Miyakogusa Predicted Gene

Lj3g3v3527150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3527150.1 tr|G7KK50|G7KK50_MEDTR Alanyl-tRNA synthetase
(Fragment) OS=Medicago truncatula GN=MTR_6g045600 PE=3,92.76,0,Class
II aaRS and biotin synthetases,NULL; AA_TRNA_LIGASE_II_ALA,Alanyl-tRNA
synthetase, class IIc, ,CUFF.46379.1
         (334 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g10860.1                                                       575   e-164
Glyma12g03140.1                                                       561   e-160
Glyma06g00330.1                                                       214   1e-55
Glyma04g00280.1                                                       186   3e-47

>Glyma11g10860.1 
          Length = 950

 Score =  575 bits (1482), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 265/290 (91%), Positives = 276/290 (95%), Gaps = 1/290 (0%)

Query: 44  MPGPDALDLEWPAKRVRDTFVNFFKESKNHVYWQSSPVVPFNDPTLLFANAGMNQFKPIF 103
           MP  +  D+EWPAKRVRDTF++FF++ KNHV W+SSPVVPFNDPTLLFANAGMNQFKPIF
Sbjct: 1   MPETETHDVEWPAKRVRDTFISFFQD-KNHVNWKSSPVVPFNDPTLLFANAGMNQFKPIF 59

Query: 104 LGTADPNTDLSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKTE 163
           LGTADPNT LSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK E
Sbjct: 60  LGTADPNTALSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKVE 119

Query: 164 AIGWAWELLTKVYKLPSDRIYATYFGGDEKAGLAPDTEARDIWLQFLPPGRVLPFGCKDN 223
           AI WAWELLTKVYKLPSDRIYATYFGGD+K+GLAPD EARDIWL+FLPPGRVLPF CKDN
Sbjct: 120 AISWAWELLTKVYKLPSDRIYATYFGGDDKSGLAPDLEARDIWLKFLPPGRVLPFDCKDN 179

Query: 224 FWEMGDTGPCGPCTEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREADGSLKSLP 283
           FWEMGDTGPCGPCTEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREADGSLK LP
Sbjct: 180 FWEMGDTGPCGPCTEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREADGSLKPLP 239

Query: 284 AKHVDTGMGFERLTSILQNKMSNYDTDVFLPIFDAIQLATGARPYSGKVG 333
           AKHVDTGMGFERLTSILQ+KMSNYDTDVFLPIFD IQ ATGARPYSGKVG
Sbjct: 240 AKHVDTGMGFERLTSILQDKMSNYDTDVFLPIFDVIQRATGARPYSGKVG 289


>Glyma12g03140.1 
          Length = 964

 Score =  561 bits (1447), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 259/290 (89%), Positives = 272/290 (93%), Gaps = 1/290 (0%)

Query: 44  MPGPDALDLEWPAKRVRDTFVNFFKESKNHVYWQSSPVVPFNDPTLLFANAGMNQFKPIF 103
           MPG +  D+EWPAKRVRDTF +FF++ KNHV W+SSPVVPFNDPTLLF NAGMNQFKPIF
Sbjct: 1   MPGAETHDVEWPAKRVRDTFFSFFQD-KNHVNWKSSPVVPFNDPTLLFVNAGMNQFKPIF 59

Query: 104 LGTADPNTDLSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKTE 163
           LGTADPNT LSKLSRA NTQKCIRAG KHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK E
Sbjct: 60  LGTADPNTGLSKLSRAFNTQKCIRAGSKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKVE 119

Query: 164 AIGWAWELLTKVYKLPSDRIYATYFGGDEKAGLAPDTEARDIWLQFLPPGRVLPFGCKDN 223
           AI WAW+LLTKVYKLPSD IYATYFGGD+K+GLAPD EARDIWL+FLPPGRVLPFGCKDN
Sbjct: 120 AISWAWDLLTKVYKLPSDCIYATYFGGDDKSGLAPDLEARDIWLKFLPPGRVLPFGCKDN 179

Query: 224 FWEMGDTGPCGPCTEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREADGSLKSLP 283
           FWEMGDTGPCGPCTEIHFDRIGNRDAASLVNNDDPTC+EIWNLVFIQFNREADGSLK LP
Sbjct: 180 FWEMGDTGPCGPCTEIHFDRIGNRDAASLVNNDDPTCVEIWNLVFIQFNREADGSLKPLP 239

Query: 284 AKHVDTGMGFERLTSILQNKMSNYDTDVFLPIFDAIQLATGARPYSGKVG 333
           AKHVD G+GFERLTSILQ+KMSNYDTDVFLPIFD IQ ATGARPYSGKVG
Sbjct: 240 AKHVDMGLGFERLTSILQDKMSNYDTDVFLPIFDVIQWATGARPYSGKVG 289


>Glyma06g00330.1 
          Length = 980

 Score =  214 bits (544), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 115/261 (44%), Positives = 157/261 (60%), Gaps = 21/261 (8%)

Query: 59  VRDTFVNFFKESKNHVYWQSSPVVPFNDPTLLFANAGMNQFKPIFLGTADPNTDLSKLSR 118
           +R  F+NF+  S+ H    S+ +VP +DPT+L   AGM QFKPIFLG         ++  
Sbjct: 86  IRQRFLNFYA-SRGHKVLPSASLVP-DDPTVLLTIAGMLQFKPIFLGKIP-----RQVPC 138

Query: 119 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKTEAIGWAWELLTKVYKL 178
           A   Q+CIR     ND+ +VG    H TFFEMLGN+SFG YFK +AI WAWEL T  + L
Sbjct: 139 AATAQRCIRT----NDIHNVGLTARHQTFFEMLGNFSFGHYFKKQAILWAWELSTAEFGL 194

Query: 179 PSDRIYATYFGGDEKAGLAPDTEARDIWLQFL--PPGRVLPFGCKDNFWEMGDTGPCGPC 236
           P DR++ + +  D+        EA  +W   +  P  R+   G +DNFW  G TGPCGPC
Sbjct: 195 PPDRLWISVYEDDD--------EAFQLWSHEVGVPVERIKRLGEEDNFWTSGVTGPCGPC 246

Query: 237 TEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREADGSLKSLPAKHVDTGMGFERL 296
           +EI++D    R       NDD   IE +NLVF+Q+N++ DGSL+ L  K++DTG+G ER+
Sbjct: 247 SEIYYDFYPERGYVDADLNDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERM 306

Query: 297 TSILQNKMSNYDTDVFLPIFD 317
             ILQ   +NY+TD+  PI +
Sbjct: 307 ARILQKVPNNYETDLIFPIIE 327


>Glyma04g00280.1 
          Length = 860

 Score =  186 bits (472), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 99/224 (44%), Positives = 133/224 (59%), Gaps = 19/224 (8%)

Query: 96  MNQFKPIFLGTADPNTDLSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 155
           M QFKPIFLG         ++  A   Q+CIR     ND+ +VG    H TFFEMLGN+S
Sbjct: 1   MLQFKPIFLGKVP-----RQVPCAATAQRCIRT----NDIHNVGLTARHQTFFEMLGNFS 51

Query: 156 FGDYFKTEAIGWAWELLTKVYKLPSDRIYATYFGGDEKAGLAPDTEARDIWLQFL--PPG 213
           FG YFK +AI WAWEL T  + LP DR++ + +  D+        EA  +W   +  P  
Sbjct: 52  FGHYFKKQAILWAWELSTAEFGLPPDRLWISVYEDDD--------EAFQLWSDEVGVPVE 103

Query: 214 RVLPFGCKDNFWEMGDTGPCGPCTEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNR 273
           R+   G +DNFW  G TGPCGPC+EI++D    R       NDD   IE +NLVF+Q+N+
Sbjct: 104 RIKRLGEEDNFWTSGVTGPCGPCSEIYYDFHPERGYVDADLNDDTRFIEFYNLVFMQYNK 163

Query: 274 EADGSLKSLPAKHVDTGMGFERLTSILQNKMSNYDTDVFLPIFD 317
           + D SL+ L  K++DTG+G ER+  ILQ   +NY+TD+  PI +
Sbjct: 164 KDDSSLEPLKQKNIDTGLGLERMARILQKVPNNYETDLIFPIIE 207