Miyakogusa Predicted Gene

Lj3g3v3599420.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3599420.1 Non Chatacterized Hit- tr|D8S652|D8S652_SELML
Putative uncharacterized protein OS=Selaginella
moelle,40.88,9e-19,seg,NULL,CUFF.46118.1
         (154 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g31060.1                                                       237   3e-63
Glyma11g10030.1                                                       233   8e-62
Glyma12g02380.1                                                       140   6e-34

>Glyma19g31060.1 
          Length = 474

 Score =  237 bits (605), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 116/153 (75%), Positives = 127/153 (83%)

Query: 1   MQRAMAFAFGPSKVVAPGFATSGIKTSGVLKTAVSTEKIRAVTHSVIASAEKTSISAMRT 60
           MQ+ +AFAFGPSKVVAPG ATSG KTSG++K AVSTEKIRAV HSVIASA K SIS MR 
Sbjct: 322 MQKVLAFAFGPSKVVAPGIATSGAKTSGIMKAAVSTEKIRAVAHSVIASAGKNSISVMRR 381

Query: 61  TFYEIMRKRKVRPIGFLPWATFAGSVXXXXXXXXXXDGIECAIESLPAAPSIASLGRGIQ 120
            FYEIM KRKV+P+GFLPWAT AG +          DGIECA+ESLPAAPSIASLGRGIQ
Sbjct: 382 AFYEIMGKRKVQPVGFLPWATLAGCIGTSSGLLLYGDGIECAVESLPAAPSIASLGRGIQ 441

Query: 121 HLREASQAVMKTEGTRIQGSIESLVNRIKKARD 153
           HL EASQAVM+TEG+RIQ SIESL+ RIKKARD
Sbjct: 442 HLHEASQAVMQTEGSRIQASIESLIKRIKKARD 474


>Glyma11g10030.1 
          Length = 620

 Score =  233 bits (593), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 112/148 (75%), Positives = 123/148 (83%)

Query: 1   MQRAMAFAFGPSKVVAPGFATSGIKTSGVLKTAVSTEKIRAVTHSVIASAEKTSISAMRT 60
           MQ+ +AFAFGPSKV APG ATSG+KTSG++K A S EKIRAV H VIASAEKTSIS MRT
Sbjct: 473 MQKVLAFAFGPSKVAAPGIATSGVKTSGIMKAAASAEKIRAVAHGVIASAEKTSISVMRT 532

Query: 61  TFYEIMRKRKVRPIGFLPWATFAGSVXXXXXXXXXXDGIECAIESLPAAPSIASLGRGIQ 120
            FYEIMRKRKVRP+GFLPWATFAGS+          DGIECA+ESLPAAPSIASLGRGIQ
Sbjct: 533 AFYEIMRKRKVRPVGFLPWATFAGSIGTCTSLLLYGDGIECAVESLPAAPSIASLGRGIQ 592

Query: 121 HLREASQAVMKTEGTRIQGSIESLVNRI 148
           HL EASQAV + EG+RIQ SIESL+ RI
Sbjct: 593 HLHEASQAVRQMEGSRIQASIESLIKRI 620


>Glyma12g02380.1 
          Length = 928

 Score =  140 bits (352), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 74/138 (53%), Positives = 84/138 (60%), Gaps = 35/138 (25%)

Query: 1   MQRAMAFAFGPSKVVAPGFATSGIKTSGVLKTAVSTEKIRAVTHSVIASAEKTSISAMRT 60
           MQ+ +AFAFG  KVVAPG ATSG KTSG++K A                           
Sbjct: 756 MQKVLAFAFGHYKVVAPGIATSGAKTSGIMKAA--------------------------- 788

Query: 61  TFYEIMRKRKVRPIGFLPWATFAGSVXXXXXXXXXXDGIECAIESLPAAPSIASLGRGIQ 120
                   RKV+P+GFLPWATFAGS+          DGIECA+ESLPAAPSIASLGRGIQ
Sbjct: 789 --------RKVQPVGFLPWATFAGSIGTCTSLLLYGDGIECAVESLPAAPSIASLGRGIQ 840

Query: 121 HLREASQAVMKTEGTRIQ 138
           HL EASQAV +TEG+RI 
Sbjct: 841 HLHEASQAVRQTEGSRIH 858