Miyakogusa Predicted Gene

Lj3g3v3337430.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3337430.2 tr|A9TTB7|A9TTB7_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_171835,50,6e-18,seg,NULL,CUFF.45612.2
         (183 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g27630.1                                                       171   4e-43
Glyma08g10620.2                                                       166   1e-41
Glyma08g10620.1                                                       165   2e-41
Glyma16g03060.1                                                       138   4e-33
Glyma07g06450.1                                                       135   4e-32
Glyma07g06450.2                                                       134   4e-32
Glyma06g00360.1                                                       117   8e-27
Glyma04g00310.1                                                       117   9e-27
Glyma06g00360.2                                                        66   2e-11
Glyma18g09580.1                                                        51   8e-07

>Glyma05g27630.1 
          Length = 186

 Score =  171 bits (433), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 93/170 (54%), Positives = 111/170 (65%), Gaps = 12/170 (7%)

Query: 11  GNRELGGARDLISQYRLWPYYEIFCKKSLPLSISETPYLRNVVGDTNIRKGEGMELSQLC 70
           GNRE G  RDLI+Q RLW YY+ FCKKSLP+SISET YL NVVGDT IRKGEGMEL QLC
Sbjct: 10  GNREFGSTRDLINQNRLWLYYKFFCKKSLPVSISETHYLHNVVGDTKIRKGEGMELDQLC 69

Query: 71  QNTYVSEKKARLHPFELDVLSEAFHMK---------KGLPSSVPKSENQSRXXXXXXXXX 121
           +N   SEKK  + PF+LDVLSEAFHM+         KGLP++VPK ENQSR         
Sbjct: 70  KNMDTSEKKTCMCPFDLDVLSEAFHMRDMNPVHLSSKGLPNAVPKLENQSR-DHERKNKK 128

Query: 122 XXXXXXXXXXXXXXLHQVTDG--IANNRIKHHDSHTLQLKNRQEKKRKAE 169
                         LH++ +G  I N RI+ HD H LQLKN+Q+K+ + +
Sbjct: 129 VKDKGEKYRKQKHRLHRINNGSCIENIRIRPHDPHPLQLKNQQDKRNRHQ 178


>Glyma08g10620.2 
          Length = 108

 Score =  166 bits (420), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 78/101 (77%), Positives = 86/101 (85%)

Query: 1   MDRKGKGFGKGNRELGGARDLISQYRLWPYYEIFCKKSLPLSISETPYLRNVVGDTNIRK 60
           MD +GK FG+GN+ELGG RDLI+QYRLWPYYE FCKKSLP+SISET YL NVVGDT IRK
Sbjct: 1   MDLEGKKFGRGNKELGGTRDLINQYRLWPYYEFFCKKSLPVSISETHYLHNVVGDTKIRK 60

Query: 61  GEGMELSQLCQNTYVSEKKARLHPFELDVLSEAFHMKKGLP 101
           GEGMEL QLC+NT  SEKKA L PF+LDVLSEAFHM+   P
Sbjct: 61  GEGMELDQLCKNTDTSEKKACLCPFDLDVLSEAFHMRDMNP 101


>Glyma08g10620.1 
          Length = 114

 Score =  165 bits (418), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 78/101 (77%), Positives = 86/101 (85%)

Query: 1   MDRKGKGFGKGNRELGGARDLISQYRLWPYYEIFCKKSLPLSISETPYLRNVVGDTNIRK 60
           MD +GK FG+GN+ELGG RDLI+QYRLWPYYE FCKKSLP+SISET YL NVVGDT IRK
Sbjct: 1   MDLEGKKFGRGNKELGGTRDLINQYRLWPYYEFFCKKSLPVSISETHYLHNVVGDTKIRK 60

Query: 61  GEGMELSQLCQNTYVSEKKARLHPFELDVLSEAFHMKKGLP 101
           GEGMEL QLC+NT  SEKKA L PF+LDVLSEAFHM+   P
Sbjct: 61  GEGMELDQLCKNTDTSEKKACLCPFDLDVLSEAFHMRDMNP 101


>Glyma16g03060.1 
          Length = 222

 Score =  138 bits (347), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 62/108 (57%), Positives = 80/108 (74%)

Query: 1   MDRKGKGFGKGNRELGGARDLISQYRLWPYYEIFCKKSLPLSISETPYLRNVVGDTNIRK 60
           MD +GK FG G REL GA DLIS ++L P+YE FCK+ LP+SI++T YL NVVGDT IRK
Sbjct: 1   MDPEGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRPLPVSIADTHYLHNVVGDTEIRK 60

Query: 61  GEGMELSQLCQNTYVSEKKARLHPFELDVLSEAFHMKKGLPSSVPKSE 108
           G+GM+L QL QNT   +  AR+ PF+LDVL EAF +++  P  +P +E
Sbjct: 61  GDGMQLDQLIQNTSFRDTNARIQPFDLDVLKEAFQLRETAPIDLPAAE 108


