Miyakogusa Predicted Gene

Lj3g3v3243180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3243180.1 tr|B9GQ57|B9GQ57_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_753951 PE=4
SV=1,27.18,8e-18,DUF295,Protein of unknown function DUF295; A Receptor
for Ubiquitination Targets,F-box domain, cycli,CUFF.45515.1
         (392 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g11470.1                                                       223   4e-58
Glyma02g04930.1                                                       120   3e-27
Glyma04g02200.1                                                        75   2e-13
Glyma16g22900.1                                                        60   5e-09
Glyma09g19520.1                                                        55   1e-07

>Glyma10g11470.1 
          Length = 368

 Score =  223 bits (567), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 167/376 (44%), Positives = 206/376 (54%), Gaps = 33/376 (8%)

Query: 26  VDWSQLPTELLHLISERLDSPLYLL-RFRSVCSTWRRSSSPAVTPLHHFPLIFPTLSDDP 84
            DWS+LP +LLH IS+ L      L RFRSVCS+WR S+ P  +P +      P++S   
Sbjct: 2   ADWSELPKDLLHKISQLLLESPLYLLRFRSVCSSWRSSTPP--SPFN------PSIS--L 51

Query: 85  ASTVFLSQRTVFLIXXXXXXXXXXXXXL-LVQIGQDLSGGT-RLFDPLSSHQHFPFSSPR 142
            +T  LS RT+ L+               LV++  D    T RLF PLS    FP   PR
Sbjct: 52  TNTFSLSHRTLLLLNPNSNPNPNPRPRPWLVKLSLDPHASTARLFHPLS---RFPMKLPR 108

Query: 143 -VLDYYHHPVLDLGNVFILHHSIPPPDYRDSIYKRKVV---AAIAGEASILLTIHDSGKL 198
             LD +  P LDLG  F+L ++      RDS+Y  K+V        +   LLTIH SGKL
Sbjct: 109 FALDLFTLPALDLGREFLLTNT---RHTRDSLYIEKLVFLPLTHRKDRFALLTIHVSGKL 165

Query: 199 AFFRSGGDCWTLIPVKQHMPYDDVCVFKGRPCAVNSTGLTVAVG-SGPYMEVIAEPVLGG 257
           A FRSG D WT+IP     PYDDVCVFKG     +S G TV V      + + AEPV GG
Sbjct: 166 ALFRSGEDGWTVIP-DMPTPYDDVCVFKGNLYGADSNGRTVRVRPDDGGLTLAAEPVFGG 224

Query: 258 DEKFLVESEGELLMVDKHISS-TCYENXXXXXXXXXXXXXXRFEWSKPVKFDVYRLDEKE 316
           D+KFLVESEG LL+VD ++S  +C +                  W + VKFDV+RLDE+ 
Sbjct: 225 DKKFLVESEGALLLVDMYLSYYSCTQGLFHEDFDEEDVAG--MGWERTVKFDVFRLDEEG 282

Query: 317 KMWVELESLGDRVLFLGHVCAFSASASDLGVRSGNCVVFADLTLK-----QGVGVFPLDV 371
           K WVEL  LG+RVLFLG  CAFSASA DL +  GNCV F D  L       G+GVF LD 
Sbjct: 283 KKWVELTDLGERVLFLGDDCAFSASAKDLNLGRGNCVAFRDDGLGFNRVLNGMGVFRLDD 342

Query: 372 GWILLLSDIPDYSRLI 387
           G I  LS+   +S L 
Sbjct: 343 GKISPLSECAGFSELF 358


>Glyma02g04930.1 
          Length = 379

 Score =  120 bits (301), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 164/354 (46%), Gaps = 38/354 (10%)

Query: 26  VDWSQLPTELLHLISERLDSPLYLLRFRSVCSTWRRSSSPAVTPLHHFPLIFPTLSDDPA 85
           VDWS+LP EL   I + L++ + ++RFRSVC + R S  P +     FP+  P   +   
Sbjct: 5   VDWSELPIELWPKIGKSLENHMDIVRFRSVCESCRSSMPPPLPNSPSFPMQIPHPLNHSI 64

