Miyakogusa Predicted Gene
- Lj3g3v3237920.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3237920.2 Non Chatacterized Hit- tr|I1LQJ5|I1LQJ5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.16810
PE,82.31,0,MMR_HSR1,GTP binding domain; no description,NULL; no
description,K homology domain-like, alpha/beta;,CUFF.45517.2
(647 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma12g06150.1 963 0.0
Glyma11g14170.1 682 0.0
Glyma11g30440.1 208 1e-53
Glyma07g40160.1 201 2e-51
Glyma17g00640.1 110 7e-24
Glyma04g11560.1 82 2e-15
Glyma06g11130.1 82 3e-15
Glyma16g24870.1 57 6e-08
>Glyma12g06150.1
Length = 632
Score = 963 bits (2489), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/633 (78%), Positives = 537/633 (84%), Gaps = 15/633 (2%)
Query: 3 TLFQLHVSLAKTLNXXXXXXXXXXXXA--LSPRKSIFIPRRSLSRPVLRFSSAEFSGSVD 60
TL + +LAKTLN + LS +K + RRSLSR VLR ++ E SGSVD
Sbjct: 6 TLTPISFTLAKTLNPIFPFHNTLPFSSSILSRQK---LTRRSLSRSVLRPTAGELSGSVD 62
Query: 61 DDEEPDQFDYPEEXXXXXXXLALEQEAKDAVLEYSSSLDHVLTIEDE--IDLKETAQTHX 118
DDEE + D +ALEQEAKDAV YSSSL +L+IEDE D KE+AQ+
Sbjct: 63 DDEESGELD-------DLDLVALEQEAKDAVEAYSSSLSQILSIEDEEKSDRKESAQSRR 115
Query: 119 XXXXXXXXIIPDRLLPRVAIVGRPNVGKSALFNRFVGGNKAIVVDEPGVTRDRLYGRSYW 178
IIPD LLPRVAIVGRPNVGKSALFNR VGGN+AIVVDEPGVTRDRLYGRSYW
Sbjct: 116 KSPRRTK-IIPDNLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSYW 174
Query: 179 GEHEFMVVDTGGVLTVSKSQSAVMEELAITTTIGMDGIPLVSREAAVARMPSMIERQATA 238
GEHEFMVVDTGGV+TVSKSQ+ VMEELAITTTIGMDGIPL REAAVARMPSMIERQATA
Sbjct: 175 GEHEFMVVDTGGVITVSKSQATVMEELAITTTIGMDGIPLAVREAAVARMPSMIERQATA 234
Query: 239 AIEESSVIVFVVDGQAGLTAADEEIADWLRKYYSKKYIILAVNKCESPRKRIMQASEFWS 298
A+EESSVI+F+VDGQAGLTAADEEIADWLRK YS KY+ILAVNKCESPRKRIMQASEFWS
Sbjct: 235 AVEESSVIIFLVDGQAGLTAADEEIADWLRKNYSDKYVILAVNKCESPRKRIMQASEFWS 294
Query: 299 LGFEPIPISAISGTGTGELLDLVCSGLKKVEEPKNLDEEDYVPSISIVGRPNVGKSSILN 358
LGFEP+PISAISGTGTGELLDLVCSGL+K+EE NL EEDYVP+ISIVGRPNVGKSSILN
Sbjct: 295 LGFEPLPISAISGTGTGELLDLVCSGLQKIEESNNLVEEDYVPAISIVGRPNVGKSSILN 354
Query: 359 ALVGEDRTIVSPISGTTRDAIDTEFTGVDGQKFRLIDTAGIRRRAAVVSAGSTTEALSGN 418
ALVGEDRTIVSPISGTTRDAIDTEFTG DGQKF+LIDTAGIR+R A+ SAGSTTEALS N
