Miyakogusa Predicted Gene

Lj3g3v3271520.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3271520.2 Non Chatacterized Hit- tr|I1LQG9|I1LQG9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,80.19,0,JMJC
DOMAIN-CONTAINING PROTEIN,NULL; HYPOXIA-INDUCIBLE FACTOR 1 ALPHA
INHIBITOR-RELATED,NULL; seg,NU,CUFF.45541.2
         (399 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g05890.1                                                       565   e-161
Glyma11g13910.1                                                       361   e-100
Glyma08g23360.1                                                       164   1e-40
Glyma03g26550.1                                                       149   7e-36
Glyma16g28810.1                                                       144   1e-34
Glyma06g41470.1                                                       120   3e-27
Glyma01g08240.1                                                       103   2e-22
Glyma04g33850.1                                                        91   2e-18
Glyma10g03550.1                                                        76   8e-14
Glyma11g09500.1                                                        62   9e-10
Glyma11g09500.2                                                        50   4e-06

>Glyma12g05890.1 
          Length = 413

 Score =  565 bits (1457), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 293/392 (74%), Positives = 309/392 (78%), Gaps = 25/392 (6%)

Query: 12  PSDHFETPMLDKESPALLHTICEHGGYA-PEMA------------------WEQLHSGPW 52
           PS  F+TP LD+E+ ALLH I EHGGYA   MA                  WEQLHSGPW
Sbjct: 12  PSRGFDTPTLDREAAALLHAISEHGGYAYVSMAVLASGGDIRAAEAAREMAWEQLHSGPW 71

Query: 53  HSVLPVWRDAYSMACLHVARHHYCNGEFKEALRALDMGIIMGGPLLRKDLDSAIEKVSEK 112
           HSVLPVWRDAYSMACLHVARHHY NGEF +ALR LD+GIIMGG LLRKDLDSAIEKVSE+
Sbjct: 72  HSVLPVWRDAYSMACLHVARHHYGNGEFLDALRVLDLGIIMGGTLLRKDLDSAIEKVSEQ 131

Query: 113 AW-CVRVSERSNQDFGNSEHPLVDHEFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLQD 171
               VRVS     D GNSEH LVD EFD                            FL+D
Sbjct: 132 TRRSVRVS-----DLGNSEHRLVDREFDMAEVLQLLPVKSLSTKLVVKKSALSLEKFLKD 186

Query: 172 HYLSGSPVIISDCMSHWPAKAKWNNMDYLLRVAGDRTVPVEVGKNYICADWKQELITFSE 231
           HYLSG PVIISDCMSHWPAK KWN+ DYLLRVAGDRTVPVEVGKNY+C +WKQELITFSE
Sbjct: 187 HYLSGCPVIISDCMSHWPAKMKWNDEDYLLRVAGDRTVPVEVGKNYLCTEWKQELITFSE 246

Query: 232 FLERIKSHGCSPGGPTYLAQHPLFDQIHELRKDILIPDYCFTGGGELRSLNAWFGPAGTV 291
           FL+RIKS  CSPGGPTYLAQHPLFDQI+ELRKDI IPDYCFTGGGELRSLNAWFGPAGTV
Sbjct: 247 FLQRIKSDSCSPGGPTYLAQHPLFDQINELRKDIFIPDYCFTGGGELRSLNAWFGPAGTV 306

Query: 292 TPLHHDPHHNILAQVVGKKYIRLYSASLSDELFPYSETMLCNSSQVDLDDVDESKFPKVQ 351
           TPLHHDPHHNILAQVVGKKYIRLYS+SLS+EL P+S TML NSSQVDLDD+DE KFPKVQ
Sbjct: 307 TPLHHDPHHNILAQVVGKKYIRLYSSSLSEELSPHSGTMLHNSSQVDLDDMDEKKFPKVQ 366

Query: 352 DLEFVDCILEEGEMLYIPPKWWHYVRSLTTSL 383
           DLEFVDCILEEGEMLYIPPKWWHYVRSLTTS 
Sbjct: 367 DLEFVDCILEEGEMLYIPPKWWHYVRSLTTSF 398


