Miyakogusa Predicted Gene
- Lj3g3v3261430.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3261430.1 Non Chatacterized Hit- tr|I1NEW4|I1NEW4_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,43.75,4e-16,zf-CCHC_4,Zinc knuckle CX2CX4HX4C; DUF4283,Domain of
unknown function DUF4283; ZF_CCHC,Zinc finger, ,CUFF.45535.1
(116 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma20g22670.1 89 1e-18
Glyma03g06930.1 72 1e-13
Glyma17g29390.1 70 4e-13
Glyma03g16680.1 70 6e-13
Glyma12g08620.1 58 3e-09
Glyma11g29990.1 57 3e-09
Glyma05g02090.1 56 7e-09
Glyma03g07780.1 56 1e-08
Glyma14g34030.1 55 1e-08
Glyma12g06520.1 54 3e-08
Glyma14g10380.1 53 7e-08
Glyma20g08890.1 52 1e-07
Glyma18g17370.1 50 5e-07
Glyma17g16140.1 50 5e-07
Glyma20g22250.1 50 8e-07
Glyma07g35720.1 48 2e-06
Glyma09g09240.1 48 2e-06
Glyma03g07740.1 48 2e-06
Glyma11g25550.1 48 3e-06
Glyma20g20170.1 47 3e-06
Glyma06g38080.1 47 4e-06
Glyma10g12520.1 47 5e-06
Glyma20g08000.1 46 7e-06
>Glyma20g22670.1
Length = 274
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
Query: 2 WVRVYDLPLKLKSEAVARRLGDSIGSFVEVDCKLENRLGLFFRIKVTIDLTKPLLRGTML 61
W+R Y++P+ +++ VA + ++G FVE D + E+ LGLF IKV ID++KPL +G L
Sbjct: 21 WIRGYNVPIGFRTQKVATMIEGALGEFVEWDGREESWLGLFICIKVMIDISKPLRKGLQL 80
Query: 62 FWQGKE-LKVYFRYERLPNFCFACGRIGHQIKDCDE 96
GK+ ++ +Y+RL NFC+ACGR+ H +K+C+E
Sbjct: 81 KLGGKKPRRLRVKYDRLSNFCYACGRMDHVLKECEE 116
>Glyma03g06930.1
Length = 128
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 17 VARRLGDSIGSFVEVDCKLENRLGLFFRIKVTIDLTKPLLRGTMLFWQGKELK-VYFRYE 75
+ +G+++GSF++ D E R+G R+++ +D+TKPL RG M+ KE + + F+YE
Sbjct: 45 IEETIGNTLGSFIKWDQSEEYRVGKSMRVRILMDITKPLRRGVMMKIGVKEAREIIFKYE 104
Query: 76 RLPNFCFACGRIGHQIKDCDEFED 99
RL N C+ CG + H +K+C++ ED
Sbjct: 105 RLGNICYMCGFLDHLLKECEDDED 128
>Glyma17g29390.1
Length = 138
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 61/104 (58%), Gaps = 4/104 (3%)
Query: 12 LKSEAVARRLGDSIGSFVEVDCKLENRLGLFFRIKVTIDLTKPLLRGTML-FWQGKELKV 70
L+++ +G+++G ++ D E+RLG ++V ID+ KPL RG M+ + K
Sbjct: 37 LRTKDTTSIVGNALGKIIDWDASEESRLGTTIGVRVLIDICKPLKRGMMIGCGENGPKKS 96
Query: 71 YFRYERLPNFCFACGRIGHQIKDCDEFE-DVEEDHDAVDFPFGP 113
+F+YE L NFC+ CG + H K C E + +E+ D++ PFGP
Sbjct: 97 FFKYEILGNFCYCCGSLDHNFKKCKERDGGAKENLDSL--PFGP 138
>Glyma03g16680.1
Length = 140
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query: 17 VARRLGDSIGSFVEVDCKLENRLGLFFRIKVTIDLTKPLLRGTML-FWQGKELKVYFRYE 75
V +G+SIG F+E D ++R G R++V++D+ KPL RG + +G + K++F+Y+
Sbjct: 20 VVTLVGNSIGGFMEWDKGDKSRFGKVMRVRVSMDVGKPLKRGMFIKMGKGIQRKIFFKYK 79
Query: 76 RLPNFCFACGRIGHQIKDCD 95
