Miyakogusa Predicted Gene

Lj3g3v3336210.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3336210.1 Non Chatacterized Hit- tr|F6HAX0|F6HAX0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,56.1,3e-19,seg,NULL,CUFF.45592.1
         (156 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g05280.2                                                       173   5e-44
Glyma12g05280.1                                                       172   1e-43

>Glyma12g05280.2 
          Length = 226

 Score =  173 bits (439), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 99/157 (63%), Positives = 117/157 (74%), Gaps = 17/157 (10%)

Query: 1   MMLASCSSSITPGAASFTT------RTCCSXXXXXXXXXXLAPPNAQSRCIVSLSLGPPL 54
           M++AS S+S+T GAA FTT      +TCC           LA PNA+SR   + SLGP L
Sbjct: 1   MVMASKSNSLTFGAACFTTCPFSRTKTCC--------IHFLAIPNAKSRA--TFSLGPTL 50

Query: 55  -RRKSLDILSSSTRITLRHLNTPISAVNSGLEASITDSDENSAILTNAQIVLESEDESKI 113
            +R SL ILSS    T  HL TPISA+NSGLEASITDS++ SAIL NA+IV++SEDE+KI
Sbjct: 51  SKRMSLGILSSPIETTPTHLITPISALNSGLEASITDSNDISAILANAKIVVDSEDENKI 110

Query: 114 QLRVDLTGDQTERVFDRTLISLGRTAPPVPGFRMQKG 150
           QLRVDLTGDQT++VFDR L +LGRTAPPVPGFRMQKG
Sbjct: 111 QLRVDLTGDQTQKVFDRILTNLGRTAPPVPGFRMQKG 147


>Glyma12g05280.1 
          Length = 238

 Score =  172 bits (437), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/157 (63%), Positives = 117/157 (74%), Gaps = 17/157 (10%)

Query: 1   MMLASCSSSITPGAASFTT------RTCCSXXXXXXXXXXLAPPNAQSRCIVSLSLGPPL 54
           M++AS S+S+T GAA FTT      +TCC           LA PNA+SR   + SLGP L
Sbjct: 1   MVMASKSNSLTFGAACFTTCPFSRTKTCC--------IHFLAIPNAKSR--ATFSLGPTL 50

Query: 55  -RRKSLDILSSSTRITLRHLNTPISAVNSGLEASITDSDENSAILTNAQIVLESEDESKI 113
            +R SL ILSS    T  HL TPISA+NSGLEASITDS++ SAIL NA+IV++SEDE+KI
Sbjct: 51  SKRMSLGILSSPIETTPTHLITPISALNSGLEASITDSNDISAILANAKIVVDSEDENKI 110

Query: 114 QLRVDLTGDQTERVFDRTLISLGRTAPPVPGFRMQKG 150
           QLRVDLTGDQT++VFDR L +LGRTAPPVPGFRMQKG
Sbjct: 111 QLRVDLTGDQTQKVFDRILTNLGRTAPPVPGFRMQKG 147