Miyakogusa Predicted Gene

Lj3g3v3375930.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3375930.1 tr|Q8S8M3|Q8S8M3_ARATH At2g38780 OS=Arabidopsis
thaliana GN=At2g38780 PE=2 SV=1,52.08,2e-19,
,NODE_59384_length_592_cov_28.959459.path2.1
         (98 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g12160.1                                                       156   5e-39
Glyma12g04370.1                                                       152   9e-38

>Glyma11g12160.1 
          Length = 442

 Score =  156 bits (394), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 76/98 (77%), Positives = 84/98 (85%), Gaps = 1/98 (1%)

Query: 1   MYEKLKSHPNAKVSKKARQFSYSFQAMEMMKFTAGSSSYSKNTYYQNYFDAFIENKSNYP 60
           MYEKLKSHPN KVSKKARQF YSFQAMEMMK T GS  Y KN+ YQNYFDAF+ENKSNYP
Sbjct: 346 MYEKLKSHPNPKVSKKARQFMYSFQAMEMMKMTTGSQFYLKNSDYQNYFDAFVENKSNYP 405

Query: 61  LQDGVAQENAMNLQVLPYIIFMVSPIFVILLIALQKRI 98
             DG  QE+AMN QVLPYI+F+VSPIFV+LLIA++K I
Sbjct: 406 GGDGPVQESAMN-QVLPYILFLVSPIFVVLLIAVRKGI 442


>Glyma12g04370.1 
          Length = 413

 Score =  152 bits (383), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 75/96 (78%), Positives = 85/96 (88%), Gaps = 2/96 (2%)

Query: 1   MYEKLKSHPNAKVSKKARQFSYSFQAMEMMKFTAGSSSYSKNTYYQNYFDAFIENKSNYP 60
           MYEKLKSHPN KVSKKARQF YSFQAMEMMK T GS  Y KN+ YQNYFDAF+ENKSNYP
Sbjct: 318 MYEKLKSHPNPKVSKKARQFMYSFQAMEMMKETTGSQFYLKNSDYQNYFDAFVENKSNYP 377

Query: 61  LQDGVAQENAMNLQVLPYIIFMVSPIFVILLIALQK 96
            +DG+ QE+AMN QVLPYI+F+VSPIFV+LLIA++K
Sbjct: 378 -KDGLVQESAMN-QVLPYILFLVSPIFVVLLIAVRK 411