Miyakogusa Predicted Gene

Lj3g3v3527570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3527570.1 tr|Q9SD22|Q9SD22_ARATH AT3g51250/F24M12_290
OS=Arabidopsis thaliana GN=F24M12.290 PE=2
SV=1,69.44,4e-19,Senescence,Senescence/spartin-associated; GB DEF:
PUTATIVE SENESCENCE-ASSOCIATED PROTEIN,NULL; FAMIL,CUFF.45958.1
         (72 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g11430.1                                                        80   6e-16
Glyma02g05230.1                                                        75   1e-14
Glyma11g08300.1                                                        73   9e-14
Glyma01g36960.1                                                        72   1e-13
Glyma16g23400.1                                                        67   3e-12

>Glyma11g11430.1 
          Length = 431

 Score = 79.7 bits (195), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/43 (88%), Positives = 38/43 (88%)

Query: 14  HKYGEEAAQVTNEGLDAAGHAIGTAWTVFKLRKALNPKRVIKP 56
           HKYGEEAA VTNEGLDAAGHAIGTAW VFKL KALNPK  IKP
Sbjct: 370 HKYGEEAAHVTNEGLDAAGHAIGTAWAVFKLGKALNPKSAIKP 412


>Glyma02g05230.1 
          Length = 461

 Score = 75.1 bits (183), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/43 (74%), Positives = 38/43 (88%)

Query: 14  HKYGEEAAQVTNEGLDAAGHAIGTAWTVFKLRKALNPKRVIKP 56
           H+YGEEAA+ T+EGLDAAGHA+GTAW  FK+R+ LNPK VIKP
Sbjct: 398 HRYGEEAAKATSEGLDAAGHAVGTAWAAFKIRQVLNPKSVIKP 440


>Glyma11g08300.1 
          Length = 447

 Score = 72.8 bits (177), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 30/43 (69%), Positives = 37/43 (86%)

Query: 14  HKYGEEAAQVTNEGLDAAGHAIGTAWTVFKLRKALNPKRVIKP 56
           H+YGE+AA+ T+EG  AAGHA+GTAW  FK+RKALNPK V+KP
Sbjct: 384 HRYGEQAAEATSEGFSAAGHALGTAWAAFKIRKALNPKSVLKP 426


>Glyma01g36960.1 
          Length = 448

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/43 (69%), Positives = 37/43 (86%)

Query: 14  HKYGEEAAQVTNEGLDAAGHAIGTAWTVFKLRKALNPKRVIKP 56
           H+YGE+AA+ T+EG  AAGHA+GTAW  FK+RKALNPK V+KP
Sbjct: 385 HRYGEQAAEATSEGFSAAGHALGTAWAAFKIRKALNPKSVLKP 427


>Glyma16g23400.1 
          Length = 453

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/44 (70%), Positives = 38/44 (86%), Gaps = 1/44 (2%)

Query: 14  HKYGEEAAQVTNEGLDAAGHAIGTAWTVFKLRKALNPK-RVIKP 56
           H+YGEEAA+ T+EGLDAAGHA+GTAW  FK+ +ALNPK  V+KP
Sbjct: 389 HRYGEEAAKATSEGLDAAGHAVGTAWAAFKIPQALNPKSSVLKP 432