Miyakogusa Predicted Gene
- Lj3g3v3302770.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3302770.1 Non Chatacterized Hit- tr|I1LJQ9|I1LJQ9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,93.09,0,DNA-glycosylase,DNA glycosylase; no description,DNA
glycosylase; no description,Helix-turn-helix, ba,CUFF.45545.1
(236 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma11g13710.1 425 e-119
Glyma13g41880.1 342 1e-94
Glyma12g05700.1 176 3e-44
Glyma15g03550.1 136 2e-32
Glyma05g10860.1 61 1e-09
Glyma15g33590.1 55 8e-08
Glyma13g02480.1 54 2e-07
Glyma15g33540.1 51 1e-06
Glyma13g21460.1 48 9e-06
>Glyma11g13710.1
Length = 236
Score = 425 bits (1092), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/217 (93%), Positives = 210/217 (96%)
Query: 1 MRCSAEAPVDTMGCEKAGNTLPPKERRFAVLVSSLLSSQTKDHVNHGAIQRLLQNDLLTA 60
MRCSA+APVDTMGCEKAG TLPPKERRFAVLVSSLLSSQTKD V HGAIQRLLQNDLLTA
Sbjct: 1 MRCSADAPVDTMGCEKAGETLPPKERRFAVLVSSLLSSQTKDPVTHGAIQRLLQNDLLTA 60
Query: 61 DAINNADEETIKKLIYPVGFYTRKATNLKKIANICLMKYDGDIPNSLEQLLLLPGIGPKM 120
DAIN+ADEETIKKLIYPVGFYTRKA+NLKKIANICLMKYDGDIP+S+EQLLLLPGIGPKM
Sbjct: 61 DAINDADEETIKKLIYPVGFYTRKASNLKKIANICLMKYDGDIPSSIEQLLLLPGIGPKM 120
Query: 121 AHLVMNVGWNNVQGICVDTHVHRICNRLGWVSRLGTKQKTLTPEQTREALQRWLPREEWD 180
AHLVMNVGWNNVQGICVDTHVHRICNRLGWVSRLGTKQKT TPE+TRE LQRWLP+EEW
Sbjct: 121 AHLVMNVGWNNVQGICVDTHVHRICNRLGWVSRLGTKQKTSTPEETREELQRWLPKEEWV 180
Query: 181 PINPLLVGFGQTICTPLRPRCGECGISELCPSAFKET 217
PINPLLVGFGQTICTPLRPRCGEC ISELCPSAFKET
Sbjct: 181 PINPLLVGFGQTICTPLRPRCGECSISELCPSAFKET 217
>Glyma13g41880.1
Length = 224
Score = 342 bits (878), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 158/194 (81%), Positives = 178/194 (91%)
Query: 24 KERRFAVLVSSLLSSQTKDHVNHGAIQRLLQNDLLTADAINNADEETIKKLIYPVGFYTR 83
+ERRFAVL SSLLSSQTK+HV GA QRL +NDLLTADA++ ADEETIKKLIYPVGFY R
Sbjct: 15 QERRFAVLTSSLLSSQTKEHVTRGATQRLGENDLLTADAMDKADEETIKKLIYPVGFYKR 74
Query: 84 KATNLKKIANICLMKYDGDIPNSLEQLLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHR 143
KA+NLKKIANICL+KYDGDIP+S+E+LLLLPG+GPK+AHLVM VGWNNVQGICVDTHVHR
Sbjct: 75 KASNLKKIANICLLKYDGDIPSSIEELLLLPGVGPKIAHLVMIVGWNNVQGICVDTHVHR 134
Query: 144 ICNRLGWVSRLGTKQKTLTPEQTREALQRWLPREEWDPINPLLVGFGQTICTPLRPRCGE 203
ICNRLGWVSR G+KQKTLTPE+TR+ALQRWLP+EEW PIN LLVGFG+ ICTPLRP CG+
Sbjct: 135 ICNRLGWVSRPGSKQKTLTPEETRQALQRWLPKEEWVPINTLLVGFGRAICTPLRPHCGD 194
Query: 204 CGISELCPSAFKET 217
C ++ CPSAFKET
Sbjct: 195 CSVNRFCPSAFKET 208
>Glyma12g05700.1
Length = 104
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 82/92 (89%), Positives = 84/92 (91%)
Query: 125 MNVGWNNVQGICVDTHVHRICNRLGWVSRLGTKQKTLTPEQTREALQRWLPREEWDPINP 184
