Miyakogusa Predicted Gene

Lj3g3v3348620.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3348620.1 Non Chatacterized Hit- tr|B8LN85|B8LN85_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,28.74,0.0000000002,seg,NULL,CUFF.45682.1
         (259 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g12560.1                                                       299   2e-81
Glyma12g04770.1                                                       286   2e-77

>Glyma11g12560.1 
          Length = 493

 Score =  299 bits (765), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 166/276 (60%), Positives = 183/276 (66%), Gaps = 24/276 (8%)

Query: 1   MIPTTGVPKKRQRTAATRHXXXXXXXXXXXX----------------XXXXXPSTTTGDA 44
           M P+ GVPKKRQRT A                                    PS    DA
Sbjct: 1   MFPSAGVPKKRQRTTAANRSSSTVGTISSLSDVTLIEISQNPRPSSPMTDDRPSPAAEDA 60

Query: 45  LYFNDASTADIILRLFIDTADSPLESSPSVEDSDLHVYLHSTILRRAKYFSALLSDRWIG 104
           L++NDASTAD++LRLFID A SPL+S   V +SD HVYLHS +LRR+KYFSALLSDRWIG
Sbjct: 61  LHYNDASTADVVLRLFID-APSPLDS---VSNSDHHVYLHSDVLRRSKYFSALLSDRWIG 116

Query: 105 LVHPHTXXXXXXXXXXXDRG-ELFRLNLGVSPTPGSIQNHLTVLELLYTSDFANTVNNAS 163
            V P             DR  +LFRLNLGV+PT GSIQ+HLTVLELLYT+DFA  V+ AS
Sbjct: 117 HVAPE---LSSSSSCNRDRDLDLFRLNLGVAPTGGSIQSHLTVLELLYTNDFAAAVDCAS 173

Query: 164 TAXXXXXXXXXXXXXXCVRWCVAFLEAVPWTEEEENRVVSLIPFLNEEESKELVARVSPV 223
           TA              CVRWCV FLEAVPWTEEEE RVV LIPFL EEESKELVARV P 
Sbjct: 174 TALDLLPVALELLFEDCVRWCVDFLEAVPWTEEEEKRVVRLIPFLREEESKELVARVWPS 233

Query: 224 GEDACEAMLEGLISSAMNNYQNTAFVKAFVGKILRD 259
           GED+CEAML+GLISSAMN+Y NTAFVKAFVGKILRD
Sbjct: 234 GEDSCEAMLQGLISSAMNSYGNTAFVKAFVGKILRD 269


>Glyma12g04770.1 
          Length = 485

 Score =  286 bits (731), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 150/225 (66%), Positives = 169/225 (75%), Gaps = 10/225 (4%)

Query: 37  PSTTTGDALYFNDASTADIILRLFIDTADSPLESSP--SVEDSDLHVYLHSTILRRAKYF 94
           PS    DAL++NDA+TAD++LRLFID A SPL S+   SV +SDLHVYLHS +LRR+KYF
Sbjct: 48  PSPAAEDALHYNDAATADVVLRLFID-ASSPLYSATADSVSNSDLHVYLHSDVLRRSKYF 106

Query: 95  SALLSDRWIGLVHPHTXXXXXXXXXXXDRGELFRLNLGVSPTPGSIQNHLTVLELLYTSD 154
           SALLSDRWIG VH                 +LFRLNLGV+P  GSIQ HL VLELLYT+D
Sbjct: 107 SALLSDRWIGHVH-------SPEHSSSSNRDLFRLNLGVAPAAGSIQLHLIVLELLYTND 159

Query: 155 FANTVNNASTAXXXXXXXXXXXXXXCVRWCVAFLEAVPWTEEEENRVVSLIPFLNEEESK 214
           FA  V++ASTA              CVRWCV FLEAVPWTEEEE RVV LIPFL+E+ESK
Sbjct: 160 FAAAVDSASTALDLLPVALELLFEECVRWCVDFLEAVPWTEEEEKRVVRLIPFLSEKESK 219

Query: 215 ELVARVSPVGEDACEAMLEGLISSAMNNYQNTAFVKAFVGKILRD 259
           ELVARV P GED+CEAML+GLISSAMN+Y NTAFVKAFVGKILRD
Sbjct: 220 ELVARVWPSGEDSCEAMLQGLISSAMNSYGNTAFVKAFVGKILRD 264