>Glyma11g13910.1 
          Length = 214

 Score =  361 bits (926), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 177/199 (88%), Positives = 188/199 (94%)

Query: 185 MSHWPAKAKWNNMDYLLRVAGDRTVPVEVGKNYICADWKQELITFSEFLERIKSHGCSPG 244
           M+HWPAK KWN+ DYLLRVAGDRTVPVEVGKNY+C +WKQELITFSEFL+RIKS  CSPG
Sbjct: 1   MAHWPAKMKWNDEDYLLRVAGDRTVPVEVGKNYLCTEWKQELITFSEFLQRIKSDSCSPG 60

Query: 245 GPTYLAQHPLFDQIHELRKDILIPDYCFTGGGELRSLNAWFGPAGTVTPLHHDPHHNILA 304
           G TYLAQHPLFDQI+ELRKDI IPDYCFTGGGELRSLNAWFGPAGTVTPLHHDPHHNILA
Sbjct: 61  GLTYLAQHPLFDQINELRKDIFIPDYCFTGGGELRSLNAWFGPAGTVTPLHHDPHHNILA 120

Query: 305 QVVGKKYIRLYSASLSDELFPYSETMLCNSSQVDLDDVDESKFPKVQDLEFVDCILEEGE 364
           QVVGKKYIRLYS+SLS+EL P+S TML NSSQVDLDD+DE+KFPKVQDLEFVDCILEEGE
Sbjct: 121 QVVGKKYIRLYSSSLSEELSPHSGTMLHNSSQVDLDDIDENKFPKVQDLEFVDCILEEGE 180

Query: 365 MLYIPPKWWHYVRSLTTSL 383
           MLYIPPKWWHYVRSLTTS 
Sbjct: 181 MLYIPPKWWHYVRSLTTSF 199


>Glyma08g23360.1 
          Length = 160

 Score =  164 bits (416), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 90/147 (61%), Positives = 98/147 (66%), Gaps = 25/147 (17%)

Query: 12  PSDHFETPMLDKESPALLHTICEHGGYAP-------------------EMAWEQLHSGPW 52
           PS  F+TP LD  S ALLH I EHGGY                     + AWEQLHSGPW
Sbjct: 12  PSRGFDTPTLDLVSTALLHAIFEHGGYTCVSMATLAENGDIRTAEAVCKRAWEQLHSGPW 71

Query: 53  HSVLPVWRDAYSMACLHVARHHYCNGEFKEALRALDMGIIMGGPLLRKDLDSAIEKVSEK 112
           HSVL VWR+AYSMACL VARHHY NGEFK+ LR LD+GIIMGG LLRKDLDSAIEK+SE+
Sbjct: 72  HSVLSVWREAYSMACLLVARHHYHNGEFKDVLRVLDLGIIMGGTLLRKDLDSAIEKISEQ 131

Query: 113 AW-CVRVSERSNQDFGNSEHPLVDHEF 138
               VRVS     D GNSEH LVD + 
Sbjct: 132 TRKSVRVS-----DLGNSEHRLVDRKL 153


>Glyma03g26550.1 
          Length = 207

 Score =  149 bits (375), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 85/147 (57%), Positives = 93/147 (63%), Gaps = 30/147 (20%)

Query: 12  PSDHFETPMLDKESPALLHTICEHGGY-------------------APEMAWEQLHSGPW 52
           PS  F+TP LD  S ALLH I EHGGY                     + AWEQLHS   
Sbjct: 12  PSRGFDTPTLDLVSTALLHAIFEHGGYTCVSMATLAENGDIRTAEAVCKRAWEQLHS--- 68

Query: 53  HSVLPVWRDAYSMACLHVARHHYCNGEFKEALRALDMGIIMGGPLLRKDLDSAIEKVSEK 112
             VL VWR+AYSMACL VARHHY NGEFK+ LR LD+GIIMGG LLRKDLDSAIEK+SE+
Sbjct: 69  --VLSVWREAYSMACLLVARHHYHNGEFKDVLRVLDLGIIMGGTLLRKDLDSAIEKISEQ 126

Query: 113 AW-CVRVSERSNQDFGNSEHPLVDHEF 138
               VRVS     D GNSEH LVD + 
Sbjct: 127 TRKSVRVS-----DLGNSEHRLVDRKL 148