MNVGWNNVQGICVDTHVH ICN LGWVSRLGTKQKT TPE+TREALQRWLP+EEW PINP
Sbjct: 1 MNVGWNNVQGICVDTHVHHICNHLGWVSRLGTKQKTSTPEETREALQRWLPKEEWVPINP 60
Query: 185 LLVGFGQTICTPLRPRCGECGISELCPSAFKE 216
LLVGFGQ ICTPLR RCGEC ISELCPSA KE
Sbjct: 61 LLVGFGQPICTPLRHRCGECSISELCPSALKE 92
>Glyma15g03550.1
Length = 226
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 85/104 (81%), Gaps = 2/104 (1%)
Query: 24 KERRFAVLVSSLLSSQTKDHVNH--GAIQRLLQNDLLTADAINNADEETIKKLIYPVGFY 81
K R+ ++ + + Q ++V H GA Q L +N LL+ADA+N ADEETIKKLIYPVGFY
Sbjct: 49 KLRKRLLVRCTAIVLQPPNYVYHLVGATQSLRENGLLSADAMNKADEETIKKLIYPVGFY 108
Query: 82 TRKATNLKKIANICLMKYDGDIPNSLEQLLLLPGIGPKMAHLVM 125
TRK +NLKKIANICLMKYDGDIP+S+E+LLLLPG+GPK+AHL++
Sbjct: 109 TRKVSNLKKIANICLMKYDGDIPSSIEELLLLPGVGPKIAHLIL 152
>Glyma05g10860.1
Length = 39
Score = 60.8 bits (146), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/33 (75%), Positives = 32/33 (96%)
Query: 91 IANICLMKYDGDIPNSLEQLLLLPGIGPKMAHL 123
IANICL+KYDGDIP+ +E+LLLLPG+GPK+A+L
Sbjct: 7 IANICLLKYDGDIPSLIEELLLLPGVGPKIAYL 39
>Glyma15g33590.1
Length = 54
Score = 54.7 bits (130), Expect = 8e-08, Method: Composition-based stats.
Identities = 22/29 (75%), Positives = 27/29 (93%)
Query: 95 CLMKYDGDIPNSLEQLLLLPGIGPKMAHL 123
C +KYDGDIP+S+E+LLLLP IGPK+AHL
Sbjct: 26 CFLKYDGDIPSSIEELLLLPRIGPKIAHL 54
>Glyma13g02480.1
Length = 188
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 35/38 (92%)
Query: 91 IANICLMKYDGDIPNSLEQLLLLPGIGPKMAHLVMNVG 128
IANICL+KYDGDIP+S+E+LLLL G+GPK+AHLV+ V
Sbjct: 3 IANICLLKYDGDIPSSIEELLLLLGVGPKIAHLVLIVA 40
>Glyma15g33540.1
Length = 31
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/21 (95%), Positives = 21/21 (100%)
Query: 130 NNVQGICVDTHVHRICNRLGW 150
+NVQGICVDTHVHRICNRLGW
Sbjct: 11 DNVQGICVDTHVHRICNRLGW 31
>Glyma13g21460.1
Length = 1569
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 79/184 (42%), Gaps = 28/184 (15%)
Query: 56 DLLTADAINNADEETIKKLIYPVGFYTRKATNLKKIANICLMKYDG-------DIP--NS 106
D L DA+ AD I + I G R A +K N + ++ D+P +
Sbjct: 1006 DSLDWDAVRCADVSEIAETIKERGMNNRLADRIKNFLNRLVEEHGSIDLEWLRDVPPDKA 1065
Query: 107 LEQLLLLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWV------SRLGTKQKT 160
E LL + G+G K V + +++ VDT+V RI RLGWV L
Sbjct: 1066 KEYLLSIRGLGLKSVECVRLLTLHHL-AFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLE 1124
Query: 161 LTPEQTREALQRWL-PR------EEWDPINPLLVGFGQTICTPLRPRCGECGISELC--- 210
L P E++Q++L PR E ++ ++ FG+ CT +P C C + C
Sbjct: 1125 LYP--VLESIQKYLWPRLCKLDQETLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHF 1182
Query: 211 PSAF 214
SAF
Sbjct: 1183 ASAF 1186