Sbjct: 355 ALVGEDRTIVSPISGTTRDAIDTEFTGPDGQKFQLIDTAGIRKRTAIASAGSTTEALSVN 414
Query: 419 RAFRAIRRSDIVALVIEALSCITEQDFKIAERIEKEGKGCVIVVNKWDTIPNKNQQTATY 478
RAFRAIRRSD+VALVIEA++CITEQD+KIAERIEKEGKGCVIVVNKWDTIPNKNQQTA+Y
Sbjct: 415 RAFRAIRRSDVVALVIEAMACITEQDYKIAERIEKEGKGCVIVVNKWDTIPNKNQQTASY 474
Query: 479 YEQDVREKLRGLDWAPIVYSTAIAGQSVDKIIDAASEVEKERSRRLGTSILNQVVREALA 538
YEQDVREKLR L WAPIVYSTA+AG SVDKII AA EVEKERSRRLGTSILNQVV+EA+
Sbjct: 475 YEQDVREKLRSLVWAPIVYSTAVAGHSVDKIIVAAIEVEKERSRRLGTSILNQVVQEAVG 534
Query: 539 FXXXXXXXXXXXXXVYYCTQAAIRPPTFVFFVNDSKLFPETYRRYMEKQLRMDAGFSGTP 598
F VYYCTQAAIRPPTFVFFVND+KLFPETYRRYMEKQLR DAGFSGTP
Sbjct: 535 FKPPPRTRGGKRGRVYYCTQAAIRPPTFVFFVNDAKLFPETYRRYMEKQLRTDAGFSGTP 594
Query: 599 IRLLWRSRRKMGRDEDKAATRTQENLTSNDRKI 631
IRLLWRSRRKMG+DE K T+T+ENLTSNDRK+
Sbjct: 595 IRLLWRSRRKMGKDEGKPVTKTRENLTSNDRKL 627
>Glyma11g14170.1
Length = 430
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/448 (76%), Positives = 373/448 (83%), Gaps = 29/448 (6%)
Query: 156 GNKAIVVDEPGVTRDRLYGRSYWGEHEFMVVDTGGVLTVSKSQSAVMEELAITTTIGMDG 215
GN+AIVVDEPGVTRDRLYGRSYWGEHEFMVVDTGGV+TVSKSQ+ VMEELAITTTIGMDG
Sbjct: 1 GNRAIVVDEPGVTRDRLYGRSYWGEHEFMVVDTGGVITVSKSQATVMEELAITTTIGMDG 60
Query: 216 IPLVSREAAVARMPSMIERQATAAIEESSVIVFVVDGQAGLTAADEEIADWLRKYYSKKY 275
IPL REAAVA MPSMIERQATAA+EESSVI+F+VDGQAGLTAADEEIADWLRK YS KY
Sbjct: 61 IPLAVREAAVAWMPSMIERQATAAVEESSVIIFLVDGQAGLTAADEEIADWLRKKYSDKY 120
Query: 276 IILAVNKCESPRKRIMQASEFWSLGFEPIPISAISGTGTGELLDLVCSGLKKVEEPKNL- 334
+ILAVNKCESPRKRIMQASEFWSLG+ + LDLV + V +P ++
Sbjct: 121 VILAVNKCESPRKRIMQASEFWSLGYRTVICK----------LDLVLHLIINVYKPLSMS 170
Query: 335 --------DEEDYVPSISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGV 386
+EEDYVP+ISIVGRPNVGKSSILNALVGEDRTIVSPIS TTRDAIDTEFTG
Sbjct: 171 DHKSNNLVEEEDYVPAISIVGRPNVGKSSILNALVGEDRTIVSPISCTTRDAIDTEFTGP 230
Query: 387 DGQKFRLIDTAGIRRRAAVVSAGSTTEALSGNRAFRAIRRSDIVALVIEALSCITEQDFK 446
DGQKF+LIDTAGIR+R+A+ SAG+ F AIRRSD+VALVIEA++CITEQ++
Sbjct: 231 DGQKFQLIDTAGIRKRSAIASAGT----------FCAIRRSDVVALVIEAMACITEQEYN 280
Query: 447 IAERIEKEGKGCVIVVNKWDTIPNKNQQTATYYEQDVREKLRGLDWAPIVYSTAIAGQSV 506
IAERIEKEGKGCVIVVNKWDTIPNKNQQTA+YYEQDVREKLR LDWAPIVYST +AG SV
