Miyakogusa Predicted Gene
- Lj3g3v3579340.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3579340.2 Non Chatacterized Hit- tr|I1INV3|I1INV3_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,34.78,0.0000000007,FYVE/PHD zinc finger,Zinc finger,
FYVE/PHD-type; no description,Zinc finger, RING/FYVE/PHD-type;
seg,CUFF.46012.2
(187 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma12g02470.2 241 3e-64
Glyma12g02470.1 238 3e-63
Glyma11g10150.2 140 7e-34
Glyma11g10150.1 140 7e-34
Glyma11g19530.1 52 3e-07
Glyma12g08950.1 50 1e-06
Glyma12g30530.1 48 6e-06
Glyma17g05400.1 48 6e-06
>Glyma12g02470.2
Length = 1633
Score = 241 bits (616), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 129/191 (67%), Positives = 146/191 (76%), Gaps = 7/191 (3%)
Query: 1 MKSQMIGGRKKGTQSKKNVGRXXXXXXXXXXVTCQKSMET-GKWKKL-VVTSKRKRTGY- 57
M+SQ+ GG KKG KKNVGR V QKS ET G++KK V T+++KRT
Sbjct: 1446 MQSQLNGGHKKG---KKNVGRKKGKQGKTKKVIPQKSKETTGQYKKSEVTTARKKRTKIC 1502
Query: 58 -SYWLNGLWLSRKPNDERVMLFKEKKHVVSSKDFSGSRDRPKCCLCCGDGCTLNYIACEI 116
SYWLNGL LSRKPNDERVMLFKEKK V SSKDFSGS D PKCCLCCG+ CTLNYIACEI
Sbjct: 1503 NSYWLNGLQLSRKPNDERVMLFKEKKRVASSKDFSGSLDHPKCCLCCGNECTLNYIACEI 1562
Query: 117 CGEWFHGDAFGLTVENVGQLIGFRCHVCRDRDAPICPHMNSSALSLPKNNAANGSAEELS 176
CG+WFHGDAFGL VEN QLIGF+CHVC DR APICPH+ +ALS ++NAA EELS
Sbjct: 1563 CGDWFHGDAFGLNVENARQLIGFKCHVCLDRTAPICPHLKVNALSCTESNAAIECGEELS 1622
Query: 177 SPVSLQPVNEV 187
+PVSLQP++EV
Sbjct: 1623 NPVSLQPLSEV 1633
>Glyma12g02470.1
Length = 1649
Score = 238 bits (606), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/189 (67%), Positives = 144/189 (76%), Gaps = 7/189 (3%)
Query: 1 MKSQMIGGRKKGTQSKKNVGRXXXXXXXXXXVTCQKSMET-GKWKKL-VVTSKRKRTGY- 57
M+SQ+ GG KKG KKNVGR V QKS ET G++KK V T+++KRT
Sbjct: 1446 MQSQLNGGHKKG---KKNVGRKKGKQGKTKKVIPQKSKETTGQYKKSEVTTARKKRTKIC 1502
Query: 58 -SYWLNGLWLSRKPNDERVMLFKEKKHVVSSKDFSGSRDRPKCCLCCGDGCTLNYIACEI 116
SYWLNGL LSRKPNDERVMLFKEKK V SSKDFSGS D PKCCLCCG+ CTLNYIACEI
Sbjct: 1503 NSYWLNGLQLSRKPNDERVMLFKEKKRVASSKDFSGSLDHPKCCLCCGNECTLNYIACEI 1562
Query: 117 CGEWFHGDAFGLTVENVGQLIGFRCHVCRDRDAPICPHMNSSALSLPKNNAANGSAEELS 176
CG+WFHGDAFGL VEN QLIGF+CHVC DR APICPH+ +ALS ++NAA EELS
Sbjct: 1563 CGDWFHGDAFGLNVENARQLIGFKCHVCLDRTAPICPHLKVNALSCTESNAAIECGEELS 1622
Query: 177 SPVSLQPVN 185
+PVSLQP++
Sbjct: 1623 NPVSLQPLS 1631
>Glyma11g10150.2
Length = 1605