>Glyma16g28810.1 
          Length = 665

 Score =  144 bits (364), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 81/143 (56%), Positives = 90/143 (62%), Gaps = 25/143 (17%)

Query: 12  PSDHFETPMLDKESPALLHTICEHGGYA---------------PEMAWEQLHSGPWHSVL 56
           PS  F+TP LD  S  LLH I EHGGY                 E A E+     WHSVL
Sbjct: 241 PSRDFDTPTLDLVSTTLLHAIFEHGGYTCLSMATLAENGDIRTAEAACER----AWHSVL 296

Query: 57  PVWRDAYSMACLHVARHHYCNGEFKEALRALDMGIIMGGPLLRKDLDSAIEKVSEKAW-C 115
            VWR+AYSMACL V RHHY NGEF++ LR LD+GIIMGG LLRKDLDSAIEK+SE+    
Sbjct: 297 SVWREAYSMACLLVTRHHYRNGEFRDTLRVLDLGIIMGGTLLRKDLDSAIEKISEQTRKS 356

Query: 116 VRVSERSNQDFGNSEHPLVDHEF 138
           VRVS     D GNSEH LVD + 
Sbjct: 357 VRVS-----DLGNSEHRLVDRKL 374


>Glyma06g41470.1 
          Length = 114

 Score =  120 bits (301), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/108 (61%), Positives = 70/108 (64%), Gaps = 20/108 (18%)

Query: 12  PSDHFETPMLDKESPALLHTICEHGGYA-------------------PEMAWEQLHSGPW 52
           PS  F+TP LD ES ALLH I EHG YA                    EMAWEQLHSGPW
Sbjct: 8   PSGCFDTPTLDLESTALLHGISEHGEYAYVSMAALVANGDIRTVEAVCEMAWEQLHSGPW 67

Query: 53  HSVLPVWRDAYSMACLHVARHHYCNGEFKEALRALDMGIIMGGPLLRK 100
           HSVLPVWRD YSMACL VA HHY N EF++ LR LD+G IMGG LL K
Sbjct: 68  HSVLPVWRDTYSMACLLVASHHYRNSEFRDTLRVLDLG-IMGGTLLCK 114


>Glyma01g08240.1 
          Length = 209

 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/94 (61%), Positives = 61/94 (64%), Gaps = 23/94 (24%)

Query: 41  EMAWEQLHSGPWHSVLPVWRDAYSMACLHVARHHYCNGEFKEALRALDMGIIMGGPLLRK 100
           EMAWEQLHSGPWHSVLP+W DAYSMACL VARHHY N                 G LLRK
Sbjct: 18  EMAWEQLHSGPWHSVLPMWHDAYSMACLLVARHHYSN-----------------GTLLRK 60

Query: 101 DLDSAIEKVSEKAW-CVRVSERSNQDFGNSEHPL 133
           DLDSAIEK+SE+    V VS     D GNSEH L
Sbjct: 61  DLDSAIEKISEQTRKTVMVS-----DLGNSEHRL 89


>Glyma04g33850.1 
          Length = 45

 Score = 90.9 bits (224), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/45 (86%), Positives = 41/45 (91%)

Query: 213 VGKNYICADWKQELITFSEFLERIKSHGCSPGGPTYLAQHPLFDQ 257
           VGKNY+C  WKQELITFSEFL+RIKS  CSPGGPTYLAQHPLFDQ
Sbjct: 1   VGKNYLCTKWKQELITFSEFLQRIKSDSCSPGGPTYLAQHPLFDQ 45


>Glyma10g03550.1 
          Length = 546

 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 105/251 (41%), Gaps = 54/251 (21%)

Query: 178 PVIISDCMSHWPAKAKWN----NMDYLLRVAGDRTVPVEVGKN----YICADWKQEL-IT 228
           P +   C   W A ++WN     +DYL    G  TV   V ++    Y      Q + + 
Sbjct: 30  PAVFRGCTKSWNAFSQWNPSNGGLDYLRARVGYCTVEAMVSQSAPVFYGDLGGHQRVPLP 89