>Glyma07g06450.1 
          Length = 223

 Score =  135 bits (339), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 63/109 (57%), Positives = 81/109 (74%), Gaps = 1/109 (0%)

Query: 1   MDRKGKGFGKGNRELGGARDLISQYRLWPYYEIFCKKSLPLSISETPYLRNVVGDTNIRK 60
           MD +GK FG G REL GA DLIS ++L P+YE FCK+SLP+SI++T YL NVVGDT IRK
Sbjct: 1   MDPEGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRSLPVSIADTHYLHNVVGDTEIRK 60

Query: 61  GEGMELSQLCQNT-YVSEKKARLHPFELDVLSEAFHMKKGLPSSVPKSE 108
           G+GM+L QL QNT    +  AR+ PF+LDVL EAF +++  P  +P +E
Sbjct: 61  GDGMQLEQLIQNTSSFRDTNARIQPFDLDVLKEAFQLRETAPIDLPAAE 109


>Glyma07g06450.2 
          Length = 191

 Score =  134 bits (338), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 63/109 (57%), Positives = 81/109 (74%), Gaps = 1/109 (0%)

Query: 1   MDRKGKGFGKGNRELGGARDLISQYRLWPYYEIFCKKSLPLSISETPYLRNVVGDTNIRK 60
           MD +GK FG G REL GA DLIS ++L P+YE FCK+SLP+SI++T YL NVVGDT IRK
Sbjct: 1   MDPEGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRSLPVSIADTHYLHNVVGDTEIRK 60

Query: 61  GEGMELSQLCQNT-YVSEKKARLHPFELDVLSEAFHMKKGLPSSVPKSE 108
           G+GM+L QL QNT    +  AR+ PF+LDVL EAF +++  P  +P +E
Sbjct: 61  GDGMQLEQLIQNTSSFRDTNARIQPFDLDVLKEAFQLRETAPIDLPAAE 109


>Glyma06g00360.1 
          Length = 214

 Score =  117 bits (292), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 54/109 (49%), Positives = 75/109 (68%), Gaps = 1/109 (0%)

Query: 1   MDRKGKGFGKGNRELGGARDLISQYRLWPYYEIFCKKSLPLSISETPYLRNVVGDTNIRK 60
           MD   K FG G REL GA DL++ ++L P++E FCK+ LP+SIS+  YL NVVGD  IRK
Sbjct: 1   MDPDSKKFGGGPRELTGAVDLLNHFQLLPHFEFFCKRPLPVSISDAHYLYNVVGDIEIRK 60

Query: 61  GEGMELSQLCQNTYVSE-KKARLHPFELDVLSEAFHMKKGLPSSVPKSE 108
           G+GM+L QL Q+T +S      + P +LD+L EAF +K+ +P  +P +E
Sbjct: 61  GDGMQLDQLIQDTSLSSGSNYHIQPLDLDILKEAFQLKETVPIDLPAAE 109


>Glyma04g00310.1 
          Length = 220

 Score =  117 bits (292), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 53/109 (48%), Positives = 76/109 (69%), Gaps = 1/109 (0%)

Query: 1   MDRKGKGFGKGNRELGGARDLISQYRLWPYYEIFCKKSLPLSISETPYLRNVVGDTNIRK 60
           MD   K FG G REL G+ DL++ ++L P++E FCK+ LP+SIS+  YL NVVGD  IRK
Sbjct: 1   MDPDSKKFGGGPRELTGSVDLLNHFKLLPHFEFFCKRPLPVSISDAHYLYNVVGDIEIRK 60

Query: 61  GEGMELSQLCQNTYVSE-KKARLHPFELDVLSEAFHMKKGLPSSVPKSE 108
           G+GM+L QL Q+T +S     R+ P +L++L EAF +K+ +P  +P +E
Sbjct: 61  GDGMQLDQLIQDTSLSSGSNYRIQPLDLNILKEAFQLKETVPIDLPAAE 109


>Glyma06g00360.2 
          Length = 180

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 1/62 (1%)

Query: 48  YLRNVVGDTNIRKGEGMELSQLCQNTYVSE-KKARLHPFELDVLSEAFHMKKGLPSSVPK 106
           YL NVVGD  IRKG+GM+L QL Q+T +S      + P +LD+L EAF +K+ +P  +P 
Sbjct: 14  YLYNVVGDIEIRKGDGMQLDQLIQDTSLSSGSNYHIQPLDLDILKEAFQLKETVPIDLPA 73

Query: 107 SE 108
           +E
Sbjct: 74  AE 75


>Glyma18g09580.1 
          Length = 57

 Score = 50.8 bits (120), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/54 (42%), Positives = 34/54 (62%)

Query: 14 ELGGARDLISQYRLWPYYEIFCKKSLPLSISETPYLRNVVGDTNIRKGEGMELS 67
          E  G  DL++ ++L  ++E FC   LP+SI +  YL NVV D  IRK +G+ L+
Sbjct: 1  EFTGVVDLLNHFKLLLHFEFFCNSMLPVSIIDAQYLHNVVEDIEIRKIDGILLT 54