Query: 86  STVFLSQRTVFLIXXXXXXXXXXXXXL-------LVQIGQDLSGGTR----LFDPLSSHQ 134
            T+ L+Q TV++I             L       L+++ +  +        L  P+S  +
Sbjct: 65  ETL-LNQATVYVIEPTDANGASKLEPLPVSSKGWLIKVEESKNHNHNHPLTLLSPISDRK 123

Query: 135 -HFPF--SSPRVLDYYHHPVLDLGNVFILHHSIPPPDYRDSIYKRKVV-----AAIAGEA 186
             +P   +SP + +     V++L   +  + S        S    KVV       I  + 
Sbjct: 124 IVYPHGTNSPVLWNLLEFRVIELCKSYTTNIS--------SAAVSKVVFFPNSPWIGAQD 175

Query: 187 SILLTIHDSGKLAFFRSGGDCWTLIPVKQHMPYDDVCVFKGRPCAVNSTGLTVAVGSGPY 246
           S+   I   GKL F + G + WTL+  K    YDDV VFKG+    +  G    + +   
Sbjct: 176 SVACCIFLEGKLGFMKHGDEKWTLVDNKNFF-YDDVIVFKGQFYVTDDRGTISWIDTSSL 234

Query: 247 MEV-IAEPVLG-GDEKFLVESEGELLMVDKHISSTCYENXXXXXXXXXXXXXXRFEWSKP 304
             V  + P+ G GD+K LVES G L +VD++     YE+              R   +  
Sbjct: 235 KLVQFSPPLCGLGDKKHLVESCGSLYVVDRY-----YESETSRRRNYVGGREDRV--AAV 287

Query: 305 VKFDVYRLDEKEKMWVELESLGDRVLFLGHVCAFSASASDLGVRSGNCVVFADL 358
           V F VY+LDE+   WV++++LGDR   LG+ C+FS SA +L     NC+ F D+
Sbjct: 288 VCFKVYKLDEEWGKWVDVKNLGDRAFVLGNSCSFSVSAKELTGYQENCIYFTDI 341


>Glyma04g02200.1 
          Length = 372

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 153/360 (42%), Gaps = 69/360 (19%)

Query: 25  AVDWSQLPTELLHLISERLDSPLYLLRFRSVCSTWRRSSSPAVTPLHHFPLIFPTLSDDP 84
            V+W +LP ELL  IS+ L   +  LRFRSVC +WR SS P + PLH  P   P L    
Sbjct: 2   GVEWGELPPELLESISKTLTIYVDYLRFRSVCRSWR-SSVPKI-PLH-LPPQLPWL---- 54

Query: 85  ASTVFLSQRTVFLIXXXXXXXXXXXXXLLVQIGQ---------DLSGGTRLFDPLS-SHQ 134
                LS+R  F +                +I           D +   RL +PL+ + +
Sbjct: 55  ----MLSRRAFFDLSLNKTHLLNPQPSHRTRICGSSHGWLVMLDETPQIRLLNPLTRATR 110

Query: 135 HFP--FSSPRVLDYYHHPVLDLGNVFILHHSIPPPDYRDSIYKRKVVAAIAGEASILLTI 192
             P   + P V+ + H    ++G  +++ +   P     +   R++  +  G+       
Sbjct: 111 PLPPLHAFPNVVAFDH---ANVGREYLIQN---PYGGLYAFNLRQMCNSFLGK------- 157

Query: 193 HDSGKLAFFRSGGDCWTLIPVKQH--MPYDDVCVFKGRPCAVNSTGLTVAV---GSG--- 244
                LAF R+G D W  +  ++     ++DV  + G   AV S G T+AV   G G   
Sbjct: 158 ---NNLAFCRNGYDSWIFLNGEEEEMNCWEDVVNYNGLFFAV-SKGGTIAVCDAGEGCFP 213

Query: 245 PYMEVIAEPV---LGGDEKFLVESEGELLMV----DKHISSTCYENXXXXXXXXXXXXXX 297
           P + +I         GD  + V S G++L++    D+  S    E               
Sbjct: 214 PRVSIIQTTTPFGFAGDIHYAVFSAGDMLLLIRVLDQDFSDHAGEESDLVY--------- 264