RL NFC+ CG + H +K+C+
Sbjct: 80 RLGNFCYTCGGLDHVLKECE 99
>Glyma12g08620.1
Length = 323
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 1 MWVRVYDLPLKLKSEAVARRLGDSIGSFVEVDCKLENRLGLFFRIKVTIDLTKPLLRGTM 60
+W+R+ P++L +E +R+G S+G F+ VD ++T L M
Sbjct: 111 VWIRIQRHPIELYNEVFLKRIGLSLGKFLMVD-------------RLTRSTQGENLPNYM 157
Query: 61 LFWQGKEL-----------KVYFRYERLPNFCFACGRIGHQIKDCDEFEDVEEDHDAVDF 109
L W K L K+ YE L + CF CGR+GH+ C+ + E + + V
Sbjct: 158 LNWIWKSLWKPISMSEVIIKLLLEYEGLHSICFRCGRVGHKKDQCNVLPEKESNREEVME 217
Query: 110 PFGPWL 115
FG W+
Sbjct: 218 CFGVWM 223
>Glyma11g29990.1
Length = 142
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
Query: 1 MWVRVYDLPLKLKSEAVARRLGDSIGSFVEVD--CKLENRLGLFFRIKVTIDLTKPLLRG 58
+W+++ LP++L ++ ++G S+G F++VD + R G F RI V +DL KPL
Sbjct: 50 IWIQIQRLPIELYNDVFLNKIGSSLGKFLKVDRLTSIHYR-GKFARICVELDLEKPL--E 106
Query: 59 TMLFWQGKELKVYFRYERLPNFCFACGRIGHQIKDCDE 96
++ +G K+Y YE L + CF CG + H+ C E
Sbjct: 107 MHIYVRGH--KLYLEYEGLHSICFWCGLVRHKKDQCRE 142
>Glyma05g02090.1
Length = 129
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 2 WVRVYDLPLKLKSEAVARRLGDSIGSFVEVDCKLENRLGL---FFRIKVTIDLTKPLLRG 58
WV+ +++P + A + +G+ +G F+E + K N L + R++V I++ KPL R
Sbjct: 41 WVQEHNIPAAFMTFAPGQNIGNYLGEFLEYNNK--NNLSFWRKYMRLRVLINVRKPLKRT 98
Query: 59 TMLFWQGKELK-VYFRYERLPNFCFACGRI 87
+ G E K V F+YERL NFC+ CG +
Sbjct: 99 KKIRKPGGEAKEVAFKYERLGNFCYFCGML 128
>Glyma03g07780.1
Length = 283
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 3 VRVYDLPLKLKSEAVARRLGDSIGSFVEVDCKLE-NRLGLFFRIKVTIDLTKPLLRGTML 61
V++++LP+ S+ V +G+ I +++ D K N L F RI V +D+ KP ++ +
Sbjct: 177 VQIHNLPMGFMSQMVGESIGNFIDQYLDYDEKNNVNYLRSFMRIGVLMDVQKPFMKSKIK 236
Query: 62 FWQGKELKVYFRYERLPNFCFACGRIGHQIKDCDEFEDVEED 103
G+ + ++YE L FC+ CG +GH C +++D
Sbjct: 237 KPGGEFKEFCYKYEYLGPFCYFCGILGHTEDHCRTLLFMQQD 278
>Glyma14g34030.1
Length = 112
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 1 MWVRVYDLPLKLKSEAVARRLGDSIGSFVEVDCKLENRLG---LFFRIKVTIDLTKPLLR 57
+WV+++D+P + V + + + I F+E D K N G F RIKV + L PL
Sbjct: 8 LWVQLHDVPTGFVTPMVGKHMENFIREFLEYDSK--NNTGGSRPFMRIKVLVGLRNPLKT 65
Query: 58 GTMLFW-QGKELKVYFRYERLPNFCFACGRIGHQIK 92
G L +G+ + ERL NFCFAC IGH+ K
Sbjct: 66 GKKLIKPKGEWQMIESNCERLGNFCFACDVIGHREK 101
>Glyma12g06520.1
Length = 125
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 17/103 (16%)
Query: 1 MWVRVYDLPLKLKSEAVARRLGDSIGSFVEVD-CKLENRLGLFFRIKVTIDLTKPLLRGT 59
+W+R+ LP++L ++ +R+ ++ F++VD L + G F RI V +DL KPL
Sbjct: 30 VWIRIQRLPIELYNDVFLKRIRSNLSKFLKVDKLTLIHSRGKFIRICVKLDLEKPL---- 85
Query: 60 MLFWQGKELKVYFR-----YERLPNFCFACGRIGHQIKDCDEF 97
E +Y R E L + CF CGR GH+ C E
