Miyakogusa Predicted Gene

Lj3g3v3243150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3243150.1 Non Chatacterized Hit- tr|I1HYC6|I1HYC6_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,70,3e-19,HMA,Heavy metal-associated domain, HMA; no
description,NULL; HGSCAVENGER,Mercury scavenger protein; ,CUFF.45511.1
         (70 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g10760.1                                                       104   2e-23
Glyma03g21650.1                                                       103   5e-23
Glyma08g01680.1                                                        83   7e-17
Glyma19g32190.1                                                        80   4e-16
Glyma01g42790.1                                                        79   2e-15
Glyma01g42800.1                                                        72   1e-13
Glyma05g26330.1                                                        66   7e-12
Glyma08g09240.1                                                        65   2e-11
Glyma09g05710.1                                                        64   4e-11
Glyma15g17000.1                                                        62   1e-10

>Glyma16g10760.1 
          Length = 923

 Score =  104 bits (260), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/70 (74%), Positives = 62/70 (88%), Gaps = 1/70 (1%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           M CTSCS+SV +ALQM++GVKKA+VGLALEEAKV FDPNL++ +K+IEAIEDAGF ADLI
Sbjct: 106 MACTSCSESVVNALQMVEGVKKAIVGLALEEAKVHFDPNLINADKIIEAIEDAGFGADLI 165

Query: 61  NSRNDDMNKV 70
           +S N D NKV
Sbjct: 166 SSGN-DANKV 174


>Glyma03g21650.1 
          Length = 936

 Score =  103 bits (257), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 51/70 (72%), Positives = 62/70 (88%), Gaps = 1/70 (1%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           M CTSCS+SVE+ALQ+++GVKKA+VGLALEEAKV FDPNL + +K+IEAI+DAGF ADLI
Sbjct: 106 MACTSCSESVENALQIVEGVKKAIVGLALEEAKVHFDPNLTNVDKIIEAIDDAGFGADLI 165

Query: 61  NSRNDDMNKV 70
           +S N D NKV
Sbjct: 166 SSGN-DANKV 174


>Glyma08g01680.1 
          Length = 860

 Score = 82.8 bits (203), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 53/70 (75%), Gaps = 1/70 (1%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTCTSCS +VE ALQ I GV KA V LA EEA+V + PN+V  N+++EA+ED GF+A LI
Sbjct: 87  MTCTSCSSTVESALQSIQGVVKAQVALATEEAEVHYTPNVVTYNQILEAVEDTGFQATLI 146

Query: 61  NSRNDDMNKV 70
            S  +DM+++
Sbjct: 147 -STGEDMSRI 155



 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 44/65 (67%)

Query: 1  MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
          MTC++C+ SVE A++ + G+++AVV +    A+VLF P+ V+   + E IEDAGF+A  I
Sbjct: 10 MTCSACAASVEKAVKRLPGIRQAVVDVLNNRAQVLFYPSFVNEETIREVIEDAGFQATFI 69

Query: 61 NSRND 65
             N+
Sbjct: 70 RDDNE 74


>Glyma19g32190.1 
          Length = 938

 Score = 80.5 bits (197), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/70 (57%), Positives = 53/70 (75%), Gaps = 1/70 (1%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTCTSCS +VE ALQ I GV KA V LA EEA+V + PN+V  N+++EA+ED GF+A LI
Sbjct: 87  MTCTSCSSTVESALQSIQGVVKAQVALATEEAEVHYTPNVVTYNQILEAVEDTGFQATLI 146

Query: 61  NSRNDDMNKV 70
            S  +DM+++
Sbjct: 147 -STGEDMSRI 155



 Score = 61.6 bits (148), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 44/65 (67%)

Query: 1  MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
          MTC++C+ SVE A++ + G+++AVV +    A+VLF P+ V+   + E IEDAGF+A  I
Sbjct: 10 MTCSACAASVEKAVKRLPGIRQAVVDVLNNRAQVLFYPSFVNEETIREVIEDAGFQATFI 69

Query: 61 NSRND 65
             N+
Sbjct: 70 RDDNE 74


>Glyma01g42790.1 
          Length = 771

 Score = 78.6 bits (192), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/65 (55%), Positives = 51/65 (78%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           M+CTSCS ++E  LQ +DGV +A VGLA EEA+V ++P L+ TN +++AI+D+GFEA LI
Sbjct: 125 MSCTSCSSTLESVLQALDGVLEARVGLATEEAQVHYNPILLTTNHILQAIQDSGFEAQLI 184

