Miyakogusa Predicted Gene

Lj3g3v3500210.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3500210.1 CUFF.45873.1
         (244 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g03340.1                                                       238   5e-63
Glyma11g11150.1                                                       125   4e-29

>Glyma12g03340.1 
          Length = 286

 Score =  238 bits (607), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 136/240 (56%), Positives = 161/240 (67%), Gaps = 10/240 (4%)

Query: 3   SKRQLPSWMMQKVDAS--HVNKSENVAETNCSKENGDIVIENVTKKDQKKETSRSKSNLN 60
           SKRQLP WMMQKV A+  HV+ S N  ETNC  + GDI+  N TKKD K E+S+  SNL 
Sbjct: 8   SKRQLPPWMMQKVGATATHVSDSNNAVETNCYIKKGDIIKTNATKKDHKSESSKRNSNLR 67

Query: 61  ARREVKRRRNLDQQDGSDDNVTQKKKKRKGNRSRDRVLRSLKKKDQNLEDLSHGNDDDDV 120
           A+ EV  R+ LDQQDGS D VTQ  KKRKG+RS+DR  RS  KK + LED SHG      
Sbjct: 68  AKCEVMGRKKLDQQDGSSDKVTQ--KKRKGDRSKDRDQRSSIKKRKKLEDPSHG-----C 120

Query: 121 YRVQVSDDDDMELTVEDLVAIAEQYVKDHESKERQE-ASKQCESNWQFSASTETGTTRGA 179
           Y V    DD M+LT+EDL+AIAEQYVKD+E+K+R+E +S+Q ES WQF  + ETG T  +
Sbjct: 121 YDVSPVSDDAMDLTLEDLMAIAEQYVKDYENKDRKEISSRQHESKWQFQVTNETGHTLDS 180

Query: 180 LCXXXXXXXXXXXXLYNSAPTTGELIGTSSSYTDHPALDMLDVFLGPLFRTTLEKEKSKS 239
            C            L +   TTGELI TS+S T  PA DMLD+FLGPL R TLEKEKSKS
Sbjct: 181 PCKNENSSKSGREDLSHFTSTTGELIATSTSQTGDPAQDMLDLFLGPLLRKTLEKEKSKS 240


>Glyma11g11150.1 
          Length = 156

 Score =  125 bits (314), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 67/113 (59%), Positives = 79/113 (69%), Gaps = 1/113 (0%)

Query: 131 MELTVEDLVAIAEQYVKDHESKERQE-ASKQCESNWQFSASTETGTTRGALCXXXXXXXX 189
           M+LTVEDL+AIAEQYVKD+E+K+R+E +S+Q ES WQF  + ETGTT  + C        
Sbjct: 1   MDLTVEDLMAIAEQYVKDYENKDRKERSSRQRESKWQFQDTNETGTTLDSSCENRISSGS 60

Query: 190 XXXXLYNSAPTTGELIGTSSSYTDHPALDMLDVFLGPLFRTTLEKEKSKSTQE 242
               L NS  TTGELI TS+S T  PA DMLD+FLGPL R TLEKEK KS  E
Sbjct: 61  GREDLSNSTSTTGELIATSTSQTGDPAQDMLDLFLGPLLRKTLEKEKIKSVVE 113