY               
Sbjct: 219 SLSIKRSSIVDDNVVASGKLNVEILRRKMEGLSKGILLQRMEEEY--------------- 263

Query: 269 XXXKRVEFQDSSSSIRVPHQEKLSYEGNPCSGHCKSVVRRIVEQVRTETEQWSQMQEMLG 328
                       +S+       L+  GNPCSGHCK+VVRRIVEQVRTETEQWSQMQEMLG
Sbjct: 264 ------------NSLLSTASSSLASSGNPCSGHCKTVVRRIVEQVRTETEQWSQMQEMLG 311

Query: 329 QVREEMEELQASRDFWEDRALHSDFQIQSLHNSLQEWRQRALSFESEKNELRAKLSMLSG 388
           +VREEMEELQASRDFWEDRA HSDFQIQSLHN++QEW+++ALS ES+ NEL A+LS+L G
Sbjct: 312 KVREEMEELQASRDFWEDRARHSDFQIQSLHNAVQEWKEKALSSESKTNELEAELSVLRG 371

Query: 389 DLERLRKEQNSVQGSKCSSIPLDTQNEFEKRVVVCCSKENNSIVTENSKHNEGMRNGERK 448
           D   LRKEQ + +G KCS  P+DTQNE EKR+VVC SKE N  VTENSKHN    +  RK
Sbjct: 372 D---LRKEQTAAKGIKCSPTPVDTQNELEKRIVVCSSKEKNK-VTENSKHN----DVSRK 423

Query: 449 AHAGRG--GFQAPKRSPFQDIGNSSLLMKQN 477
           AH GRG  G   PKRSP +DIGNSSLL+ QN
Sbjct: 424 AHGGRGGDGLLVPKRSPLRDIGNSSLLITQN 454


>Glyma17g30850.1 
          Length = 223

 Score =  207 bits (527), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 107/153 (69%), Positives = 120/153 (78%)

Query: 128 LVSGRIKICEGKNINMVLDEEIHALTEKLQKLQKRSLVKDFETRNSRNFDKQVSVLQRRL 187
           L  GRIKICEGKN++MVLDEEIH LT KLQ+L +RS VKD   R +RNFDKQVSVLQRRL
Sbjct: 16  LFLGRIKICEGKNVDMVLDEEIHELTLKLQRLHRRSKVKDLGARKNRNFDKQVSVLQRRL 75

Query: 188 ERIGGPSDEIYLREFEELANVSLSIKTSSRFDDSIVASGKLNVEILRRKMEGLSKGILLQ 247
           E+IGG SDEIYLREF+E+ N+SLSIK SS  DD++VASGKLNVEILRRKMEGLSKGILLQ
Sbjct: 76  EQIGGSSDEIYLREFQEMENISLSIKRSSIADDNVVASGKLNVEILRRKMEGLSKGILLQ 135

Query: 248 RMEEEYXXXXXXXXXXXXXXXXXXKRVEFQDSS 280
           RMEEEY                  KR+E+QDSS
Sbjct: 136 RMEEEYNSVLSTASNSLASSGSNSKRLEYQDSS 168


>Glyma06g22090.1 
          Length = 196

 Score =  194 bits (494), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 98/123 (79%), Positives = 109/123 (88%)

Query: 131 GRIKICEGKNINMVLDEEIHALTEKLQKLQKRSLVKDFETRNSRNFDKQVSVLQRRLERI 190
           GRIKICEGKN++MVLDEEIH LT KLQ+L +RS VKD   R +RNFDKQVSVLQRRLE+I
Sbjct: 1   GRIKICEGKNVDMVLDEEIHELTLKLQRLHRRSKVKDLGARKNRNFDKQVSVLQRRLEQI 60

Query: 191 GGPSDEIYLREFEELANVSLSIKTSSRFDDSIVASGKLNVEILRRKMEGLSKGILLQRME 250
           GG SDEI LREF+E+ N+SLSIK SS  DD++VASGKLNVEILRRKMEGLSKGILLQRME
Sbjct: 61  GGSSDEICLREFQEMENISLSIKRSSIVDDNVVASGKLNVEILRRKMEGLSKGILLQRME 120

Query: 251 EEY 253
           EEY
Sbjct: 121 EEY 123


>Glyma01g10180.1 
          Length = 219

 Score =  161 bits (407), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/172 (55%), Positives = 113/172 (65%), Gaps = 39/172 (22%)

Query: 315 TETEQWSQMQEMLGQVREEMEELQASRDFWEDRALHSDFQIQSLHNSLQEWRQRALSFES 374
           TETEQWSQMQEMLG VREEMEELQASRDFWEDRA HSDFQIQSLHN++QEW+++ LS E+
Sbjct: 74  TETEQWSQMQEMLGNVREEMEELQASRDFWEDRARHSDFQIQSLHNAVQEWKEKTLSSEN 133

Query: 375 EKNELRAKLSMLSGDLERLRKEQNSVQGSKCS---SIPLDTQ---NEFEKRVVVCCSKEN 428
           + NE+                     +G++CS    + +++    NE EKR+VVC SKE 
Sbjct: 134 KTNEIE--------------------EGTECSKRDQMFINSHGHTNELEKRIVVCNSKEK 173

Query: 429 NSIVTENSKHNEGMRNGERKAHAGR--GGFQAPKRSPFQDIGN-SSLLMKQN 477
           N            +R+GERK H  R  GGF A KRSP QDIGN SSLLMKQN
Sbjct: 174 NDF----------LRSGERKGHGCRRGGGFLALKRSPLQDIGNSSSLLMKQN 215


>Glyma04g27630.1 
          Length = 281

 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/36 (75%), Positives = 29/36 (80%)

Query: 91  MLRAECNLLRMEKEIAVKKLERTRAKMERILRSAVR 126
           MLRAECNLLR EKEIAVKKLERTR +ME +  S  R
Sbjct: 137 MLRAECNLLRKEKEIAVKKLERTRVQMETMFLSWKR 172