Miyakogusa Predicted Gene

Lj3g3v3430220.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3430220.1 tr|D7M1Q8|D7M1Q8_ARALL Protein binding protein
OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT_910,31.3,0.000004,RNI-like,NULL; EBF1 (EIN3-BINDING F
BOX PROTEIN 1), UBIQUITIN-PROTEIN LIGASE,NULL; F-BOX/LEUCINE
RIC,NODE_22983_length_1804_cov_27.210644.path2.1
         (189 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g13930.1                                                       304   3e-83
Glyma06g47600.1                                                       301   2e-82
Glyma12g00910.1                                                       301   3e-82
Glyma09g36420.1                                                       291   2e-79
Glyma18g24000.1                                                        73   1e-13
Glyma13g23510.1                                                        50   2e-06
Glyma04g20330.1                                                        48   5e-06
Glyma07g06600.1                                                        48   7e-06

>Glyma04g13930.1 
          Length = 440

 Score =  304 bits (779), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 144/188 (76%), Positives = 168/188 (89%), Gaps = 1/188 (0%)

Query: 1   MLEELIVVDHRMVGGWLAGLSFCENLKTLRFQSCKAIDGNPGMEEHLGFCPALERLHLQK 60
           MLEEL++VDHRM  GWLAG+SFCENLKTLR QSCK IDG+PG+EEHLG C ALER+HLQK
Sbjct: 252 MLEELVIVDHRMDDGWLAGVSFCENLKTLRVQSCKVIDGSPGLEEHLGCCEALERVHLQK 311

Query: 61  CQLRDKNGTGAVFSVCRAAREVILQDCWGLDNSVLSLAIICRRVELCYLEGCSLLTTEGL 120
            Q+RD+NG GA+FSVCR ARE++LQDCWGLD+  LSLA++CRRV+L Y+EGCSLLTTEGL
Sbjct: 312 FQMRDRNGVGALFSVCRNAREIVLQDCWGLDDGTLSLAVVCRRVKLFYVEGCSLLTTEGL 371

Query: 121 ELVIDSWKELQCLRVVSCKNIKDSDISPTLATLFATLKELRWRPDTKHLLSSSLEEISMG 180
           E VI+ WKEL+CLRVVSCKNIKDSDISP LATLF+TLKEL+WRPDTK+L  S +  +SMG
Sbjct: 372 ESVIEHWKELECLRVVSCKNIKDSDISPELATLFSTLKELKWRPDTKYLFPSDV-GVSMG 430

Query: 181 KKGGKFFR 188
           KKGGKFF+
Sbjct: 431 KKGGKFFK 438


>Glyma06g47600.1 
          Length = 465

 Score =  301 bits (772), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 141/188 (75%), Positives = 167/188 (88%), Gaps = 1/188 (0%)

Query: 1   MLEELIVVDHRMVGGWLAGLSFCENLKTLRFQSCKAIDGNPGMEEHLGFCPALERLHLQK 60
           MLEEL++VDHRM  GWLAG+S+CENLKTLR QSCK IDG+PG+EEHLG C ALER+HL K
Sbjct: 277 MLEELVIVDHRMDDGWLAGVSYCENLKTLRVQSCKVIDGSPGLEEHLGCCEALERVHLHK 336

Query: 61  CQLRDKNGTGAVFSVCRAAREVILQDCWGLDNSVLSLAIICRRVELCYLEGCSLLTTEGL 120
           CQ+RD+N  GA+FSVCR ARE++LQDCWGLD++ LSLA++CRRV+L Y+EGCSLLTTEGL
Sbjct: 337 CQVRDRNAVGALFSVCRNAREIVLQDCWGLDDATLSLAVVCRRVKLFYVEGCSLLTTEGL 396