Query: 229 FSEFLERIKSH-----------GCSPGGPT------------------YLAQHPLFD--- 256
           FS FL+  K                P   T                  YLAQ  + +   
Sbjct: 90  FSTFLDFCKKRMQMQSKHQQGLDQCPASQTHDDTEHAYLALEDAPEQIYLAQVSIMNSDR 149

Query: 257 ----QIHELRKDILIPDYCFTGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYI 312
               Q+  LR+DI  P    +   EL S+N W   A   +  H+DPHHN+L  V G K +
Sbjct: 150 QENVQLETLREDIQTPPILVSK--ELSSINLWMNNAQARSSTHYDPHHNLLCIVSGCKQV 207

Query: 313 RLYSASLSDELFP---YSETMLCNSSQVDLDDVDESKFPKVQ-DLEFVD-CILEEGEMLY 367
            L+  S S  L+P   Y E    N S V L++ D S +P+ +  +EF    +L+ G+ L+
Sbjct: 208 VLWPPSASPSLYPMPIYGEA--SNHSSVTLENPDYSIYPRAECSMEFAQKAVLQAGDALF 265

Query: 368 IPPKWWHYVRS 378
           IP  W+H V S
Sbjct: 266 IPEGWFHQVDS 276


>Glyma11g09500.1 
          Length = 349

 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 102/257 (39%), Gaps = 51/257 (19%)

Query: 168 FLQDHYLSGSPVIISDCMSHWPAKAKWNNMDYLLRVAGDRTVPVEV---GKNYICADWKQ 224
           FL+D      P IIS+ ++HWPA + W N  +L +     TV V +   G     A  + 
Sbjct: 37  FLRDFITPNKPCIISNAITHWPALSSWTNPSHLSQSLSGATVSVHLTPTGAADALAPLRS 96

Query: 225 ELITFSEFLERIK-SHG---CSPGGPTYLA-----QHPLFDQIHELRKDILIPDYCFTG- 274
            L   S  ++R+   H     S   P+ L      Q+  F   +    D   P + +   
Sbjct: 97  SLCFASAHVQRVPFPHALDLISFSEPSKLVAYAQQQNDCFRSEYSSLADDCDPHFGWATE 156

Query: 275 --GGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYI---------RLYSASLSDEL 323
             G E  ++N W G   + T  H D + N+ A V G+K+          RLY        
Sbjct: 157 AIGSEPEAVNLWIGNQHSRTSFHKDHYENLYAVVTGEKHFLLLPPTDVHRLYIRDYPAAT 216

Query: 324 FPYSETMLCNSSQVDLD----------------------DVDESKFP-KVQDLEFVDCIL 360
           + YS     ++ + DL+                      D + +KFP         +C +
Sbjct: 217 YSYS----SDTGEFDLELEKPTRYVPWCSVDPYPSLETMDNEMTKFPLYFNGPRPFECTV 272

Query: 361 EEGEMLYIPPKWWHYVR 377
           + GE+LY+P  W+H+VR
Sbjct: 273 KAGEVLYLPSMWFHHVR 289


>Glyma11g09500.2 
          Length = 280

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 15/162 (9%)

Query: 168 FLQDHYLSGSPVIISDCMSHWPAKAKWNNMDYLLRVAGDRTVPVEV---GKNYICADWKQ 224
           FL+D      P IIS+ ++HWPA + W N  +L +     TV V +   G     A  + 
Sbjct: 37  FLRDFITPNKPCIISNAITHWPALSSWTNPSHLSQSLSGATVSVHLTPTGAADALAPLRS 96

Query: 225 ELITFSEFLERIK-SHG---CSPGGPTYLA-----QHPLFDQIHELRKDILIPDYCFTG- 274
            L   S  ++R+   H     S   P+ L      Q+  F   +    D   P + +   
Sbjct: 97  SLCFASAHVQRVPFPHALDLISFSEPSKLVAYAQQQNDCFRSEYSSLADDCDPHFGWATE 156

Query: 275 --GGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYIRL 314
             G E  ++N W G   + T  H D + N+ A V G+K+  L
Sbjct: 157 AIGSEPEAVNLWIGNQHSRTSFHKDHYENLYAVVTGEKHFLL 198