Score = 140 bits (353), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/144 (58%), Positives = 94/144 (65%), Gaps = 25/144 (17%)
Query: 1 MKSQMIGGRKKGTQSKKNVGRXXXXXXXXXXVTCQKSMETGKWKKLVVTS---KRKRTGY 57
M SQ+ GG KKG +KKNVGR +K ++ KKL VT+ KR RT
Sbjct: 1470 MHSQLNGGHKKGKSTKKNVGR-------------KKGKQSQTKKKLPVTTAHKKRTRTCN 1516
Query: 58 SYWLNGLWLSRKPNDERVMLFKEKKHVVSSKDFSGSRDRPKCCLCCGDGCTLNYIACEIC 117
SYWLNGL LSRK NDERVMLFKEKK VVSS+DFSGS D PKCCLCCG+ CTLNYIACEIC
Sbjct: 1517 SYWLNGLQLSRKSNDERVMLFKEKKCVVSSEDFSGSVDYPKCCLCCGNECTLNYIACEIC 1576
Query: 118 GEWFHGDAFGLTVENVGQLIGFRC 141
G GD F N L+ +RC
Sbjct: 1577 G----GDYF-----NSYLLVSWRC 1591
>Glyma11g10150.1
Length = 1605
Score = 140 bits (353), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/144 (58%), Positives = 94/144 (65%), Gaps = 25/144 (17%)
Query: 1 MKSQMIGGRKKGTQSKKNVGRXXXXXXXXXXVTCQKSMETGKWKKLVVTS---KRKRTGY 57
M SQ+ GG KKG +KKNVGR +K ++ KKL VT+ KR RT
Sbjct: 1470 MHSQLNGGHKKGKSTKKNVGR-------------KKGKQSQTKKKLPVTTAHKKRTRTCN 1516
Query: 58 SYWLNGLWLSRKPNDERVMLFKEKKHVVSSKDFSGSRDRPKCCLCCGDGCTLNYIACEIC 117
SYWLNGL LSRK NDERVMLFKEKK VVSS+DFSGS D PKCCLCCG+ CTLNYIACEIC
Sbjct: 1517 SYWLNGLQLSRKSNDERVMLFKEKKCVVSSEDFSGSVDYPKCCLCCGNECTLNYIACEIC 1576
Query: 118 GEWFHGDAFGLTVENVGQLIGFRC 141
G GD F N L+ +RC
Sbjct: 1577 G----GDYF-----NSYLLVSWRC 1591
>Glyma11g19530.1
Length = 1360
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 96 RPKCCLCCGDGCT-LNYIACEICGEWFHGDAFGLTVENVGQLIGFRCHVCRDRDAPICPH 154
+P C LC + L YI CE C W+H +A L + ++GF+C CR +P+CP+
Sbjct: 1071 KPVCHLCRKPYMSDLTYICCETCQNWYHAEAVELEESKISSVLGFKCSKCRRIKSPVCPY 1130
>Glyma12g08950.1
Length = 1429
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 96 RPKCCLCCGDGCT-LNYIACEICGEWFHGDAFGLTVENVGQLIGFRCHVCRDRDAPICPH 154
+P C LC + L YI CE C W+H +A L + ++GF+C CR +P+CP+
Sbjct: 1070 KPVCHLCRKPYMSDLTYICCETCRNWYHAEAVELEESKISSVLGFKCCKCRRIKSPVCPY 1129
>Glyma12g30530.1
Length = 1503
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 109 LNYIACEICGEWFHGDAFGLTVENVGQLIGFRCHVCRDRDAPICPH 154
L YI CE C W+H +A L + ++GF+C CR +P+CP+
Sbjct: 1194 LMYICCETCKHWYHAEAVELEESKLFDVLGFKCCKCRRIKSPVCPY 1239
>Glyma17g05400.1
Length = 1410
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 109 LNYIACEICGEWFHGDAFGLTVENVGQLIGFRCHVCRDRDAPICPH 154
L YI CE C W+H +A L + ++GF+C CR +P+CP+
Sbjct: 1102 LMYICCETCKHWYHAEAVELEESKLFDVLGFKCCKCRRIKSPVCPY 1147