Query: 121 ELVIDSWKELQCLRVVSCKNIKDSDISPTLATLFATLKELRWRPDTKHLLSSSLEEISMG 180
           E VI+ WKEL+CLRV SCKNIKDSDISP LATLF+TLKEL+WRPDTK+L  S +  +SMG
Sbjct: 397 ESVIEHWKELECLRVDSCKNIKDSDISPELATLFSTLKELKWRPDTKYLFESDV-GVSMG 455

Query: 181 KKGGKFFR 188
           KKGGKFF+
Sbjct: 456 KKGGKFFK 463


>Glyma12g00910.1 
          Length = 487

 Score =  301 bits (771), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 144/188 (76%), Positives = 162/188 (86%)

Query: 1   MLEELIVVDHRMVGGWLAGLSFCENLKTLRFQSCKAIDGNPGMEEHLGFCPALERLHLQK 60
           MLEEL   DHRM  GWLA +S+CENLKTLRFQSCK ID NPGMEE+LG CPALERLHLQK
Sbjct: 297 MLEELTFSDHRMDDGWLAAISYCENLKTLRFQSCKKIDPNPGMEEYLGCCPALERLHLQK 356

Query: 61  CQLRDKNGTGAVFSVCRAAREVILQDCWGLDNSVLSLAIICRRVELCYLEGCSLLTTEGL 120
           CQLRD+    A+FSVCRA RE+++QDCWGLDNS+ SLA+IC RV+L YLEGCSLLTTEGL
Sbjct: 357 CQLRDRKSVVALFSVCRAVREIVIQDCWGLDNSMFSLAMICWRVKLLYLEGCSLLTTEGL 416

Query: 121 ELVIDSWKELQCLRVVSCKNIKDSDISPTLATLFATLKELRWRPDTKHLLSSSLEEISMG 180
           E VI SWK+LQ LRVVSCKNIKD++ISP LATLF TLKELRW PDTK LL SS++ I+MG
Sbjct: 417 ESVIHSWKDLQSLRVVSCKNIKDNEISPALATLFTTLKELRWSPDTKSLLPSSVKGITMG 476

Query: 181 KKGGKFFR 188
           KKGGKFF+
Sbjct: 477 KKGGKFFK 484


>Glyma09g36420.1 
          Length = 473

 Score =  291 bits (746), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 141/188 (75%), Positives = 156/188 (82%), Gaps = 4/188 (2%)

Query: 1   MLEELIVVDHRMVGGWLAGLSFCENLKTLRFQSCKAIDGNPGMEEHLGFCPALERLHLQK 60
           MLEEL   DHRM  GWLA +SFCENLKTLRFQSCK ID NPGMEE+LG CPAL+RLHLQK
Sbjct: 287 MLEELTFSDHRMGDGWLAAISFCENLKTLRFQSCKRIDPNPGMEEYLGCCPALDRLHLQK 346

Query: 61  CQLRDKNGTGAVFSVCRAAREVILQDCWGLDNSVLSLAIICRRVELCYLEGCSLLTTEGL 120
           CQLRDK    A+FSVCR  RE+++QDCWGLDNS+ S A+ICRRV+L Y+EGCSLLTTEGL
Sbjct: 347 CQLRDKKSVAALFSVCRVVREIVIQDCWGLDNSIFSFAMICRRVKLLYVEGCSLLTTEGL 406

Query: 121 ELVIDSWKELQCLRVVSCKNIKDSDISPTLATLFATLKELRWRPDTKHLLSSSLEEISMG 180
           E VI SWKELQ LRVV+CKNIKDS+ISP LATLF TLKELRW PDTK LL S +    MG
Sbjct: 407 ECVIHSWKELQSLRVVTCKNIKDSEISPALATLFTTLKELRWSPDTKSLLPSGV----MG 462

Query: 181 KKGGKFFR 188
           KKG KFF+
Sbjct: 463 KKGDKFFK 470


>Glyma18g24000.1 
          Length = 109

 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 51/93 (54%), Gaps = 28/93 (30%)