Sbjct: 281 IAERIEKEGKGCVIVVNKWDTIPNKNQQTASYYEQDVREKLRSLDWAPIVYSTVVAGHSV 340
Query: 507 DKIIDAASEVEKERSRRLGTSILNQVVREALAFXXXXXXXXXXXXXVYYCTQAAIRPPTF 566
KII AASEVEKERSRRLGTS LNQVV+EA+ F VYYCTQAAI+PPTF
Sbjct: 341 GKIIVAASEVEKERSRRLGTSTLNQVVQEAVGFKPPPRTRGGKGGRVYYCTQAAIKPPTF 400
Query: 567 VFFVNDSKLFPETYRRYMEKQLRMDAGF 594
VFFVND KLFPETYRRYMEKQ R DAGF
Sbjct: 401 VFFVNDGKLFPETYRRYMEKQHRSDAGF 428
>Glyma11g30440.1
Length = 227
Score = 208 bits (530), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/164 (66%), Positives = 125/164 (76%), Gaps = 14/164 (8%)
Query: 275 YIILAVNKCESPRKRIMQASEFWSLGFEPIPISAISGTGTGELLDLVCSGLKKVEEPKNL 334
Y IL +KC + F+P+PISAISGTGT EL+DLV L+K+EE NL
Sbjct: 42 YCILMFSKCH--------------MLFQPLPISAISGTGTAELIDLVYCRLQKIEESNNL 87
Query: 335 DEEDYVPSISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGVDGQKFRLI 394
EEDYV +ISIVGRPNV KS+ILNALVGEDRTI SPISGTTRDAIDTEFTG DGQKF+LI
Sbjct: 88 VEEDYVLAISIVGRPNVAKSTILNALVGEDRTIGSPISGTTRDAIDTEFTGPDGQKFQLI 147
Query: 395 DTAGIRRRAAVVSAGSTTEALSGNRAFRAIRRSDIVALVIEALS 438
DTAGI++ + SAG TTEALS NRAFRAI R D+V LVIEA++
Sbjct: 148 DTAGIKKITTIASAGITTEALSVNRAFRAICRFDVVVLVIEAMA 191
>Glyma07g40160.1
Length = 545
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 158/513 (30%), Positives = 252/513 (49%), Gaps = 83/513 (16%)
Query: 133 LPRVAIVGRPNVGKSALFNRFVGGNKAIVVDEP--GVTRDRLYGRSYWGEHEFMVVDTGG 190
LP V I+GRPNVGKSALFNR + +A+V + P VTRD G + + F V+D+ G
Sbjct: 41 LPTVVILGRPNVGKSALFNRLIRRREALVYNTPDDHVTRDIREGLAKLADLRFRVLDSAG 100
Query: 191 VLTVSKSQSAVMEELAITTTIGMDGIPLVSREAAVARMPSMIERQATAAIEESSVIVFVV 250
+ + S S + +IT + + +S +F+
Sbjct: 101 LEAEATSASILHRTASITAHV----------------------------LAKSHFALFLT 132
Query: 251 DGQAGLTAADEEIADWLRKYYSKKYIILAVNKCES----PRKRIMQASEFWSLGF-EPIP 305
D +AGL D ++ WLRK+ + I+A+NK ES A+E LGF +PI
Sbjct: 133 DARAGLHPLDLQVGKWLRKHAPQIKPIVAMNKSESLFDATGSLASAANEMCRLGFGDPIA 192
Query: 306 ISAISGTGTGELLDLVCSGLK------------------KVEEPKNLD-EEDYVP-SISI 345
ISA +G G +L + L+ +VE+ +LD ++ +P ++I
Sbjct: 193 ISAETGLGMHDLYMSLKPLLEDYMLRVFTEEGARENSHNEVEDSSDLDVDKSKLPLQLAI 252
Query: 346 VGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGVDGQKFRLIDTAGIRRRAAV 405
