Miyakogusa Predicted Gene

Lj3g3v3302760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3302760.1 Non Chatacterized Hit- tr|J3JYH3|J3JYH3_9CUCU
Uncharacterized protein OS=Dendroctonus ponderosae
PE=,28.94,4e-17,seg,NULL; GAMMA-SECRETASE SUBUNIT
APH-1,Gamma-secretase subunit Aph-1; Aph-1,Gamma-secretase
subunit,CUFF.45544.1
         (249 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g05710.1                                                       365   e-101
Glyma11g13720.1                                                       362   e-100
Glyma11g13720.2                                                       288   6e-78

>Glyma12g05710.1 
          Length = 249

 Score =  365 bits (938), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 180/249 (72%), Positives = 196/249 (78%)

Query: 1   MTVSAGIGYALVALGPSLSIFISVISKKPFXXXXXXXXXXXXXXXXXXXXXXXRGFLPLS 60
           MTV+AG+GYAL+ALGPSLSIF+SVISKKPF                       RG LPL+
Sbjct: 1   MTVAAGMGYALLALGPSLSIFVSVISKKPFLILTVLSSTLLWLISLIVLSGIWRGVLPLN 60

Query: 61  TTAWWPYAILILSSIAFQEGLRLFFWKIYKRLEDILDAFADRVSKPHLFLTDKMLIXXXX 120
           TTAWWP+ ILI SS+AFQE LRLF WKIYKRL+D+LDAFADR+SKPHL LTDKMLI    
Sbjct: 61  TTAWWPFGILIFSSVAFQEALRLFSWKIYKRLQDMLDAFADRISKPHLHLTDKMLIALAG 120

Query: 121 XXXXXXXXXXFFCISLLTPAFGPATYFVDRCSQVPFFLLSALIGLAFVTIHTFSMVIAFN 180
                     FFCISLLTPAFGPATYFVDRCS+VPFFLLSA+I LAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCISLLTPAFGPATYFVDRCSKVPFFLLSAIIALAFVTIHTFSMVIAFN 180

Query: 181 GYAEGNKVDQYFVPIVHFVAGAVTMVNLAPGGCTVGIPLLYFVTFLTLIHCGRMAWRRLT 240
           GY+EGNKVDQYFVPIVH VAG VT+VNLAPGGC VGIPLLY V  LTLIHCGRM WR+LT
Sbjct: 181 GYSEGNKVDQYFVPIVHVVAGMVTLVNLAPGGCAVGIPLLYLVAILTLIHCGRMVWRKLT 240

Query: 241 ENSIRLSNS 249
           EN IRL +S
Sbjct: 241 ENPIRLVHS 249


>Glyma11g13720.1 
          Length = 249

 Score =  362 bits (928), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 182/249 (73%), Positives = 193/249 (77%)

Query: 1   MTVSAGIGYALVALGPSLSIFISVISKKPFXXXXXXXXXXXXXXXXXXXXXXXRGFLPLS 60
           MTV+AGIGYALVALGPSLS+F+SVISKKPF                       RG LPLS
Sbjct: 1   MTVAAGIGYALVALGPSLSLFVSVISKKPFLILTVLSSTLLWLISLIVLSGIWRGVLPLS 60

Query: 61  TTAWWPYAILILSSIAFQEGLRLFFWKIYKRLEDILDAFADRVSKPHLFLTDKMLIXXXX 120
           TTA WP+ ILI SS+AFQE LRLFFWKIYKRLED+LDAFADRVSKPHL LTDKMLI    
Sbjct: 61  TTASWPFGILIFSSVAFQEALRLFFWKIYKRLEDMLDAFADRVSKPHLHLTDKMLIALAG 120

Query: 121 XXXXXXXXXXFFCISLLTPAFGPATYFVDRCSQVPFFLLSALIGLAFVTIHTFSMVIAFN 180
                     FFCISLLTPAFGPATYFVDRCS+VPFFLLSA+I LAFV IHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCISLLTPAFGPATYFVDRCSRVPFFLLSAIIALAFVIIHTFSMVIAFN 180

Query: 181 GYAEGNKVDQYFVPIVHFVAGAVTMVNLAPGGCTVGIPLLYFVTFLTLIHCGRMAWRRLT 240
           GY EGNKVDQYFVPIVH VAG VT+VNLAPGGC VGIPLLY V  LTLIHCGRM WR+LT
Sbjct: 181 GYTEGNKVDQYFVPIVHVVAGMVTLVNLAPGGCAVGIPLLYLVAILTLIHCGRMVWRKLT 240

Query: 241 ENSIRLSNS 249
           EN IR  +S
Sbjct: 241 ENPIRPVHS 249


>Glyma11g13720.2 
          Length = 215

 Score =  288 bits (736), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 147/203 (72%), Positives = 155/203 (76%)

Query: 1   MTVSAGIGYALVALGPSLSIFISVISKKPFXXXXXXXXXXXXXXXXXXXXXXXRGFLPLS 60
           MTV+AGIGYALVALGPSLS+F+SVISKKPF                       RG LPLS
Sbjct: 1   MTVAAGIGYALVALGPSLSLFVSVISKKPFLILTVLSSTLLWLISLIVLSGIWRGVLPLS 60

Query: 61  TTAWWPYAILILSSIAFQEGLRLFFWKIYKRLEDILDAFADRVSKPHLFLTDKMLIXXXX 120
           TTA WP+ ILI SS+AFQE LRLFFWKIYKRLED+LDAFADRVSKPHL LTDKMLI    
Sbjct: 61  TTASWPFGILIFSSVAFQEALRLFFWKIYKRLEDMLDAFADRVSKPHLHLTDKMLIALAG 120

Query: 121 XXXXXXXXXXFFCISLLTPAFGPATYFVDRCSQVPFFLLSALIGLAFVTIHTFSMVIAFN 180
                     FFCISLLTPAFGPATYFVDRCS+VPFFLLSA+I LAFV IHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCISLLTPAFGPATYFVDRCSRVPFFLLSAIIALAFVIIHTFSMVIAFN 180

Query: 181 GYAEGNKVDQYFVPIVHFVAGAV 203
           GY EGNKVDQYFVPIVH VAG V
Sbjct: 181 GYTEGNKVDQYFVPIVHVVAGMV 203