Miyakogusa Predicted Gene
- Lj3g3v3599420.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3599420.1 Non Chatacterized Hit- tr|D8S652|D8S652_SELML
Putative uncharacterized protein OS=Selaginella
moelle,40.88,9e-19,seg,NULL,CUFF.46118.1
(154 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma19g31060.1 237 3e-63
Glyma11g10030.1 233 8e-62
Glyma12g02380.1 140 6e-34
>Glyma19g31060.1
Length = 474
Score = 237 bits (605), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 116/153 (75%), Positives = 127/153 (83%)
Query: 1 MQRAMAFAFGPSKVVAPGFATSGIKTSGVLKTAVSTEKIRAVTHSVIASAEKTSISAMRT 60
MQ+ +AFAFGPSKVVAPG ATSG KTSG++K AVSTEKIRAV HSVIASA K SIS MR
Sbjct: 322 MQKVLAFAFGPSKVVAPGIATSGAKTSGIMKAAVSTEKIRAVAHSVIASAGKNSISVMRR 381
Query: 61 TFYEIMRKRKVRPIGFLPWATFAGSVXXXXXXXXXXDGIECAIESLPAAPSIASLGRGIQ 120
FYEIM KRKV+P+GFLPWAT AG + DGIECA+ESLPAAPSIASLGRGIQ
Sbjct: 382 AFYEIMGKRKVQPVGFLPWATLAGCIGTSSGLLLYGDGIECAVESLPAAPSIASLGRGIQ 441
Query: 121 HLREASQAVMKTEGTRIQGSIESLVNRIKKARD 153
HL EASQAVM+TEG+RIQ SIESL+ RIKKARD
Sbjct: 442 HLHEASQAVMQTEGSRIQASIESLIKRIKKARD 474
>Glyma11g10030.1
Length = 620
Score = 233 bits (593), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 112/148 (75%), Positives = 123/148 (83%)
Query: 1 MQRAMAFAFGPSKVVAPGFATSGIKTSGVLKTAVSTEKIRAVTHSVIASAEKTSISAMRT 60
MQ+ +AFAFGPSKV APG ATSG+KTSG++K A S EKIRAV H VIASAEKTSIS MRT
Sbjct: 473 MQKVLAFAFGPSKVAAPGIATSGVKTSGIMKAAASAEKIRAVAHGVIASAEKTSISVMRT 532
Query: 61 TFYEIMRKRKVRPIGFLPWATFAGSVXXXXXXXXXXDGIECAIESLPAAPSIASLGRGIQ 120
FYEIMRKRKVRP+GFLPWATFAGS+ DGIECA+ESLPAAPSIASLGRGIQ
Sbjct: 533 AFYEIMRKRKVRPVGFLPWATFAGSIGTCTSLLLYGDGIECAVESLPAAPSIASLGRGIQ 592
Query: 121 HLREASQAVMKTEGTRIQGSIESLVNRI 148
HL EASQAV + EG+RIQ SIESL+ RI
Sbjct: 593 HLHEASQAVRQMEGSRIQASIESLIKRI 620
>Glyma12g02380.1
Length = 928
Score = 140 bits (352), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/138 (53%), Positives = 84/138 (60%), Gaps = 35/138 (25%)
Query: 1 MQRAMAFAFGPSKVVAPGFATSGIKTSGVLKTAVSTEKIRAVTHSVIASAEKTSISAMRT 60
MQ+ +AFAFG KVVAPG ATSG KTSG++K A
Sbjct: 756 MQKVLAFAFGHYKVVAPGIATSGAKTSGIMKAA--------------------------- 788
Query: 61 TFYEIMRKRKVRPIGFLPWATFAGSVXXXXXXXXXXDGIECAIESLPAAPSIASLGRGIQ 120
RKV+P+GFLPWATFAGS+ DGIECA+ESLPAAPSIASLGRGIQ
Sbjct: 789 --------RKVQPVGFLPWATFAGSIGTCTSLLLYGDGIECAVESLPAAPSIASLGRGIQ 840
Query: 121 HLREASQAVMKTEGTRIQ 138
HL EASQAV +TEG+RI
Sbjct: 841 HLHEASQAVRQTEGSRIH 858