Query: 61  NSRND 65
           +S  D
Sbjct: 185 SSSQD 189



 Score = 58.5 bits (140), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 3/70 (4%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           M+C +C+ SVE A++ + G+++A+V +    A V+F P+ V+   + EAIEDAGFEA L+
Sbjct: 49  MSCAACAGSVEKAVKRLPGIREAIVDVLNNRAHVIFYPSFVNVETIREAIEDAGFEAALL 108

Query: 61  NSRNDDMNKV 70
               DD   V
Sbjct: 109 ---TDDKKSV 115


>Glyma01g42800.1 
          Length = 950

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/62 (54%), Positives = 44/62 (70%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTCTSCS ++E ALQ + GV KA V L  EEA+V +DP +V  N  + AIE+ GFEA LI
Sbjct: 92  MTCTSCSSTIESALQSLHGVHKARVALTTEEAEVCYDPKIVTHNHFMSAIEETGFEAVLI 151

Query: 61  NS 62
           ++
Sbjct: 152 ST 153



 Score = 59.7 bits (143), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 46/66 (69%)

Query: 1  MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
          M+C +C+ S+E A++ + G+++AVV +   +A+VL+ P ++   ++ EAIEDAGFEA ++
Sbjct: 14 MSCAACAGSIEKAIKRLPGIREAVVDVLNHKAQVLYYPQMLHEQRIREAIEDAGFEAKVM 73

Query: 61 NSRNDD 66
             + D
Sbjct: 74 EEDSKD 79


>Glyma05g26330.1 
          Length = 994

 Score = 66.2 bits (160), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 43/66 (65%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTC +C  S+E  L+ ++GVK+AVV LA    +V +DPN++  + ++ AIEDAGFE   +
Sbjct: 134 MTCAACVNSIEGILRNLNGVKRAVVALATSLGEVEYDPNVISKDDIVAAIEDAGFEGTFV 193

Query: 61  NSRNDD 66
            S   D
Sbjct: 194 QSNGQD 199



 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 40/60 (66%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTC +CS SVE AL+ + G+ +A V L   +A V+F P LV    +  AIEDAGFEA+++
Sbjct: 51  MTCAACSNSVETALRSVHGITEASVALLQNKADVVFVPGLVKDEDIKNAIEDAGFEAEIL 110


>Glyma08g09240.1 
          Length = 994

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 43/66 (65%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTC +C  SVE  L+ ++GVK+AVV LA    +V +DP+++  + ++ AIEDAGFE   +
Sbjct: 134 MTCAACVNSVEGILRNLNGVKRAVVALATSLGEVEYDPHVISKDDIVSAIEDAGFEGAFV 193

Query: 61  NSRNDD 66
            S   D
Sbjct: 194 QSNGRD 199



 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTC +CS SV+ AL+ + GV +A V L   +A+V+F P LV    +  AIEDAGFEA+++
Sbjct: 51  MTCAACSNSVQTALRSVHGVTEASVALLQNKAEVVFIPGLVKDEDIKNAIEDAGFEAEIL 110


>Glyma09g05710.1 
          Length = 986

 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 43/66 (65%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTC +C  SVE  L+ + GVK+AVV LA    +V +DP+++  + ++ AIED+GF+  LI
Sbjct: 125 MTCAACVNSVEGILRNLPGVKRAVVALATSSGEVEYDPSVISKDDIVNAIEDSGFDGSLI 184

Query: 61  NSRNDD 66
            S   D
Sbjct: 185 ESNEQD 190



 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 40/60 (66%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTC +CS SVE AL+ +DGV  A V L   +A V+F+  L+    +  AIEDAGFEAD++
Sbjct: 46  MTCAACSNSVESALKSLDGVISASVALLQNKADVVFNSALLKDEDIKNAIEDAGFEADIL 105


>Glyma15g17000.1 
          Length = 996

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 42/66 (63%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTC +C  SVE  L+ + GV++AVV LA    +V +DP+++  + ++ AIED+GF+   I
Sbjct: 135 MTCAACVNSVEGILRNLPGVRRAVVALATSSGEVEYDPSVISKDDIVNAIEDSGFDGSFI 194

Query: 61  NSRNDD 66
            S   D
Sbjct: 195 QSNEQD 200



 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 40/60 (66%)

Query: 1   MTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLI 60
           MTC +CS SVE AL+ +DGV  A V L   +A V+F+  L+    +  AIEDAGFEAD++
Sbjct: 53  MTCAACSNSVESALKSLDGVISASVALLQNKADVVFNTALLKDEDIKNAIEDAGFEADIL 112