Query: 1   MLEELIVVDHRMVGGWLAGLSFCENLKTLRFQSCKAIDGNPGMEEHLGFCPALERLHLQK 60
           MLEEL++VDHRM  GWL G+S+CENL          I G   M           R+HLQK
Sbjct: 44  MLEELVIVDHRMDDGWLVGVSYCENL----------ISGALEMYSR-------ARVHLQK 86

Query: 61  CQLRDKNGTGAVFSVCRAAREVILQDCWGLDNS 93
           CQ+RDKN  G +FS           DCWGLD++
Sbjct: 87  CQVRDKNTVGVLFS-----------DCWGLDDA 108


>Glyma13g23510.1 
          Length = 639

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 9/137 (6%)

Query: 15  GWLAGLSFCENLKTLRFQSCKAIDGNPGMEEHLGFCPALERLHLQKCQLRDKNGTGAVFS 74
           G +A    C NL TL  +SC  I GN G++     CP L+ + ++ C L   +G  ++ +
Sbjct: 229 GLIAIAEGCPNLTTLTIESCPNI-GNEGLQATARLCPKLQSISIKDCPLVGDHGVSSLLA 287

Query: 75  VCRAAREVILQDCWGLDNSVLSLAIIC---RRVELCYLEGCSLLTTEGLELV--IDSWKE 129
                  V LQ    L+ +  SLA+IC   + +    L G   +T  G  ++      ++
Sbjct: 288 SASNLSRVKLQT---LNITDFSLAVICHYGKAITNLVLSGLKNVTERGFWVMGAAQGLQK 344

Query: 130 LQCLRVVSCKNIKDSDI 146
           L  L V +C+ + D+ I
Sbjct: 345 LLSLTVTACRGVTDTSI 361


>Glyma04g20330.1 
          Length = 650

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 17/156 (10%)

Query: 1   MLEELIVVDHRMVGG--WLAGLSFCENLKTLRFQSCKAIDGNPGMEEHLGFCPALERLHL 58
           MLE+L +     +     +A    C NL TL  +SC  I GN G++     CP L+ + +
Sbjct: 224 MLEKLDICQASFISNKSLIAIAKGCPNLTTLNIESCPKI-GNEGLQAIARSCPKLQCISI 282

Query: 59  QKCQLRDKNGTGAVFSVCRAAREVILQDCWGLDNSVLSLAIICR------RVELCYLEGC 112
           + C L   +G  ++ S      +V LQD   L+ +  SLA+I         + LC L+  
Sbjct: 283 KDCPLVGDHGVSSLLSSAIHLSKVKLQD---LNITDFSLAVIGHYGKAILNLVLCGLQN- 338

Query: 113 SLLTTEGLEL--VIDSWKELQCLRVVSCKNIKDSDI 146
             +T  G  +  V  S ++L  L V SC+ I D+ I
Sbjct: 339 --VTERGFWVMGVAQSLQKLMSLTVSSCRGITDASI 372


>Glyma07g06600.1 
          Length = 388

 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 11/136 (8%)

Query: 12  MVGGWLAGLSFCENLKTLRFQSCKAIDGNPGMEEHLGFCPALERLHLQKCQLRDKNGTGA 71
           ++G  L G+ F   LK L F+ C+ +     +    G CP LE  +L  C    + G   
Sbjct: 253 VLGDPLPGIGFASCLKILNFRLCRTVSDTSIVAIAKG-CPLLEEWNLALCHEVREPGWRT 311

Query: 72  VFSVCRAAREVILQDCWGL-DNSVLSLAIICRRVELCYLEGCSLLTTEGLELVIDSWKEL 130
           V   CR  + + +  C  L DN + +L   C+ + + YL GC  LT+  LEL        
Sbjct: 312 VGLYCRNLKRLHVNRCRNLCDNGLQALREGCKNLSILYLNGCVRLTSVALEL-------F 364

Query: 131 QCLRVVSCKNIKDSDI 146
           +C R   C  IKD +I
Sbjct: 365 KCQRANVC--IKDIEI 378