Sbjct: 86 -------EFHIYVRRHKLQIEGLHSICFQCGRFGHKKVQCLEI 121
>Glyma14g10380.1
Length = 237
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 7/77 (9%)
Query: 24 SIGSFVEVD--CKLENRLGLFFRIKVTIDLTKPLLRGTMLFWQGKELKVYFRYERLPNFC 81
S G F+++D +++R G F I V +DL KP R T ++ +G K++ YE L + C
Sbjct: 108 SFGKFLKIDKLTSIQSR-GKFASIYVELDLEKP--RETHIYVKGH--KLFLEYEDLHSIC 162
Query: 82 FACGRIGHQIKDCDEFE 98
F CGR+GH+ DC E +
Sbjct: 163 FKCGRVGHKKDDCTELQ 179
>Glyma20g08890.1
Length = 143
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 1 MWVRVYDLPLKLKSEAVARRLGDSIGSFVEVD--CKLENRLGLFFRIKVTIDLTKPLLRG 58
+W+ + LP++L ++ +R+G +G+F+++D + +R G F I + +DL KPLL
Sbjct: 52 VWIHIQRLPIELYNDIFLKRVGMVLGNFLKIDRLNHMHSR-GKFMHIFIELDLGKPLLTH 110
Query: 59 TMLFWQGKELKVYFRYERLPNFCFACGRIGHQIKDC 94
++ K + YE L CF C +GH+ C
Sbjct: 111 IVV----KGFLLNLEYEGLHLICFNCSHLGHKKDGC 142
>Glyma18g17370.1
Length = 110
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 17 VARRLGDSIGSFVEVDCKLE-NRLGLFFRIKVTIDLTKPLLRGTMLFWQGKELKVYFRYE 75
+ LG+ +G F+E D K N L F RIKV +D+ KPLLR + ELKV +YE
Sbjct: 45 IGEGLGNYMGQFLEYDEKNNVNFLRSFMRIKVLLDVRKPLLRSKKIIKPDGELKVIMKYE 104
Query: 76 RLPNFC 81
RL FC
Sbjct: 105 RLGPFC 110
>Glyma17g16140.1
Length = 158
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 1 MWVRVYDLPLKLKSEAVARRLGDSIGSFVEVDCKLEN-RLGLFFRIKVTIDLTKPLLRGT 59
+W++ +++ L V + +G+ +G ++ D K + R + RI+V ID+ KPL
Sbjct: 36 IWIQFHNIHLGFTMIIVGQNIGNFLGQYLIYDDKQNSSRWMSYKRIRVVIDINKPLKCTK 95
Query: 60 MLFWQGKELK-VYFRYERLPNFCFACGRIGHQIKDC 94
+ +G + V F+YERL FC CG +GH C
Sbjct: 96 KIRKEGGDATIVKFKYERLHAFCHFCGFLGHNEDYC 131
>Glyma20g22250.1
Length = 236
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 1 MWVRVYDLPLKLKSEAVARRLGDSIG-SFVEVDCKLENRLGLFFRIKVTIDLTKPLLRG- 58
+WV++ LPL L ++G +IG V +C + RI V +D+TK L++
Sbjct: 140 LWVKLPKLPLHLWGVKSLNKIGSAIGVPLVTDECTASKIRVSYARILVEVDITKTLVKEV 199
Query: 59 TMLFWQGKELKVYFRYERLPNFCFACGRIGHQIK 92
T+ ++G+++ YE P +C C ++GHQ K
Sbjct: 200 TIKDYEGRKISQGVEYEWRPLYCEKCHKLGHQCK 233
>Glyma07g35720.1
Length = 124
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 2 WVRVYDLPLKLKSEAVARRLGDSIGSFVEVDCKLENRLG---LFFRIKVTIDLTKPLLRG 58
WV+++D+P + V + + + I F+E D K N G F RIKV + L PL G
Sbjct: 39 WVQLHDVPTGFVTPMVGKHMENFIREFLEYDSK--NNTGGSRPFMRIKVLVGLRNPLKTG 96
Query: 59 TMLFW-QGKELKVYFRYERLPNFCFAC 84
L +G+ + ERL NFCFAC
Sbjct: 97 KKLRKPEGEWQMIQSNCERLGNFCFAC 123
>Glyma09g09240.1
Length = 208
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 2 WVRVYDLPLKLKSEAVARRLGDSIGSFVEVDCKLENRLGLFFRIKVTIDLTKPLLRGTML 61
WV++++LPL ++ + + LG+ I +F+E D K N L F ++++ +K + R