VGRPNVGKS++LNAL+ EDR +V P +G TRD+I T+F G+ L+DTAG +R
Sbjct: 253 VGRPNVGKSTLLNALLQEDRVLVGPEAGLTRDSIRTQFE-FQGRTIYLVDTAGWLQRTKQ 311
Query: 406 VSAGSTTEALSGNRAFRAIRRSDIVALVIEALSCIT------EQDFKIAERIEKEGKGCV 459
++ LS ++ +++ R+ I+ALV++A I + IA R +EG+G V
Sbjct: 312 EKGAAS---LSIMQSRKSLLRAHIIALVLDAEEIINARRSMKHAEVVIARRAVEEGRGLV 368
Query: 460 IVVNKWDTIPNKNQQTATYYE-------QDVREKLRGLDWAPIVYSTAIAGQSVDKIIDA 512
++VNK D + K++ ++ YE Q+++ + + P+V+ +A+ G+ +++
Sbjct: 369 VIVNKMDLLRGKHKSSS--YEKVMEVVPQEIQTIIPQVTGIPVVFISALEGRGRTTVLNQ 426
Query: 513 ASEVEKERSRRLGTSILNQVVREALAFXXXXXXXXXXXXXVYYCTQAAIRPPTFVFFVND 572
+ ++ RL T+ LN+ V Y TQ RPPTFV FV
Sbjct: 427 VIDTYEKWCSRLPTARLNR---------WHSWKDQAAQPKVKYFTQVKARPPTFVAFVRG 477
Query: 573 SKLFPETYRRYMEKQLRMDAGFSGTPIRLLWRS 605
+T R++ K L+ D G PIR++ RS
Sbjct: 478 KTQLSDTDIRFLTKSLKEDFDLGGIPIRIMQRS 510
>Glyma17g00640.1
Length = 308
Score = 110 bits (274), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 163/319 (51%), Gaps = 47/319 (14%)
Query: 327 KVEEPKNLD-EEDYVP-SISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFT 384
+VE+ +LD ++ +P ++I+GRPNVGKS++LNAL+ ED +V P +G TRD+I T+F
Sbjct: 10 EVEDSCDLDVDKSKLPLQLAILGRPNVGKSTLLNALLQEDHVLVGPEAGLTRDSIRTQFE 69
Query: 385 GVDGQKFRLIDTAGIRRRAAVVSAGSTTEALSGNRAFRAIRRSDIVALVIEALSCIT-EQ 443
G+ L+DTAG + +T + +R +++ ++ I+ALV++A I +
Sbjct: 70 -FQGRTIYLVDTAGWLQM-------QSTPGIMQSR--KSLLQAHIIALVLDAEEIINARR 119
Query: 444 DFKIAERI-----EKEGKGCVIVVNKWDTIPNKNQQTATYYE------QDVREKLRGLDW 492
K AE I +EG+G V++VNK + +P Q+++Y + Q+++ + +
Sbjct: 120 SMKHAEVIIARWAVEEGRGLVVIVNKMN-LPRGKHQSSSYEKVMEIVPQEIQTIIPQVKG 178
Query: 493 APIVYSTAIAGQSVDKIIDAASEVEKERSRRLGTSILNQVVREALAFXXXXXXXXXXXXX 552
P+V+ +A+ G+ +++ E E+ + + S+L+ V ++
Sbjct: 179 IPVVFISALEGRGRTTVLNQVIET-YEKWQLVHPSLLSVTVMSRHSW-----KGQAAQPK 232
Query: 553 VYYCTQAAIRPPTFVFFVNDSKLFPETYRRYMEKQLRMDAGFSGTPIRLLWRSRRKMGRD 612
V Y TQ RPPTFV F + K L+ + G PIRL+ R K +D
Sbjct: 233 VKYFTQVKARPPTFVAF--------------LTKSLKENFDLGGIPIRLMQRFVTK--KD 276
Query: 613 EDKAATRTQENLTSNDRKI 631
+ TRT +N S R I
Sbjct: 277 ASGSETRTSKNSHSVGRVI 295
>Glyma04g11560.1
Length = 587
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 96/181 (53%), Gaps = 23/181 (12%)