Query: 298 RFEWSKPVKFDVYRLDEKEKMWVELESLGDRVLFLGHVCAFSASASDLGVRSGNCVVFAD 357
                + V F+V++++     W  +E+LG+RVLF+G   + S  ASD    S +C+ F D
Sbjct: 265 -----RTVGFEVFKMNWGLLTWQRVETLGERVLFVGGNSSLSFCASDFVGCSADCIYFTD 319


>Glyma16g22900.1 
          Length = 361

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 59/120 (49%), Gaps = 11/120 (9%)

Query: 262 LVESEGELLMVDKHISSTCYENXXXXXXXXXXXXXXRFEWSKPVKFDVYRLDEKEKMWVE 321
           LVES G L +VD++  S   E                 E+     F VY+LDE+   WV+
Sbjct: 181 LVESCGSLYVVDRYYGS---EPPRRRNYLGRADREAAVEY-----FKVYKLDEEWGTWVD 232

Query: 322 LESLGDRVLFLGHVCAFSASASDLGVRSGNCVVFADLTLKQGVGVFPLDVGWILLLSDIP 381
           ++ LGDR   LG+ C+FS SA +L    GNC+ F D+     V V+ LD   +  L  +P
Sbjct: 233 VKHLGDRAFVLGNCCSFSVSAKELMGYQGNCIYFMDIF---DVHVYNLDYCMVPYLFFMP 289


>Glyma09g19520.1 
          Length = 471

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 82/367 (22%), Positives = 147/367 (40%), Gaps = 57/367 (15%)

Query: 16  QKMQPPKSTAVDWSQLPTELLHLISERLDSPLYLLRFRSVCSTWRRSSSPAV--TPLHHF 73
           +K +  K    DWS LP  +L +++ERL + +  L    VC++W R     +     H F
Sbjct: 61  RKKELKKKNFADWSSLPRGILEMVAERL-TFIDCLSISKVCTSWNRVLGEELPRWQRHGF 119

Query: 74  P--LIFPTLSDDPASTVFLSQRTVFLIXXXXXXXXXXXXX-----LLVQIGQDLSGGTRL 126
           P  L+    + +  + + + +  V+ +                  ++V+   +      L
Sbjct: 120 PWLLVSDQQNKEIRTCISILENRVWELELSEAYGKYCWGSFCDWLIMVKKIDNFHLEVNL 179

Query: 127 FDPLSSHQHFPFSSPRVLDYYH---HPVLDLGNVFI---LHHSIPPPDY----RDSIYKR 176
            +P S  Q    S P + ++YH   H  L   N FI   LH       +     +S  K 
Sbjct: 180 LNPFSGRQ---ISLPLIWNFYHKMVHSGLPSENNFICMLLHSQYCELAFWVPGANSWRKH 236

Query: 177 KVVAAIAGEASILLTIHDSGKLAFFRSGGDCWTLIPVKQHMPYDDVCVFKGRPCAVNSTG 236
           K+      +A     +  +G       G + W  I V+    Y  +   KG       + 
Sbjct: 237 KLTGEPFEDA-----VFCNGSFYLLADGFNIWQ-IDVRS--IYSSIS--KGDDDFGTQSK 286

Query: 237 LTVAVGSGPYMEVIAEPVLGGDE------KFLVESEGELLMVDKHISSTCYENXXXXXXX 290
           +          E++ E ++  +       ++LVES GELL+V ++ S+   ++       
Sbjct: 287 IETQFLEVQRPEILQEGIILHNHHDYQILRYLVESCGELLLVCRYFSTK--QDAVL---- 340

Query: 291 XXXXXXXRFEWSKPVKFDVYRLDEKEKMWVELESLGDRVLFLGHVCAFSASASDLGVRSG 350
                       + +KF+VY LD  +  W ++E LGD+++FLG   + S SA +LG    
Sbjct: 341 ------------ETLKFEVYSLDFCQLSWKKVEDLGDQMIFLGKCSSTSFSAMELGAGIR 388

Query: 351 NCVVFAD 357
           N + F +
Sbjct: 389 NSIFFCN 395