Sbjct: 84 WVQIHNLPLGFMTQVIGQNLGNFIVNFLEYDEK--NNLN-FLPPFISLNKSKRIKRK--- 137
Query: 62 FWQGKELKVYFRYERLPNFCFACGRIGH 89
+G+ KV F+YE L FC+ C + H
Sbjct: 138 --EGEATKVSFKYEHLRPFCYLCELMRH 163
>Glyma03g07740.1
Length = 240
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 1 MWVRVYDLPLKLKSEAVARRLGDSIGSFVEVDCKLENRLGL-FFRIKVTIDLTKPLLRG- 58
+WV++ LP+ L + ++G ++G+ + D NRL + + RI V +D+TK L +
Sbjct: 113 IWVKLPQLPIILWGDTSLNKIGSALGNPIMTDECTANRLRVSYARILVEMDITKELPQTI 172
Query: 59 TMLFWQGKELKVYFRYERLPNFCFACGRIGHQIKDCDE 96
T++ +G++++ YE FC C ++GH CD+
Sbjct: 173 TIVDNEGEKIQQAIEYEWRSLFCNKCQKVGHS---CDK 207
>Glyma11g25550.1
Length = 213
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 1 MWVRVYDLPLKLKSEAVARRLGDSIGSFVEVD-CKLENRLGLFFRIKVTIDLTKPLLRGT 59
MW+R+ LP++L + R+G S+ F++VD L + G F R+ + +DL KPL T
Sbjct: 69 MWIRIQCLPIELYNNIFLNRIGMSLEKFLKVDRLTLIHFRGKFARLGIELDLEKPL--ET 126
Query: 60 MLFWQGKELKVYFRYERLPNFCFACGRIGHQ--IKDCDEF 97
++ G L + YE + CF GR HQ IK + +
Sbjct: 127 HIYLHGFMLNL--EYEGFYSICFHYGRGWHQHVIKASNNY 164
>Glyma20g20170.1
Length = 356
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 1 MWVRVYDLPLKLKSEAVARRLGDSIGS-FVEVDCKLENRLGLFFRIKVTIDLTKPLLRG- 58
+W+++ LPL L E ++G +IG+ V +C + R+ V +D+T+ L+
Sbjct: 184 IWIKLPKLPLYLWGERSLNKIGSAIGTPMVTDECTTHKLRVSYARMLVEVDITRKLVEEI 243
Query: 59 TMLFWQGKELKVYFRYERLPNFCFACGRIGHQ 90
T+ G+++ YE P FC C +IGHQ
Sbjct: 244 TIKDKDGRKMMQPIEYEWRPKFCDKCQKIGHQ 275
>Glyma06g38080.1
Length = 320
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 1 MWVRVYDLPLKLKSEAVARRLGDSIGSFVEVD-CKLENRLGLFFRIKVTIDLTKPLLRG- 58
+WV++ LPL L ++G +IG+ + D C + + RI V +D+T+ L+
Sbjct: 118 IWVKLPQLPLCLWGLKSLNKIGSAIGNPLMTDECTTQKLRVSYARILVEVDITQKLVEEI 177
Query: 59 TMLFWQGKELKVYFRYERLPNFCFACGRIGHQ 90
T+ G ++K YE P FC C + GHQ
Sbjct: 178 TISDRTGGKIKQIVEYEWKPEFCEKCQKAGHQ 209
>Glyma10g12520.1
Length = 102
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 1 MWVRVYDLPLKLKSEAVARRLGDSIGS-FVEVDCKLENRLGLFFRIKVTIDLTKPLLRGT 59
+W+++ LPL L E ++G +IG+ V +C + R+ V +D+T+ L+
Sbjct: 7 IWIKLPKLPLYLWGERSLNKIGSAIGTPMVTDECTTHKLKVSYARMLVEVDITRKLVEEI 66
Query: 60 MLFWQ-GKELKVYFRYERLPNFCFACGRIGHQ 90
+ + G+++ YE P FC C +IGHQ
Sbjct: 67 AIKDKDGRKIMQPIEYEWRPKFCDKCQKIGHQ 98
>Glyma20g08000.1
Length = 197
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 2 WVRVYDLPLKLKSEAVARRLGDSIGSFVEVDCKLENRLGL---FFRIKVTIDLTKPLLRG 58
W+ +++LP+ E V + LG+ +G F+E D N LG+ + RI+V +D PL +
Sbjct: 46 WIPIHNLPIGFMIETVGKHLGNFVGEFMEYDP--NNNLGVWRAYMRIQVRVDRRLPLKK- 102
Query: 59 TMLFWQGKELK-VYFRYERLPNFCFACG 85
+ G E + V F+YERL F F G
Sbjct: 103 --VKKPGGEWRLVQFKYERLGTFFFLYG 128