Query: 343 ISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGVDGQKFRLIDTAGIRRR 402
I+IVGRPNVGKSS+LNA +R IV+ I+GTTRD I+ + V G L+DTAGIR
Sbjct: 342 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASIS-VSGIPITLLDTAGIRDT 400
Query: 403 AAVVSAGSTTEALSGNRAFRAIRRSDIVALVIEALSCITEQDFKIAERIEKEGKG----- 457
+V E + R+ R +D++ + + A+ T +D K+ ERI+ KG
Sbjct: 401 DDIV------EKIGVERSEAVARGADLIIMTMSAVEGWTSEDTKLLERIQST-KGSTGSS 453
Query: 458 --CVIVVNKWDTIPNKNQQTATYYEQDVREKLRGLDWAPIVYSTAIAGQSVDKIIDAASE 515
++VVNK D P T +++ + + ++ V++ A+ GQ + + A +
Sbjct: 454 TPVILVVNKIDCKPCAE----TEWDKGCQNHI----FSKHVFTCAVTGQGLHDLEGAVLQ 505
Query: 516 V 516
+
Sbjct: 506 I 506
>Glyma06g11130.1
Length = 398
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 93/174 (53%), Gaps = 23/174 (13%)
Query: 343 ISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGVDGQKFRLIDTAGIRRR 402
I+IVGRPNVGKSS+LNA +R IV+ I+GTTRD I+ + V G L+DTAGIR
Sbjct: 153 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASIS-VSGIPITLLDTAGIRDT 211
Query: 403 AAVVSAGSTTEALSGNRAFRAIRRSDIVALVIEALSCITEQDFKIAERIEKEGKG----- 457
+V E + R+ R +D++ + + A+ T +D K+ ERI+ KG
Sbjct: 212 DDIV------EKIGVERSEAVARGADLIIMTVSAVEGWTSEDTKLLERIQST-KGSTGSS 264
Query: 458 --CVIVVNKWDTIPNKNQQTATYYEQDVREKLRGLDWAPIVYSTAIAGQSVDKI 509
++VVNK D P T +++ + + ++ V++ A+ GQ + +
Sbjct: 265 TPVILVVNKIDCKPCAE----TKWDKGCQSHI----FSKRVFTCAVTGQGLHDL 310
>Glyma16g24870.1
Length = 428
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 33/201 (16%)
Query: 129 PDRLLPRVAIVGRPNVGKSALFNRFVGGNKAIVVDEPGVTRDRLYGRSYWGEHEFMVVDT 188
PD VA++G+PNVGKS L N+ +G +IV D+P TR R+ +++ ++ DT
Sbjct: 126 PDHRSGYVALLGKPNVGKSTLANQMLGQKLSIVTDKPQTTRHRILCICSGTDYQMILYDT 185
Query: 189 GGVLTVSKSQSAVMEELAITTTIGMDGIPLVSREAAVARMPSMIERQATAAIEESSVIVF 248
GVL +E+ + ++ M + R AAV + ++
Sbjct: 186 PGVL---------QKEMHLLDSMMMKNV----RSAAV----------------NADCVLV 216
Query: 249 VVDGQAGLTAADEEIADWLRKYYSKKYIILAVNKCESPRKRIMQASEFWSLGF----EPI 304
+VD + D + + + K +L +NK + + + W F E I
Sbjct: 217 LVDARKTPEKIDGLLEEGIGDLKDKPPTLLILNKKDLVKPGELAKKLEWYEKFTEVDEVI 276
Query: 305 PISAISGTGTGELLDLVCSGL 325
P+SA G G ++ D + S L
Sbjct: 277 PVSAKYGQGVEDVKDWILSKL 297